RNA–Protein interactions for RNA: ENST00000523147.5

PTP4A3-205, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5

Gene PTP4A3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-205ENST00000523147 NISCHQ9Y2I1 1504 aa51.52■■■■■ 5.84
PTP4A3-205ENST00000523147 CCDC180Q9P1Z9 1646 aa46.01■■■■■ 4.96
PTP4A3-205ENST00000523147 ABCC9O60706 1549 aa45.59■■■■■ 4.89
PTP4A3-205ENST00000523147 RB1CC1Q8TDY2 1594 aa43.61■■■■■ 4.57
PTP4A3-205ENST00000523147 DCAF8L2P0C7V8 631 aa43.48■■■■■ 4.55
PTP4A3-205ENST00000523147 NACADO15069 1562 aa43.41■■■■■ 4.54
PTP4A3-205ENST00000523147 MYO15BQ96JP2 1530 aa42.92■■■■■ 4.46
PTP4A3-205ENST00000523147 ZCCHC6Q5VYS8 1495 aaKnown RBP42.78■■■■■ 4.44
PTP4A3-205ENST00000523147 PABPN1Q86U42 306 aaKnown RBP eCLIP42.56■■■■■ 4.4
PTP4A3-205ENST00000523147 DCAF1Q9Y4B6 1507 aa42.56■■■■■ 4.4
PTP4A3-205ENST00000523147 UNC13AQ9UPW8 1703 aa42.55■■■■■ 4.4
PTP4A3-205ENST00000523147 DNAJC5BQ9UF47 199 aa42.26■■■■■ 4.36
PTP4A3-205ENST00000523147 BICRAQ9NZM4 1560 aa42.22■■■■■ 4.35
PTP4A3-205ENST00000523147 SCRIBQ14160 1630 aa42■■■■■ 4.31
PTP4A3-205ENST00000523147 SHROOM4Q9ULL8 1493 aa41.75■■■■■ 4.27
PTP4A3-205ENST00000523147 EIF4G1Q04637 1599 aaKnown RBP41.2■■■■■ 4.19
PTP4A3-205ENST00000523147 CC2D2AQ9P2K1 1620 aa41.18■■■■■ 4.18
PTP4A3-205ENST00000523147 CECR2Q9BXF3 1484 aa41.02■■■■■ 4.16
PTP4A3-205ENST00000523147 SMARCA4P51532 1647 aa40.09■■■■■ 4.01
PTP4A3-205ENST00000523147 NCAPD3P42695 1498 aa40.05■■■■■ 4
PTP4A3-205ENST00000523147 ATAD2BQ9ULI0 1458 aa40■■■■□ 3.99
PTP4A3-205ENST00000523147 BAZ1AQ9NRL2 1556 aaPredicted RBP39.99■■■■□ 3.99
PTP4A3-205ENST00000523147 SMARCA2P51531 1590 aa39.95■■■■□ 3.99
PTP4A3-205ENST00000523147 HMGXB3Q12766 1538 aa39.79■■■■□ 3.96
PTP4A3-205ENST00000523147 MROH2BQ7Z745 1585 aa39.7■■■■□ 3.95
PTP4A3-205ENST00000523147 BAZ1BQ9UIG0 1483 aaKnown RBP39.69■■■■□ 3.94
PTP4A3-205ENST00000523147 PEG3Q9GZU2 1588 aa39.65■■■■□ 3.94
PTP4A3-205ENST00000523147 ERCC6Q03468 1493 aa39.39■■■■□ 3.9
PTP4A3-205ENST00000523147 WIZO95785 1651 aa39.26■■■■□ 3.88
PTP4A3-205ENST00000523147 NESP48681 1621 aa39.26■■■■□ 3.88
PTP4A3-205ENST00000523147 LAMC3Q9Y6N6 1575 aa39.09■■■■□ 3.85
PTP4A3-205ENST00000523147 CUX2O14529 1486 aa39.07■■■■□ 3.85
PTP4A3-205ENST00000523147 RSF1Q96T23 1441 aaPredicted RBP39.06■■■■□ 3.84
PTP4A3-205ENST00000523147 PDS5BQ9NTI5 1447 aa38.89■■■■□ 3.82
PTP4A3-205ENST00000523147 CADPSQ9ULU8 1353 aa38.89■■■■□ 3.82
PTP4A3-205ENST00000523147 TOP2AP11388 1531 aaKnown RBP38.79■■■■□ 3.8
PTP4A3-205ENST00000523147 KIF21AQ7Z4S6 1674 aa38.78■■■■□ 3.8
PTP4A3-205ENST00000523147 THOC2Q8NI27 1593 aaKnown RBP38.74■■■■□ 3.79
PTP4A3-205ENST00000523147 CFTRP13569 1480 aa38.52■■■■□ 3.76
PTP4A3-205ENST00000523147 DNAJC5Q9H3Z4 198 aa38.5■■■■□ 3.75
PTP4A3-205ENST00000523147 MRC2Q9UBG0 1479 aa38.49■■■■□ 3.75
PTP4A3-205ENST00000523147 CEP164Q9UPV0 1460 aa38.47■■■■□ 3.75
PTP4A3-205ENST00000523147 FANCD2Q9BXW9 1451 aa38.45■■■■□ 3.75
PTP4A3-205ENST00000523147 CCDC88BA6NC98 1476 aa38.36■■■■□ 3.73
PTP4A3-205ENST00000523147 WDR62O43379 1518 aa38.35■■■■□ 3.73
PTP4A3-205ENST00000523147 PRDM2Q13029 1718 aa38.18■■■■□ 3.7
PTP4A3-205ENST00000523147 URB2Q14146 1524 aaKnown RBP38.06■■■■□ 3.68
PTP4A3-205ENST00000523147 SUPT5HO00267 1087 aaKnown RBP37.85■■■■□ 3.65
PTP4A3-205ENST00000523147 ABCC8Q09428 1581 aa37.76■■■■□ 3.64
PTP4A3-205ENST00000523147 TOPBP1Q92547 1522 aa37.76■■■■□ 3.63
PTP4A3-205ENST00000523147 DNMBPQ6XZF7 1577 aa37.67■■■■□ 3.62
PTP4A3-205ENST00000523147 IFT140Q96RY7 1462 aa37.66■■■■□ 3.62
PTP4A3-205ENST00000523147 ZNF608Q9ULD9 1512 aaPredicted RBP37.52■■■■□ 3.6
PTP4A3-205ENST00000523147 OSCARQ8IYS5 282 aa37.45■■■■□ 3.59
PTP4A3-205ENST00000523147 POLA1P09884 1462 aaPredicted RBP37.4■■■■□ 3.58
PTP4A3-205ENST00000523147 TARBP1Q13395 1621 aaKnown RBP37.36■■■■□ 3.57
PTP4A3-205ENST00000523147 EIF4G3O43432 1585 aaKnown RBP37.35■■■■□ 3.57
PTP4A3-205ENST00000523147 SOGA1O94964 1423 aa37.29■■■■□ 3.56
PTP4A3-205ENST00000523147 AQRO60306 1485 aaKnown RBP eCLIP37.27■■■■□ 3.561e-10■■■□□ 16.1
PTP4A3-205ENST00000523147 RAD54L2Q9Y4B4 1467 aa37.26■■■■□ 3.56
PTP4A3-205ENST00000523147 CUX1P39880 1505 aa37.26■■■■□ 3.56
PTP4A3-205ENST00000523147 FGD5Q6ZNL6 1462 aa37.26■■■■□ 3.55
PTP4A3-205ENST00000523147 TDRD9Q8NDG6 1382 aaKnown RBP37.15■■■■□ 3.54
PTP4A3-205ENST00000523147 TRIM41Q8WV44 630 aa37.12■■■■□ 3.53
PTP4A3-205ENST00000523147 FBLN2P98095 1184 aa37.06■■■■□ 3.52
PTP4A3-205ENST00000523147 WDR97A6NE52 1622 aa37.03■■■■□ 3.52
PTP4A3-205ENST00000523147 CHD1O14646 1710 aa36.98■■■■□ 3.51
PTP4A3-205ENST00000523147 SNAPC4Q5SXM2 1469 aa36.91■■■■□ 3.5
PTP4A3-205ENST00000523147 GRIN2BQ13224 1484 aa36.89■■■■□ 3.5
PTP4A3-205ENST00000523147 WRNQ14191 1432 aaPredicted RBP eCLIP36.89■■■■□ 3.58e-7■■■■■ 36.5
PTP4A3-205ENST00000523147 CHMP7Q8WUX9 453 aaPredicted RBP36.84■■■■□ 3.49
PTP4A3-205ENST00000523147 ABCA10Q8WWZ4 1543 aa36.84■■■■□ 3.49
PTP4A3-205ENST00000523147 GAPVD1Q14C86 1478 aa36.83■■■■□ 3.49
PTP4A3-205ENST00000523147 MAGI1Q96QZ7 1491 aaPredicted RBP36.83■■■■□ 3.49
PTP4A3-205ENST00000523147 RIMBP3CA6NJZ7 1639 aa36.82■■■■□ 3.49
PTP4A3-205ENST00000523147 RIMBP3BA6NNM3 1639 aa36.82■■■■□ 3.49
PTP4A3-205ENST00000523147 TOP2BQ02880 1626 aa36.82■■■■□ 3.49
PTP4A3-205ENST00000523147 RIMBP3Q9UFD9 1639 aa36.82■■■■□ 3.49
PTP4A3-205ENST00000523147 BIVM-ERCC5R4GMW8 1640 aa36.81■■■■□ 3.48
PTP4A3-205ENST00000523147 SYNJ1O43426 1573 aa36.78■■■■□ 3.48
PTP4A3-205ENST00000523147 PBRM1Q86U86 1689 aa36.77■■■■□ 3.48
PTP4A3-205ENST00000523147 ARHGEF11O15085 1522 aa36.76■■■■□ 3.48
PTP4A3-205ENST00000523147 ABCA5Q8WWZ7 1642 aa36.72■■■■□ 3.47
PTP4A3-205ENST00000523147 SYNJ2O15056 1496 aa36.71■■■■□ 3.47
PTP4A3-205ENST00000523147 CYB5RLQ6IPT4 315 aa36.56■■■■□ 3.44
PTP4A3-205ENST00000523147 CLASP1Q7Z460 1538 aa36.53■■■■□ 3.44
PTP4A3-205ENST00000523147 ADAMTS12P58397 1594 aa36.41■■■■□ 3.42
PTP4A3-205ENST00000523147 ARAP1Q96P48 1450 aa36.41■■■■□ 3.42
PTP4A3-205ENST00000523147 ERICH3Q5RHP9 1530 aa36.4■■■■□ 3.42
PTP4A3-205ENST00000523147 GRIN2AQ12879 1464 aa36.4■■■■□ 3.42
PTP4A3-205ENST00000523147 FHAD1B1AJZ9 1412 aa36.38■■■■□ 3.41
PTP4A3-205ENST00000523147 NUP160Q12769 1436 aa36.23■■■■□ 3.39
PTP4A3-205ENST00000523147 CEP170Q5SW79 1584 aa36.22■■■■□ 3.39
PTP4A3-205ENST00000523147 KIF27Q86VH2 1401 aa36.18■■■■□ 3.38
PTP4A3-205ENST00000523147 IGF1RP08069 1367 aa36.05■■■■□ 3.36
PTP4A3-205ENST00000523147 TRHP20396 242 aaPredicted RBP36.05■■■■□ 3.36
PTP4A3-205ENST00000523147 ERCC6L2Q5T890 1561 aa36■■■■□ 3.35
PTP4A3-205ENST00000523147 SHROOM2Q13796 1616 aa35.99■■■■□ 3.35
PTP4A3-205ENST00000523147 CUL7Q14999 1698 aa35.99■■■■□ 3.35
PTP4A3-205ENST00000523147 JPH4Q96JJ6 628 aa35.95■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms