RNA–Protein interactions for RNA: ENST00000511725.5

UBE2D2-208, Transcript of ubiquitin conjugating enzyme E2 D2, humanhuman

TSL 2 BASIC

Gene UBE2D2, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D2-208ENST00000511725 CHIC1Q5VXU3 224 aa27.22■■□□□ 1.95
UBE2D2-208ENST00000511725 AEBP2Q6ZN18 517 aaPredicted RBP27.2■■□□□ 1.94
UBE2D2-208ENST00000511725 NISCHQ9Y2I1 1504 aa25.06■■□□□ 1.6
UBE2D2-208ENST00000511725 PHF23Q9BUL5 403 aaPredicted RBP23.94■■□□□ 1.42
UBE2D2-208ENST00000511725 SENP3Q9H4L4 574 aaPredicted RBP23.11■■□□□ 1.29
UBE2D2-208ENST00000511725 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
UBE2D2-208ENST00000511725 CCDC180Q9P1Z9 1646 aa22.14■■□□□ 1.14
UBE2D2-208ENST00000511725 ABCC9O60706 1549 aa21.62■■□□□ 1.05
UBE2D2-208ENST00000511725 FOXD1Q16676 465 aa21.29■■□□□ 1
UBE2D2-208ENST00000511725 ADRA2BP18089 450 aa20.96■□□□□ 0.95
UBE2D2-208ENST00000511725 DCAF8L2P0C7V8 631 aa20.93■□□□□ 0.94
UBE2D2-208ENST00000511725 PPP6R1Q9UPN7 881 aa20.92■□□□□ 0.94
UBE2D2-208ENST00000511725 ZCCHC6Q5VYS8 1495 aaKnown RBP20.87■□□□□ 0.93
UBE2D2-208ENST00000511725 NACADO15069 1562 aa20.8■□□□□ 0.92
UBE2D2-208ENST00000511725 RB1CC1Q8TDY2 1594 aa20.79■□□□□ 0.92
UBE2D2-208ENST00000511725 MYO15BQ96JP2 1530 aa20.72■□□□□ 0.91
UBE2D2-208ENST00000511725 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
UBE2D2-208ENST00000511725 UNC13AQ9UPW8 1703 aa20.4■□□□□ 0.86
UBE2D2-208ENST00000511725 PABPN1Q86U42 306 aaKnown RBP eCLIP20.29■□□□□ 0.843e-6■■■■□ 21.7
UBE2D2-208ENST00000511725 PIAS4Q8N2W9 510 aaPredicted RBP20.27■□□□□ 0.84
UBE2D2-208ENST00000511725 SCRIBQ14160 1630 aa20.27■□□□□ 0.83
UBE2D2-208ENST00000511725 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
UBE2D2-208ENST00000511725 KCNA4P22459 653 aa19.97■□□□□ 0.79
UBE2D2-208ENST00000511725 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
UBE2D2-208ENST00000511725 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
UBE2D2-208ENST00000511725 PPP4R3CPQ6ZMV5 832 aa19.79■□□□□ 0.76
UBE2D2-208ENST00000511725 EIF4G1Q04637 1599 aaKnown RBP19.65■□□□□ 0.74
UBE2D2-208ENST00000511725 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
UBE2D2-208ENST00000511725 CC2D2AQ9P2K1 1620 aa19.55■□□□□ 0.72
UBE2D2-208ENST00000511725 NCBP3Q53F19 620 aaKnown RBP19.54■□□□□ 0.72
UBE2D2-208ENST00000511725 MSH5O43196 834 aa19.5■□□□□ 0.71
UBE2D2-208ENST00000511725 SMARCA4P51532 1647 aa19.39■□□□□ 0.69
UBE2D2-208ENST00000511725 BAZ1AQ9NRL2 1556 aaPredicted RBP19.36■□□□□ 0.69
UBE2D2-208ENST00000511725 MROH2BQ7Z745 1585 aa19.34■□□□□ 0.69
UBE2D2-208ENST00000511725 SCAF1Q9H7N4 1312 aaKnown RBP19.32■□□□□ 0.68
UBE2D2-208ENST00000511725 EHMT2Q96KQ7 1210 aa19.28■□□□□ 0.68
UBE2D2-208ENST00000511725 ATAD2BQ9ULI0 1458 aa19.28■□□□□ 0.68
UBE2D2-208ENST00000511725 NCAPD3P42695 1498 aa19.24■□□□□ 0.67
UBE2D2-208ENST00000511725 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
UBE2D2-208ENST00000511725 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
UBE2D2-208ENST00000511725 SLC4A1APQ9BWU0 796 aaKnown RBP19.18■□□□□ 0.66
UBE2D2-208ENST00000511725 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
UBE2D2-208ENST00000511725 NPM3O75607 178 aaKnown RBP19.15■□□□□ 0.66
UBE2D2-208ENST00000511725 CNKSR2Q8WXI2 1034 aa19.14■□□□□ 0.65
UBE2D2-208ENST00000511725 WIZO95785 1651 aa19.14■□□□□ 0.65
UBE2D2-208ENST00000511725 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
UBE2D2-208ENST00000511725 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
UBE2D2-208ENST00000511725 TOP2AP11388 1531 aaKnown RBP18.87■□□□□ 0.61
UBE2D2-208ENST00000511725 MAPK8IP2Q13387 824 aaPredicted RBP18.82■□□□□ 0.6
UBE2D2-208ENST00000511725 SUPT5HO00267 1087 aaKnown RBP18.81■□□□□ 0.6
UBE2D2-208ENST00000511725 NESP48681 1621 aa18.78■□□□□ 0.6
UBE2D2-208ENST00000511725 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
UBE2D2-208ENST00000511725 CCDC88BA6NC98 1476 aa18.72■□□□□ 0.59
UBE2D2-208ENST00000511725 CADPSQ9ULU8 1353 aa18.69■□□□□ 0.58
UBE2D2-208ENST00000511725 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
UBE2D2-208ENST00000511725 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
UBE2D2-208ENST00000511725 CFTRP13569 1480 aa18.6■□□□□ 0.57
UBE2D2-208ENST00000511725 ERCC6Q03468 1493 aa18.56■□□□□ 0.56
UBE2D2-208ENST00000511725 PDS5BQ9NTI5 1447 aa18.55■□□□□ 0.56
UBE2D2-208ENST00000511725 KIF21AQ7Z4S6 1674 aa18.52■□□□□ 0.56
UBE2D2-208ENST00000511725 DMRT2Q9Y5R5 561 aa18.51■□□□□ 0.55
UBE2D2-208ENST00000511725 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.54
UBE2D2-208ENST00000511725 PRDM2Q13029 1718 aa18.42■□□□□ 0.54
UBE2D2-208ENST00000511725 THOC2Q8NI27 1593 aaKnown RBP18.4■□□□□ 0.54
UBE2D2-208ENST00000511725 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
UBE2D2-208ENST00000511725 HOXD11P31277 338 aaPredicted RBP18.36■□□□□ 0.53
UBE2D2-208ENST00000511725 MRC2Q9UBG0 1479 aa18.34■□□□□ 0.53
UBE2D2-208ENST00000511725 ZBTB22O15209 634 aa18.34■□□□□ 0.53
UBE2D2-208ENST00000511725 CUX2O14529 1486 aa18.31■□□□□ 0.52
UBE2D2-208ENST00000511725 URB2Q14146 1524 aaKnown RBP18.3■□□□□ 0.52
UBE2D2-208ENST00000511725 WDR62O43379 1518 aa18.28■□□□□ 0.52
UBE2D2-208ENST00000511725 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
UBE2D2-208ENST00000511725 TOPBP1Q92547 1522 aa18.18■□□□□ 0.5
UBE2D2-208ENST00000511725 DNMBPQ6XZF7 1577 aa18.15■□□□□ 0.5
UBE2D2-208ENST00000511725 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
UBE2D2-208ENST00000511725 CUX1P39880 1505 aa18.13■□□□□ 0.49
UBE2D2-208ENST00000511725 POLA1P09884 1462 aaPredicted RBP18.04■□□□□ 0.48
UBE2D2-208ENST00000511725 WRNQ14191 1432 aaPredicted RBP eCLIP18.02■□□□□ 0.48
UBE2D2-208ENST00000511725 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
UBE2D2-208ENST00000511725 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
UBE2D2-208ENST00000511725 IFT140Q96RY7 1462 aa18■□□□□ 0.47
UBE2D2-208ENST00000511725 SYNJ1O43426 1573 aa18■□□□□ 0.47
UBE2D2-208ENST00000511725 ZNF608Q9ULD9 1512 aaPredicted RBP17.99■□□□□ 0.47
UBE2D2-208ENST00000511725 TARBP1Q13395 1621 aaKnown RBP17.99■□□□□ 0.47
UBE2D2-208ENST00000511725 SOGA1O94964 1423 aa17.98■□□□□ 0.47
UBE2D2-208ENST00000511725 TOP2BQ02880 1626 aa17.97■□□□□ 0.47
UBE2D2-208ENST00000511725 BIVM-ERCC5R4GMW8 1640 aa17.95■□□□□ 0.46
UBE2D2-208ENST00000511725 AQRO60306 1485 aaKnown RBP eCLIP17.91■□□□□ 0.461e-7■■■□□ 17.7
UBE2D2-208ENST00000511725 SLC4A2P04920 1241 aa17.9■□□□□ 0.46
UBE2D2-208ENST00000511725 TDRD9Q8NDG6 1382 aaKnown RBP17.9■□□□□ 0.46
UBE2D2-208ENST00000511725 EIF4G3O43432 1585 aaKnown RBP17.85■□□□□ 0.45
UBE2D2-208ENST00000511725 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
UBE2D2-208ENST00000511725 ABCA10Q8WWZ4 1543 aa17.84■□□□□ 0.45
UBE2D2-208ENST00000511725 GAPVD1Q14C86 1478 aa17.76■□□□□ 0.43
UBE2D2-208ENST00000511725 ABCA5Q8WWZ7 1642 aa17.74■□□□□ 0.43
UBE2D2-208ENST00000511725 MYCNP04198 464 aaPredicted RBP17.74■□□□□ 0.43
UBE2D2-208ENST00000511725 GRIN2BQ13224 1484 aa17.72■□□□□ 0.43
UBE2D2-208ENST00000511725 TRIM41Q8WV44 630 aa17.72■□□□□ 0.43
UBE2D2-208ENST00000511725 DNAJC5Q9H3Z4 198 aa17.71■□□□□ 0.43
UBE2D2-208ENST00000511725 PBRM1Q86U86 1689 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms