Protein–RNA interactions for Protein: P10155

TROVE2, 60 kDa SS-A/Ro ribonucleoprotein, humanhuman

Known RBP eCLIP

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2P10155 RPS20-209ENST00000521289 737 ntTSL 59.02□□□□□ -0.971e-323■■□□□ 13
TROVE2P10155 RPS20-212ENST00000618656 627 ntTSL 3 BASIC8.51□□□□□ -1.051e-323■■□□□ 13
TROVE2P10155 RPS20-207ENST00000520627 423 ntTSL 5 BASIC8.2□□□□□ -1.11e-323■■□□□ 13
TROVE2P10155 RPS20-206ENST00000520490 402 ntTSL 37.57□□□□□ -1.21e-323■■□□□ 13
TROVE2P10155 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.231e-323■■□□□ 13
TROVE2P10155 RPS20-204ENST00000519606 424 ntTSL 3 BASIC7.36□□□□□ -1.231e-323■■□□□ 13
TROVE2P10155 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.19□□□□□ -1.261e-323■■□□□ 13
TROVE2P10155 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.48□□□□□ -1.371e-323■■□□□ 13
TROVE2P10155 SNORD54-201ENST00000459159 67 ntBASIC-2.37□□□□□ -2.791e-323■■□□□ 13
TROVE2P10155 ANKRD11-213ENST00000567736 2750 ntTSL 215.63■□□□□ 0.091e-6■■□□□ 12.9
TROVE2P10155 SEPT9-227ENST00000590059 670 ntTSL 519.81■□□□□ 0.761e-6■■□□□ 12.9
TROVE2P10155 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.471e-6■■□□□ 12.9
TROVE2P10155 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.96■□□□□ 0.151e-6■■□□□ 12.9
TROVE2P10155 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.82■□□□□ 0.121e-6■■□□□ 12.9
TROVE2P10155 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC12.67□□□□□ -0.381e-6■■□□□ 12.9
TROVE2P10155 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.753e-6■■□□□ 12.9
TROVE2P10155 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.433e-6■■□□□ 12.9
TROVE2P10155 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.666e-22■■□□□ 12.9
TROVE2P10155 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.4□□□□□ -2.186e-22■■□□□ 12.9
TROVE2P10155 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.33■□□□□ 0.841e-7■■□□□ 12.9
TROVE2P10155 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.375e-7■■□□□ 12.9
TROVE2P10155 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.63■□□□□ 0.255e-7■■□□□ 12.9
TROVE2P10155 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.061e-7■■□□□ 12.9
TROVE2P10155 PI4KB-205ENST00000430800 965 ntTSL 514.4□□□□□ -0.11e-7■■□□□ 12.9
TROVE2P10155 PI4KB-211ENST00000489223 558 ntTSL 413.71□□□□□ -0.211e-7■■□□□ 12.9
TROVE2P10155 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.221e-7■■□□□ 12.9
TROVE2P10155 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.321e-7■■□□□ 12.9
TROVE2P10155 PI4KB-202ENST00000368873 3340 ntTSL 2 BASIC13.07□□□□□ -0.321e-7■■□□□ 12.9
TROVE2P10155 PPFIA3-211ENST00000602848 1638 ntTSL 1 (best)22.22■■□□□ 1.158e-7■■□□□ 12.8
TROVE2P10155 PPFIA3-212ENST00000602897 1615 ntTSL 222.22■■□□□ 1.158e-7■■□□□ 12.8
TROVE2P10155 TSC22D4-206ENST00000496728 837 ntTSL 318.6■□□□□ 0.578e-7■■□□□ 12.8
TROVE2P10155 PPFIA3-209ENST00000602783 980 ntTSL 1 (best)18.41■□□□□ 0.548e-7■■□□□ 12.8
TROVE2P10155 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.31■□□□□ 0.528e-7■■□□□ 12.8
TROVE2P10155 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.478e-7■■□□□ 12.8
TROVE2P10155 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.278e-7■■□□□ 12.8
TROVE2P10155 TSC22D4-203ENST00000423266 1071 ntTSL 215.87■□□□□ 0.138e-7■■□□□ 12.8
TROVE2P10155 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.87■□□□□ 0.138e-7■■□□□ 12.8
TROVE2P10155 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.954e-8■■□□□ 12.7
TROVE2P10155 BCAR1-222ENST00000569340 714 ntTSL 311.91□□□□□ -0.52e-6■■□□□ 12.7
TROVE2P10155 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC9.53□□□□□ -0.889e-9■■□□□ 12.7
TROVE2P10155 CALR-203ENST00000586803 667 ntTSL 211.86□□□□□ -0.516e-37■■□□□ 12.7
TROVE2P10155 ZFPM1-202ENST00000562417 497 ntTSL 316.37■□□□□ 0.215e-7■■□□□ 12.6
TROVE2P10155 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.353e-7■■□□□ 12.6
TROVE2P10155 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC11.82□□□□□ -0.523e-7■■□□□ 12.6
TROVE2P10155 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC10.06□□□□□ -0.83e-7■■□□□ 12.6
TROVE2P10155 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC9.38□□□□□ -0.913e-7■■□□□ 12.6
TROVE2P10155 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.61□□□□□ -1.193e-7■■□□□ 12.6
TROVE2P10155 RNY1-201ENST00000364228 113 ntBASIC0.26□□□□□ -2.374e-9■■□□□ 12.6
TROVE2P10155 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.28■□□□□ 0.21e-6■■□□□ 12.6
TROVE2P10155 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.441e-6■■□□□ 12.6
TROVE2P10155 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.532e-6■■□□□ 12.6
TROVE2P10155 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.24■□□□□ 0.352e-6■■□□□ 12.6
TROVE2P10155 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.182e-6■■□□□ 12.6
TROVE2P10155 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.17■□□□□ 0.182e-6■■□□□ 12.6
TROVE2P10155 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.172e-6■■□□□ 12.6
TROVE2P10155 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.022e-6■■□□□ 12.6
TROVE2P10155 BCAR1-211ENST00000562556 4659 ntTSL 214.47□□□□□ -0.092e-6■■□□□ 12.6
TROVE2P10155 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.282e-6■■□□□ 12.6
TROVE2P10155 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.23e-6■■□□□ 12.5
TROVE2P10155 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.68■■□□□ 1.381e-6■■□□□ 12.5
TROVE2P10155 SHANK2-220ENST00000608988 1879 ntTSL 523.67■■□□□ 1.381e-6■■□□□ 12.5
TROVE2P10155 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)21.75■■□□□ 1.071e-6■■□□□ 12.5
TROVE2P10155 RBM17-203ENST00000432931 805 ntTSL 318.88■□□□□ 0.611e-6■■□□□ 12.5
TROVE2P10155 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.565e-6■■□□□ 12.5
TROVE2P10155 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.49■□□□□ 0.551e-6■■□□□ 12.5
TROVE2P10155 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.51e-6■■□□□ 12.5
TROVE2P10155 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.53e-6■■□□□ 12.5
TROVE2P10155 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.51e-6■■□□□ 12.5
TROVE2P10155 C7orf50-208ENST00000491163 621 ntAPPRIS ALT2 TSL 317.99■□□□□ 0.473e-6■■□□□ 12.5
TROVE2P10155 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.473e-6■■□□□ 12.5
TROVE2P10155 C7orf50-207ENST00000488073 853 ntTSL 516.68■□□□□ 0.263e-6■■□□□ 12.5
TROVE2P10155 RBM17-204ENST00000437845 833 ntTSL 316.4■□□□□ 0.221e-6■■□□□ 12.5
TROVE2P10155 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.25□□□□□ -0.131e-6■■□□□ 12.5
TROVE2P10155 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.38□□□□□ -0.271e-6■■□□□ 12.5
TROVE2P10155 ACTN4-211ENST00000589528 441 ntTSL 212.53□□□□□ -0.41e-6■■□□□ 12.5
TROVE2P10155 PCNT-205ENST00000480896 10485 ntTSL 1 (best)11.96□□□□□ -0.51e-6■■□□□ 12.5
TROVE2P10155 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.541e-6■■□□□ 12.5
TROVE2P10155 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.581e-6■■□□□ 12.5
TROVE2P10155 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.891e-6■■□□□ 12.5
TROVE2P10155 ACTN4-207ENST00000495553 586 ntTSL 59.16□□□□□ -0.941e-6■■□□□ 12.5
TROVE2P10155 RBM17-202ENST00000418631 792 ntTSL 28.67□□□□□ -1.021e-6■■□□□ 12.5
TROVE2P10155 RBM17-206ENST00000447032 676 ntTSL 27.47□□□□□ -1.211e-6■■□□□ 12.5
TROVE2P10155 UXS1-215ENST00000497604 2907 ntTSL 26.98□□□□□ -1.291e-6■■□□□ 12.5
TROVE2P10155 RBM17-209ENST00000467214 389 ntTSL 22.8□□□□□ -1.961e-6■■□□□ 12.5
TROVE2P10155 SLC16A3-218ENST00000583444 2882 nt19.97■□□□□ 0.791e-7■■□□□ 12.5
TROVE2P10155 BCAR1-210ENST00000561970 594 ntTSL 426.23■■□□□ 1.792e-6■■□□□ 12.5
TROVE2P10155 BCAR1-213ENST00000563323 558 ntTSL 317.94■□□□□ 0.462e-6■■□□□ 12.5
TROVE2P10155 BCAR1-221ENST00000569006 574 ntTSL 413.22□□□□□ -0.292e-6■■□□□ 12.5
TROVE2P10155 BCAR1-215ENST00000564028 558 ntTSL 412.91□□□□□ -0.342e-6■■□□□ 12.5
TROVE2P10155 BCAR1-220ENST00000568864 556 ntTSL 412.7□□□□□ -0.382e-6■■□□□ 12.5
TROVE2P10155 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.132e-6■■□□□ 12.5
TROVE2P10155 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.75■□□□□ 0.912e-6■■□□□ 12.5
TROVE2P10155 PTP4A3-205ENST00000523147 558 ntTSL 518.4■□□□□ 0.542e-6■■□□□ 12.5
TROVE2P10155 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.77■□□□□ 0.762e-6■■□□□ 12.5
TROVE2P10155 NEK6-209ENST00000444973 790 ntTSL 523.75■■□□□ 1.392e-6■■□□□ 12.5
TROVE2P10155 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.052e-6■■□□□ 12.4
TROVE2P10155 HNRNPA1-205ENST00000547566 1234 ntTSL 1 (best)13.57□□□□□ -0.245e-11■■□□□ 12.4
TROVE2P10155 HNRNPA1-203ENST00000546500 4121 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.685e-11■■□□□ 12.4
TROVE2P10155 HNRNPA1-211ENST00000551665 925 ntTSL 28.46□□□□□ -1.065e-11■■□□□ 12.4
TROVE2P10155 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.7□□□□□ -1.55e-11■■□□□ 12.4
Retrieved 100 of 4,203 protein–RNA pairs in 154.1 ms