RNA–Protein interactions for RNA: ENST00000359568.9

PCNT-201, Transcript of pericentrin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCNT, Length 10,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNT-201ENST00000359568 MYT1Q01538 1121 aa17.51■□□□□ 0.39
PCNT-201ENST00000359568 PELP1Q8IZL8 1130 aaKnown RBP17.43■□□□□ 0.38
PCNT-201ENST00000359568 DCAF8L2P0C7V8 631 aa16.65■□□□□ 0.26
PCNT-201ENST00000359568 SUPT5HO00267 1087 aaKnown RBP16.61■□□□□ 0.25
PCNT-201ENST00000359568 CENPBP07199 599 aaPredicted RBP16.56■□□□□ 0.24
PCNT-201ENST00000359568 ERICH6Q7L0X2 663 aa16.47■□□□□ 0.23
PCNT-201ENST00000359568 PCGF6Q9BYE7 350 aa16.42■□□□□ 0.22
PCNT-201ENST00000359568 CCER1Q8TC90 406 aaPredicted RBP16.34■□□□□ 0.21
PCNT-201ENST00000359568 TTBK1Q5TCY1 1321 aaPredicted RBP16.31■□□□□ 0.2
PCNT-201ENST00000359568 ZEB1P37275 1124 aaPredicted RBP16.28■□□□□ 0.2
PCNT-201ENST00000359568 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
PCNT-201ENST00000359568 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
PCNT-201ENST00000359568 NISCHQ9Y2I1 1504 aa16.13■□□□□ 0.17
PCNT-201ENST00000359568 NEFLP07196 543 aa16.03■□□□□ 0.16
PCNT-201ENST00000359568 YTHDC1Q96MU7 727 aaKnown RBP15.99■□□□□ 0.15
PCNT-201ENST00000359568 APLP2Q06481 763 aa15.96■□□□□ 0.15
PCNT-201ENST00000359568 HRCP23327 699 aa15.89■□□□□ 0.13
PCNT-201ENST00000359568 FAM9AQ8IZU1 332 aaPredicted RBP15.66■□□□□ 0.1
PCNT-201ENST00000359568 DAXXQ9UER7 740 aaPredicted RBP15.57■□□□□ 0.08
PCNT-201ENST00000359568 RTL5Q5HYW3 569 aaPredicted RBP15.54■□□□□ 0.08
PCNT-201ENST00000359568 TRIM26Q12899 539 aaPredicted RBP15.53■□□□□ 0.08
PCNT-201ENST00000359568 PPARGC1BQ86YN6 1023 aaKnown RBP15.45■□□□□ 0.06
PCNT-201ENST00000359568 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
PCNT-201ENST00000359568 GTF3C3Q9Y5Q9 886 aa15.3■□□□□ 0.04
PCNT-201ENST00000359568 DIEXFQ68CQ4 756 aaKnown RBP15.28■□□□□ 0.04
PCNT-201ENST00000359568 ZNF316A6NFI3 1004 aaPredicted RBP15.27■□□□□ 0.03
PCNT-201ENST00000359568 RANGAP1P46060 587 aaPredicted RBP15.22■□□□□ 0.03
PCNT-201ENST00000359568 GLIPR1L2Q4G1C9 344 aa15.19■□□□□ 0.02
PCNT-201ENST00000359568 UBTFP17480 764 aaKnown RBP15.18■□□□□ 0.02
PCNT-201ENST00000359568 ACIN1Q9UKV3 1341 aaKnown RBP15.1■□□□□ 0.01
PCNT-201ENST00000359568 BCANQ96GW7 911 aa15.07■□□□□ 0
PCNT-201ENST00000359568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
PCNT-201ENST00000359568 EIF5BO60841 1220 aaKnown RBP14.99□□□□□ -0.01
PCNT-201ENST00000359568 CDK11AQ9UQ88 783 aaPredicted RBP14.98□□□□□ -0.01
PCNT-201ENST00000359568 ATP1B4Q9UN42 357 aaPredicted RBP14.95□□□□□ -0.02
PCNT-201ENST00000359568 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
PCNT-201ENST00000359568 CLSPNQ9HAW4 1339 aa14.94□□□□□ -0.02
PCNT-201ENST00000359568 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
PCNT-201ENST00000359568 CHIC1Q5VXU3 224 aa14.88□□□□□ -0.03
PCNT-201ENST00000359568 HNRNPUL2Q1KMD3 747 aaKnown RBP14.87□□□□□ -0.03
PCNT-201ENST00000359568 POLR3GLQ9BT43 218 aa14.87□□□□□ -0.03
PCNT-201ENST00000359568 ANP32AP39687 249 aaKnown RBP14.86□□□□□ -0.03
PCNT-201ENST00000359568 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
PCNT-201ENST00000359568 ITGAEP38570 1179 aa14.78□□□□□ -0.04
PCNT-201ENST00000359568 CNGB1Q14028 1251 aaPredicted RBP14.72□□□□□ -0.05
PCNT-201ENST00000359568 ANP32CO43423 234 aa14.68□□□□□ -0.06
PCNT-201ENST00000359568 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
PCNT-201ENST00000359568 NEUROD1Q13562 356 aa14.62□□□□□ -0.07
PCNT-201ENST00000359568 NBR1Q14596 966 aa14.62□□□□□ -0.07
PCNT-201ENST00000359568 NPM2Q86SE8 214 aaKnown RBP14.6□□□□□ -0.07
PCNT-201ENST00000359568 DCAF1Q9Y4B6 1507 aa14.59□□□□□ -0.07
PCNT-201ENST00000359568 ANP32BQ92688 251 aaKnown RBP14.58□□□□□ -0.08
PCNT-201ENST00000359568 ANP32EQ9BTT0 268 aa14.57□□□□□ -0.08
PCNT-201ENST00000359568 CCDC180Q9P1Z9 1646 aa14.56□□□□□ -0.08
PCNT-201ENST00000359568 FKBP8Q14318 412 aa14.53□□□□□ -0.08
PCNT-201ENST00000359568 CANXP27824 592 aaKnown RBP14.45□□□□□ -0.1
PCNT-201ENST00000359568 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
PCNT-201ENST00000359568 TNNT2P45379 298 aaPredicted RBP14.38□□□□□ -0.11
PCNT-201ENST00000359568 FAM50AQ14320 339 aaKnown RBP14.36□□□□□ -0.11
PCNT-201ENST00000359568 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
PCNT-201ENST00000359568 HSP90AA1P07900 732 aaKnown RBP14.35□□□□□ -0.11
PCNT-201ENST00000359568 ARXQ96QS3 562 aa14.34□□□□□ -0.11
PCNT-201ENST00000359568 UPF2Q9HAU5 1272 aaKnown RBP14.31□□□□□ -0.12
PCNT-201ENST00000359568 NEFMP07197 916 aa14.29□□□□□ -0.12
PCNT-201ENST00000359568 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.12
PCNT-201ENST00000359568 ZNF326Q5BKZ1 582 aaKnown RBP14.26□□□□□ -0.13
PCNT-201ENST00000359568 HNRNPUQ00839 825 aaKnown RBP eCLIP14.26□□□□□ -0.13
PCNT-201ENST00000359568 RTN4Q9NQC3 1192 aaKnown RBP14.24□□□□□ -0.13
PCNT-201ENST00000359568 ERICH6BQ5W0A0 696 aa14.24□□□□□ -0.13
PCNT-201ENST00000359568 TRIM52Q96A61 297 aa14.22□□□□□ -0.13
PCNT-201ENST00000359568 CDK11BP21127 795 aaKnown RBP14.2□□□□□ -0.14
PCNT-201ENST00000359568 NAP1L5Q96NT1 182 aaPredicted RBP14.2□□□□□ -0.14
PCNT-201ENST00000359568 MIER1Q8N108 512 aa14.2□□□□□ -0.14
PCNT-201ENST00000359568 DDRGK1Q96HY6 314 aa14.17□□□□□ -0.14
PCNT-201ENST00000359568 NCLP19338 710 aaKnown RBP14.17□□□□□ -0.14
PCNT-201ENST00000359568 IRX6P78412 446 aaPredicted RBP14.13□□□□□ -0.15
PCNT-201ENST00000359568 DEKP35659 375 aaKnown RBP14.13□□□□□ -0.15
PCNT-201ENST00000359568 TRIM44Q96DX7 344 aaPredicted RBP14.13□□□□□ -0.15
PCNT-201ENST00000359568 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
PCNT-201ENST00000359568 NOP58Q9Y2X3 529 aaKnown RBP14.12□□□□□ -0.15
PCNT-201ENST00000359568 TONSLQ96HA7 1378 aa14.1□□□□□ -0.15
PCNT-201ENST00000359568 BECN1Q14457 450 aa14.1□□□□□ -0.15
PCNT-201ENST00000359568 DDX10Q13206 875 aaKnown RBP14.08□□□□□ -0.16
PCNT-201ENST00000359568 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
PCNT-201ENST00000359568 LAS1LQ9Y4W2 734 aaKnown RBP14.06□□□□□ -0.16
PCNT-201ENST00000359568 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.05□□□□□ -0.16
PCNT-201ENST00000359568 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
PCNT-201ENST00000359568 SUPT16HQ9Y5B9 1047 aaKnown RBP14.04□□□□□ -0.16
PCNT-201ENST00000359568 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.16
PCNT-201ENST00000359568 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.01□□□□□ -0.17
PCNT-201ENST00000359568 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
PCNT-201ENST00000359568 PTMAP06454 111 aaKnown RBP13.98□□□□□ -0.17
PCNT-201ENST00000359568 MRS2Q9HD23 443 aa13.98□□□□□ -0.17
PCNT-201ENST00000359568 GOLGA6L22H0YM25 854 aa13.97□□□□□ -0.17
PCNT-201ENST00000359568 PRKCSHP14314 528 aaPredicted RBP13.93□□□□□ -0.18
PCNT-201ENST00000359568 DNTTIP2Q5QJE6 756 aaKnown RBP13.91□□□□□ -0.18
PCNT-201ENST00000359568 L1TD1Q5T7N2 865 aaKnown RBP13.87□□□□□ -0.19
PCNT-201ENST00000359568 PPP4R2Q9NY27 417 aa13.87□□□□□ -0.19
PCNT-201ENST00000359568 TMC1Q8TDI8 760 aa13.87□□□□□ -0.19
PCNT-201ENST00000359568 RBM19Q9Y4C8 960 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms