RNA–Protein interactions for RNA: ENST00000520490.1

RPS20-206, Transcript of ribosomal protein S20, humanhuman

TSL 3

Gene RPS20, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS20-206ENST00000520490 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
RPS20-206ENST00000520490 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
RPS20-206ENST00000520490 CHIC1Q5VXU3 224 aa17.8■□□□□ 0.44
RPS20-206ENST00000520490 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.3
RPS20-206ENST00000520490 ABCC9O60706 1549 aa16.5■□□□□ 0.23
RPS20-206ENST00000520490 DCAF8L2P0C7V8 631 aa16.09■□□□□ 0.17
RPS20-206ENST00000520490 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
RPS20-206ENST00000520490 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
RPS20-206ENST00000520490 NACADO15069 1562 aa15.96■□□□□ 0.15
RPS20-206ENST00000520490 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.14
RPS20-206ENST00000520490 MYO15BQ96JP2 1530 aa15.9■□□□□ 0.14
RPS20-206ENST00000520490 DCAF1Q9Y4B6 1507 aa15.87■□□□□ 0.13
RPS20-206ENST00000520490 PHF23Q9BUL5 403 aaPredicted RBP15.84■□□□□ 0.13
RPS20-206ENST00000520490 SCRIBQ14160 1630 aa15.47■□□□□ 0.07
RPS20-206ENST00000520490 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
RPS20-206ENST00000520490 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
RPS20-206ENST00000520490 SHROOM4Q9ULL8 1493 aa15.34■□□□□ 0.05
RPS20-206ENST00000520490 BICRAQ9NZM4 1560 aa15.34■□□□□ 0.05
RPS20-206ENST00000520490 EIF4G1Q04637 1599 aaKnown RBP15□□□□□ -0.01
RPS20-206ENST00000520490 FOXD1Q16676 465 aa14.96□□□□□ -0.01
RPS20-206ENST00000520490 DNAJC5BQ9UF47 199 aa14.96□□□□□ -0.01
RPS20-206ENST00000520490 CC2D2AQ9P2K1 1620 aa14.89□□□□□ -0.03
RPS20-206ENST00000520490 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
RPS20-206ENST00000520490 CECR2Q9BXF3 1484 aa14.86□□□□□ -0.03
RPS20-206ENST00000520490 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
RPS20-206ENST00000520490 SMARCA2P51531 1590 aa14.77□□□□□ -0.05
RPS20-206ENST00000520490 ATAD2BQ9ULI0 1458 aa14.73□□□□□ -0.05
RPS20-206ENST00000520490 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
RPS20-206ENST00000520490 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
RPS20-206ENST00000520490 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
RPS20-206ENST00000520490 BAZ1BQ9UIG0 1483 aaKnown RBP14.66□□□□□ -0.06
RPS20-206ENST00000520490 HMGXB3Q12766 1538 aa14.65□□□□□ -0.06
RPS20-206ENST00000520490 RSF1Q96T23 1441 aaPredicted RBP14.65□□□□□ -0.06
RPS20-206ENST00000520490 WIZO95785 1651 aa14.55□□□□□ -0.08
RPS20-206ENST00000520490 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.09
RPS20-206ENST00000520490 SUPT5HO00267 1087 aaKnown RBP14.46□□□□□ -0.09
RPS20-206ENST00000520490 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
RPS20-206ENST00000520490 LAMC3Q9Y6N6 1575 aa14.31□□□□□ -0.12
RPS20-206ENST00000520490 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
RPS20-206ENST00000520490 PDS5BQ9NTI5 1447 aa14.29□□□□□ -0.12
RPS20-206ENST00000520490 ERCC6Q03468 1493 aa14.29□□□□□ -0.12
RPS20-206ENST00000520490 NESP48681 1621 aa14.26□□□□□ -0.13
RPS20-206ENST00000520490 CFTRP13569 1480 aa14.24□□□□□ -0.13
RPS20-206ENST00000520490 PLPPR3Q6T4P5 718 aa14.21□□□□□ -0.13
RPS20-206ENST00000520490 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
RPS20-206ENST00000520490 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
RPS20-206ENST00000520490 MRC2Q9UBG0 1479 aa14.07□□□□□ -0.16
RPS20-206ENST00000520490 KIF21AQ7Z4S6 1674 aa14.06□□□□□ -0.16
RPS20-206ENST00000520490 CUX2O14529 1486 aa14.06□□□□□ -0.16
RPS20-206ENST00000520490 PRDM2Q13029 1718 aa14.04□□□□□ -0.16
RPS20-206ENST00000520490 MSH5O43196 834 aa14.01□□□□□ -0.17
RPS20-206ENST00000520490 ABCC8Q09428 1581 aa14□□□□□ -0.17
RPS20-206ENST00000520490 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
RPS20-206ENST00000520490 WDR62O43379 1518 aa13.98□□□□□ -0.17
RPS20-206ENST00000520490 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
RPS20-206ENST00000520490 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.17
RPS20-206ENST00000520490 ADRA2BP18089 450 aa13.93□□□□□ -0.18
RPS20-206ENST00000520490 URB2Q14146 1524 aaKnown RBP13.93□□□□□ -0.18
RPS20-206ENST00000520490 DNMBPQ6XZF7 1577 aa13.91□□□□□ -0.18
RPS20-206ENST00000520490 TOPBP1Q92547 1522 aa13.9□□□□□ -0.18
RPS20-206ENST00000520490 WRNQ14191 1432 aaPredicted RBP eCLIP13.85□□□□□ -0.19
RPS20-206ENST00000520490 IFT140Q96RY7 1462 aa13.83□□□□□ -0.2
RPS20-206ENST00000520490 CUX1P39880 1505 aa13.81□□□□□ -0.2
RPS20-206ENST00000520490 SOGA1O94964 1423 aa13.8□□□□□ -0.2
RPS20-206ENST00000520490 POLA1P09884 1462 aaPredicted RBP13.8□□□□□ -0.2
RPS20-206ENST00000520490 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
RPS20-206ENST00000520490 POTEDQ86YR6 584 aa13.75□□□□□ -0.21
RPS20-206ENST00000520490 TOP2BQ02880 1626 aa13.75□□□□□ -0.21
RPS20-206ENST00000520490 RAD54L2Q9Y4B4 1467 aa13.72□□□□□ -0.21
RPS20-206ENST00000520490 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
RPS20-206ENST00000520490 SYNJ1O43426 1573 aa13.71□□□□□ -0.21
RPS20-206ENST00000520490 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
RPS20-206ENST00000520490 TARBP1Q13395 1621 aaKnown RBP13.69□□□□□ -0.22
RPS20-206ENST00000520490 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
RPS20-206ENST00000520490 TDRD9Q8NDG6 1382 aaKnown RBP13.68□□□□□ -0.22
RPS20-206ENST00000520490 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
RPS20-206ENST00000520490 ABCA10Q8WWZ4 1543 aa13.67□□□□□ -0.22
RPS20-206ENST00000520490 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.222e-9■■■■□ 21.3
RPS20-206ENST00000520490 EIF4G3O43432 1585 aaKnown RBP13.63□□□□□ -0.23
RPS20-206ENST00000520490 GAPVD1Q14C86 1478 aa13.62□□□□□ -0.23
RPS20-206ENST00000520490 GRIN2BQ13224 1484 aa13.61□□□□□ -0.23
RPS20-206ENST00000520490 KIF27Q86VH2 1401 aa13.59□□□□□ -0.23
RPS20-206ENST00000520490 FBLN2P98095 1184 aa13.58□□□□□ -0.24
RPS20-206ENST00000520490 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
RPS20-206ENST00000520490 CHMP7Q8WUX9 453 aaPredicted RBP13.56□□□□□ -0.24
RPS20-206ENST00000520490 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
RPS20-206ENST00000520490 ABCA5Q8WWZ7 1642 aa13.54□□□□□ -0.24
RPS20-206ENST00000520490 SNAPC4Q5SXM2 1469 aa13.54□□□□□ -0.24
RPS20-206ENST00000520490 ERICH3Q5RHP9 1530 aa13.52□□□□□ -0.25
RPS20-206ENST00000520490 SYNJ2O15056 1496 aa13.5□□□□□ -0.25
RPS20-206ENST00000520490 PBRM1Q86U86 1689 aa13.49□□□□□ -0.25
RPS20-206ENST00000520490 FHAD1B1AJZ9 1412 aa13.48□□□□□ -0.25
RPS20-206ENST00000520490 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
RPS20-206ENST00000520490 IGF1RP08069 1367 aa13.46□□□□□ -0.25
RPS20-206ENST00000520490 EEA1Q15075 1411 aa13.44□□□□□ -0.26
RPS20-206ENST00000520490 ADAMTS12P58397 1594 aa13.43□□□□□ -0.26
RPS20-206ENST00000520490 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
RPS20-206ENST00000520490 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
RPS20-206ENST00000520490 CUL7Q14999 1698 aa13.4□□□□□ -0.26
RPS20-206ENST00000520490 CHD1O14646 1710 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms