RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
TCEA3-201ENST00000374601 CCDC180Q9P1Z9 1646 aa29.43■■■□□ 2.3
TCEA3-201ENST00000374601 ABCC9O60706 1549 aa28.13■■■□□ 2.09
TCEA3-201ENST00000374601 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
TCEA3-201ENST00000374601 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
TCEA3-201ENST00000374601 MYO15BQ96JP2 1530 aa27.45■■□□□ 1.98
TCEA3-201ENST00000374601 NACADO15069 1562 aa27.44■■□□□ 1.98
TCEA3-201ENST00000374601 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.98
TCEA3-201ENST00000374601 RB1CC1Q8TDY2 1594 aa27.34■■□□□ 1.97
TCEA3-201ENST00000374601 UNC13AQ9UPW8 1703 aa26.92■■□□□ 1.9
TCEA3-201ENST00000374601 SCRIBQ14160 1630 aa26.87■■□□□ 1.89
TCEA3-201ENST00000374601 SHROOM4Q9ULL8 1493 aa26.59■■□□□ 1.85
TCEA3-201ENST00000374601 BICRAQ9NZM4 1560 aa26.57■■□□□ 1.84
TCEA3-201ENST00000374601 PABPN1Q86U42 306 aaKnown RBP eCLIP26.32■■□□□ 1.8
TCEA3-201ENST00000374601 CECR2Q9BXF3 1484 aa25.86■■□□□ 1.73
TCEA3-201ENST00000374601 EIF4G1Q04637 1599 aaKnown RBP25.77■■□□□ 1.72
TCEA3-201ENST00000374601 SMARCA4P51532 1647 aa25.76■■□□□ 1.71
TCEA3-201ENST00000374601 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
TCEA3-201ENST00000374601 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
TCEA3-201ENST00000374601 CC2D2AQ9P2K1 1620 aa25.54■■□□□ 1.68
TCEA3-201ENST00000374601 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
TCEA3-201ENST00000374601 WIZO95785 1651 aa25.48■■□□□ 1.67
TCEA3-201ENST00000374601 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
TCEA3-201ENST00000374601 SMARCA2P51531 1590 aa25.4■■□□□ 1.66
TCEA3-201ENST00000374601 ATAD2BQ9ULI0 1458 aa25.4■■□□□ 1.66
TCEA3-201ENST00000374601 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
TCEA3-201ENST00000374601 NCAPD3P42695 1498 aa25.27■■□□□ 1.64
TCEA3-201ENST00000374601 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
TCEA3-201ENST00000374601 SUPT5HO00267 1087 aaKnown RBP25.23■■□□□ 1.63
TCEA3-201ENST00000374601 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
TCEA3-201ENST00000374601 TOP2AP11388 1531 aaKnown RBP25.2■■□□□ 1.62
TCEA3-201ENST00000374601 CCDC88BA6NC98 1476 aa24.86■■□□□ 1.57
TCEA3-201ENST00000374601 PRDM2Q13029 1718 aa24.62■■□□□ 1.53
TCEA3-201ENST00000374601 LAMC3Q9Y6N6 1575 aa24.56■■□□□ 1.52
TCEA3-201ENST00000374601 NESP48681 1621 aa24.55■■□□□ 1.52
TCEA3-201ENST00000374601 CFTRP13569 1480 aa24.55■■□□□ 1.52
TCEA3-201ENST00000374601 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
TCEA3-201ENST00000374601 KIF21AQ7Z4S6 1674 aa24.38■■□□□ 1.49
TCEA3-201ENST00000374601 FANCD2Q9BXW9 1451 aa24.3■■□□□ 1.48
TCEA3-201ENST00000374601 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
TCEA3-201ENST00000374601 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
TCEA3-201ENST00000374601 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
TCEA3-201ENST00000374601 ERCC6Q03468 1493 aa24.16■■□□□ 1.46
TCEA3-201ENST00000374601 THOC2Q8NI27 1593 aaKnown RBP24.12■■□□□ 1.45
TCEA3-201ENST00000374601 SYNJ1O43426 1573 aa24.08■■□□□ 1.44
TCEA3-201ENST00000374601 MRC2Q9UBG0 1479 aa24.07■■□□□ 1.44
TCEA3-201ENST00000374601 CUX1P39880 1505 aa24.07■■□□□ 1.44
TCEA3-201ENST00000374601 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
TCEA3-201ENST00000374601 BIVM-ERCC5R4GMW8 1640 aa24.06■■□□□ 1.44
TCEA3-201ENST00000374601 DNMBPQ6XZF7 1577 aa24.05■■□□□ 1.44
TCEA3-201ENST00000374601 WRNQ14191 1432 aaPredicted RBP eCLIP24.05■■□□□ 1.44
TCEA3-201ENST00000374601 WDR62O43379 1518 aa24.02■■□□□ 1.44
TCEA3-201ENST00000374601 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
TCEA3-201ENST00000374601 TOPBP1Q92547 1522 aa24■■□□□ 1.43
TCEA3-201ENST00000374601 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
TCEA3-201ENST00000374601 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
TCEA3-201ENST00000374601 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
TCEA3-201ENST00000374601 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
TCEA3-201ENST00000374601 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
TCEA3-201ENST00000374601 CUX2O14529 1486 aa23.77■■□□□ 1.4
TCEA3-201ENST00000374601 TARBP1Q13395 1621 aaKnown RBP23.76■■□□□ 1.39
TCEA3-201ENST00000374601 RAD54L2Q9Y4B4 1467 aa23.72■■□□□ 1.39
TCEA3-201ENST00000374601 SOGA1O94964 1423 aa23.67■■□□□ 1.38
TCEA3-201ENST00000374601 IFT140Q96RY7 1462 aa23.67■■□□□ 1.38
TCEA3-201ENST00000374601 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
TCEA3-201ENST00000374601 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
TCEA3-201ENST00000374601 ZNF608Q9ULD9 1512 aaPredicted RBP23.56■■□□□ 1.36
TCEA3-201ENST00000374601 EIF4G3O43432 1585 aaKnown RBP23.56■■□□□ 1.36
TCEA3-201ENST00000374601 PBRM1Q86U86 1689 aa23.52■■□□□ 1.36
TCEA3-201ENST00000374601 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
TCEA3-201ENST00000374601 TDRD9Q8NDG6 1382 aaKnown RBP23.48■■□□□ 1.35
TCEA3-201ENST00000374601 KIF27Q86VH2 1401 aa23.48■■□□□ 1.35
TCEA3-201ENST00000374601 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.342e-7■□□□□ 8.8
TCEA3-201ENST00000374601 GAPVD1Q14C86 1478 aa23.45■■□□□ 1.34
TCEA3-201ENST00000374601 EEA1Q15075 1411 aa23.41■■□□□ 1.34
TCEA3-201ENST00000374601 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
TCEA3-201ENST00000374601 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
TCEA3-201ENST00000374601 CUL7Q14999 1698 aa23.34■■□□□ 1.33
TCEA3-201ENST00000374601 DNAJC5Q9H3Z4 198 aa23.33■■□□□ 1.33
TCEA3-201ENST00000374601 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
TCEA3-201ENST00000374601 IGF1RP08069 1367 aa23.31■■□□□ 1.32
TCEA3-201ENST00000374601 FAM9AQ8IZU1 332 aaPredicted RBP23.31■■□□□ 1.32
TCEA3-201ENST00000374601 SNAPC4Q5SXM2 1469 aa23.29■■□□□ 1.32
TCEA3-201ENST00000374601 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
TCEA3-201ENST00000374601 KIF21BO75037 1637 aa23.25■■□□□ 1.31
TCEA3-201ENST00000374601 CSRNP3Q8WYN3 585 aa23.24■■□□□ 1.31
TCEA3-201ENST00000374601 PRXQ9BXM0 1461 aa23.22■■□□□ 1.31
TCEA3-201ENST00000374601 CHD1O14646 1710 aa23.21■■□□□ 1.31
TCEA3-201ENST00000374601 FHAD1B1AJZ9 1412 aa23.18■■□□□ 1.3
TCEA3-201ENST00000374601 CARMIL1Q5VZK9 1371 aa23.17■■□□□ 1.3
TCEA3-201ENST00000374601 SYNJ2O15056 1496 aa23.16■■□□□ 1.3
TCEA3-201ENST00000374601 RAPGEF2Q9Y4G8 1499 aa23.13■■□□□ 1.29
TCEA3-201ENST00000374601 GRIN2AQ12879 1464 aa23.1■■□□□ 1.29
TCEA3-201ENST00000374601 GOLGA3Q08378 1498 aa23.07■■□□□ 1.28
TCEA3-201ENST00000374601 CTTNBP2Q8WZ74 1663 aa23.05■■□□□ 1.28
TCEA3-201ENST00000374601 CEP170Q5SW79 1584 aa23.01■■□□□ 1.27
TCEA3-201ENST00000374601 CHMP7Q8WUX9 453 aaPredicted RBP22.99■■□□□ 1.27
TCEA3-201ENST00000374601 NUP160Q12769 1436 aa22.97■■□□□ 1.27
TCEA3-201ENST00000374601 FBLN2P98095 1184 aa22.96■■□□□ 1.27
TCEA3-201ENST00000374601 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms