RNA–Protein interactions for RNA: ENST00000450454.6

TCEA3-203, Transcript of transcription elongation factor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA3, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-203ENST00000450454 NISCHQ9Y2I1 1504 aa28.57■■■□□ 2.16
TCEA3-203ENST00000450454 CCDC180Q9P1Z9 1646 aa25.53■■□□□ 1.68
TCEA3-203ENST00000450454 ABCC9O60706 1549 aa25.33■■□□□ 1.65
TCEA3-203ENST00000450454 RB1CC1Q8TDY2 1594 aa24.23■■□□□ 1.47
TCEA3-203ENST00000450454 NACADO15069 1562 aa24.11■■□□□ 1.45
TCEA3-203ENST00000450454 DCAF8L2P0C7V8 631 aa24.05■■□□□ 1.44
TCEA3-203ENST00000450454 MYO15BQ96JP2 1530 aa23.85■■□□□ 1.41
TCEA3-203ENST00000450454 ZCCHC6Q5VYS8 1495 aaKnown RBP23.72■■□□□ 1.39
TCEA3-203ENST00000450454 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.37
TCEA3-203ENST00000450454 DCAF1Q9Y4B6 1507 aa23.62■■□□□ 1.37
TCEA3-203ENST00000450454 UNC13AQ9UPW8 1703 aa23.6■■□□□ 1.37
TCEA3-203ENST00000450454 DNAJC5BQ9UF47 199 aa23.55■■□□□ 1.36
TCEA3-203ENST00000450454 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
TCEA3-203ENST00000450454 SCRIBQ14160 1630 aa23.28■■□□□ 1.32
TCEA3-203ENST00000450454 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
TCEA3-203ENST00000450454 EIF4G1Q04637 1599 aaKnown RBP22.9■■□□□ 1.26
TCEA3-203ENST00000450454 CC2D2AQ9P2K1 1620 aa22.89■■□□□ 1.25
TCEA3-203ENST00000450454 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
TCEA3-203ENST00000450454 NCAPD3P42695 1498 aa22.25■■□□□ 1.15
TCEA3-203ENST00000450454 SMARCA4P51532 1647 aa22.23■■□□□ 1.15
TCEA3-203ENST00000450454 ATAD2BQ9ULI0 1458 aa22.21■■□□□ 1.15
TCEA3-203ENST00000450454 SMARCA2P51531 1590 aa22.18■■□□□ 1.14
TCEA3-203ENST00000450454 BAZ1AQ9NRL2 1556 aaPredicted RBP22.18■■□□□ 1.14
TCEA3-203ENST00000450454 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
TCEA3-203ENST00000450454 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
TCEA3-203ENST00000450454 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
TCEA3-203ENST00000450454 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
TCEA3-203ENST00000450454 ERCC6Q03468 1493 aa21.89■■□□□ 1.09
TCEA3-203ENST00000450454 NESP48681 1621 aa21.81■■□□□ 1.08
TCEA3-203ENST00000450454 CUX2O14529 1486 aa21.77■■□□□ 1.08
TCEA3-203ENST00000450454 WIZO95785 1651 aa21.73■■□□□ 1.07
TCEA3-203ENST00000450454 LAMC3Q9Y6N6 1575 aa21.72■■□□□ 1.07
TCEA3-203ENST00000450454 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.05
TCEA3-203ENST00000450454 PDS5BQ9NTI5 1447 aa21.61■■□□□ 1.05
TCEA3-203ENST00000450454 CADPSQ9ULU8 1353 aa21.6■■□□□ 1.05
TCEA3-203ENST00000450454 THOC2Q8NI27 1593 aaKnown RBP21.54■■□□□ 1.04
TCEA3-203ENST00000450454 KIF21AQ7Z4S6 1674 aa21.52■■□□□ 1.04
TCEA3-203ENST00000450454 DNAJC5Q9H3Z4 198 aa21.51■■□□□ 1.03
TCEA3-203ENST00000450454 TOP2AP11388 1531 aaKnown RBP21.5■■□□□ 1.03
TCEA3-203ENST00000450454 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.01
TCEA3-203ENST00000450454 CFTRP13569 1480 aa21.38■■□□□ 1.01
TCEA3-203ENST00000450454 CEP164Q9UPV0 1460 aa21.36■■□□□ 1.01
TCEA3-203ENST00000450454 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
TCEA3-203ENST00000450454 WDR62O43379 1518 aa21.32■■□□□ 1
TCEA3-203ENST00000450454 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
TCEA3-203ENST00000450454 PRDM2Q13029 1718 aa21.15■□□□□ 0.98
TCEA3-203ENST00000450454 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.97
TCEA3-203ENST00000450454 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
TCEA3-203ENST00000450454 TOPBP1Q92547 1522 aa20.95■□□□□ 0.94
TCEA3-203ENST00000450454 IFT140Q96RY7 1462 aa20.92■□□□□ 0.94
TCEA3-203ENST00000450454 DNMBPQ6XZF7 1577 aa20.9■□□□□ 0.94
TCEA3-203ENST00000450454 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
TCEA3-203ENST00000450454 ZNF608Q9ULD9 1512 aaPredicted RBP20.84■□□□□ 0.93
TCEA3-203ENST00000450454 OSCARQ8IYS5 282 aa20.82■□□□□ 0.92
TCEA3-203ENST00000450454 POLA1P09884 1462 aaPredicted RBP20.75■□□□□ 0.91
TCEA3-203ENST00000450454 TARBP1Q13395 1621 aaKnown RBP20.74■□□□□ 0.91
TCEA3-203ENST00000450454 EIF4G3O43432 1585 aaKnown RBP20.73■□□□□ 0.91
TCEA3-203ENST00000450454 AQRO60306 1485 aaKnown RBP eCLIP20.69■□□□□ 0.92e-7■□□□□ 8.8
TCEA3-203ENST00000450454 SOGA1O94964 1423 aa20.68■□□□□ 0.9
TCEA3-203ENST00000450454 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
TCEA3-203ENST00000450454 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
TCEA3-203ENST00000450454 FGD5Q6ZNL6 1462 aa20.66■□□□□ 0.9
TCEA3-203ENST00000450454 CUX1P39880 1505 aa20.66■□□□□ 0.9
TCEA3-203ENST00000450454 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
TCEA3-203ENST00000450454 WDR97A6NE52 1622 aa20.57■□□□□ 0.88
TCEA3-203ENST00000450454 FBLN2P98095 1184 aa20.54■□□□□ 0.88
TCEA3-203ENST00000450454 CHD1O14646 1710 aa20.52■□□□□ 0.88
TCEA3-203ENST00000450454 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
TCEA3-203ENST00000450454 RIMBP3CA6NJZ7 1639 aa20.48■□□□□ 0.87
TCEA3-203ENST00000450454 RIMBP3BA6NNM3 1639 aa20.48■□□□□ 0.87
TCEA3-203ENST00000450454 RIMBP3Q9UFD9 1639 aa20.48■□□□□ 0.87
TCEA3-203ENST00000450454 GRIN2BQ13224 1484 aa20.48■□□□□ 0.87
TCEA3-203ENST00000450454 ARHGEF11O15085 1522 aa20.46■□□□□ 0.87
TCEA3-203ENST00000450454 MAGI1Q96QZ7 1491 aaPredicted RBP20.45■□□□□ 0.86
TCEA3-203ENST00000450454 ABCA10Q8WWZ4 1543 aa20.44■□□□□ 0.86
TCEA3-203ENST00000450454 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
TCEA3-203ENST00000450454 CHMP7Q8WUX9 453 aaPredicted RBP20.43■□□□□ 0.86
TCEA3-203ENST00000450454 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
TCEA3-203ENST00000450454 TOP2BQ02880 1626 aa20.4■□□□□ 0.86
TCEA3-203ENST00000450454 BIVM-ERCC5R4GMW8 1640 aa20.39■□□□□ 0.85
TCEA3-203ENST00000450454 SYNJ2O15056 1496 aa20.38■□□□□ 0.85
TCEA3-203ENST00000450454 PBRM1Q86U86 1689 aa20.37■□□□□ 0.85
TCEA3-203ENST00000450454 ABCA5Q8WWZ7 1642 aa20.37■□□□□ 0.85
TCEA3-203ENST00000450454 SYNJ1O43426 1573 aa20.36■□□□□ 0.85
TCEA3-203ENST00000450454 CLASP1Q7Z460 1538 aa20.31■□□□□ 0.84
TCEA3-203ENST00000450454 CYB5RLQ6IPT4 315 aa20.31■□□□□ 0.84
TCEA3-203ENST00000450454 ARAP1Q96P48 1450 aa20.27■□□□□ 0.83
TCEA3-203ENST00000450454 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
TCEA3-203ENST00000450454 GRIN2AQ12879 1464 aa20.21■□□□□ 0.83
TCEA3-203ENST00000450454 ERICH3Q5RHP9 1530 aa20.2■□□□□ 0.82
TCEA3-203ENST00000450454 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
TCEA3-203ENST00000450454 NUP160Q12769 1436 aa20.13■□□□□ 0.81
TCEA3-203ENST00000450454 CEP170Q5SW79 1584 aa20.11■□□□□ 0.81
TCEA3-203ENST00000450454 KIF27Q86VH2 1401 aa20.03■□□□□ 0.8
TCEA3-203ENST00000450454 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
TCEA3-203ENST00000450454 SHROOM2Q13796 1616 aa20■□□□□ 0.79
TCEA3-203ENST00000450454 ERCC6L2Q5T890 1561 aa19.99■□□□□ 0.79
TCEA3-203ENST00000450454 IGF1RP08069 1367 aa19.98■□□□□ 0.79
TCEA3-203ENST00000450454 JPH4Q96JJ6 628 aa19.94■□□□□ 0.78
TCEA3-203ENST00000450454 CUL7Q14999 1698 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms