RNA–Protein interactions for RNA: ENST00000551665.1

HNRNPA1-211, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 2

Gene HNRNPA1, Length 925 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-211ENST00000551665 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
HNRNPA1-211ENST00000551665 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
HNRNPA1-211ENST00000551665 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
HNRNPA1-211ENST00000551665 NISCHQ9Y2I1 1504 aa20.5■□□□□ 0.87
HNRNPA1-211ENST00000551665 PHF23Q9BUL5 403 aaPredicted RBP20.45■□□□□ 0.86
HNRNPA1-211ENST00000551665 FOXD1Q16676 465 aa19.35■□□□□ 0.69
HNRNPA1-211ENST00000551665 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
HNRNPA1-211ENST00000551665 PIAS4Q8N2W9 510 aaPredicted RBP18.09■□□□□ 0.49
HNRNPA1-211ENST00000551665 MSH5O43196 834 aa18.07■□□□□ 0.48
HNRNPA1-211ENST00000551665 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
HNRNPA1-211ENST00000551665 CCDC180Q9P1Z9 1646 aa18.03■□□□□ 0.48
HNRNPA1-211ENST00000551665 ADRA2BP18089 450 aa18.01■□□□□ 0.47
HNRNPA1-211ENST00000551665 POTEDQ86YR6 584 aa17.95■□□□□ 0.46
HNRNPA1-211ENST00000551665 ABCC9O60706 1549 aa17.39■□□□□ 0.37
HNRNPA1-211ENST00000551665 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
HNRNPA1-211ENST00000551665 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
HNRNPA1-211ENST00000551665 DCAF1Q9Y4B6 1507 aa16.98■□□□□ 0.31
HNRNPA1-211ENST00000551665 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
HNRNPA1-211ENST00000551665 NACADO15069 1562 aa16.94■□□□□ 0.3
HNRNPA1-211ENST00000551665 RB1CC1Q8TDY2 1594 aa16.89■□□□□ 0.29
HNRNPA1-211ENST00000551665 MAPK8IP2Q13387 824 aaPredicted RBP16.6■□□□□ 0.25
HNRNPA1-211ENST00000551665 SCRIBQ14160 1630 aa16.5■□□□□ 0.23
HNRNPA1-211ENST00000551665 SHROOM4Q9ULL8 1493 aa16.45■□□□□ 0.22
HNRNPA1-211ENST00000551665 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
HNRNPA1-211ENST00000551665 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
HNRNPA1-211ENST00000551665 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
HNRNPA1-211ENST00000551665 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.2
HNRNPA1-211ENST00000551665 BICRAQ9NZM4 1560 aa16.26■□□□□ 0.19
HNRNPA1-211ENST00000551665 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
HNRNPA1-211ENST00000551665 DCAF8L1A6NGE4 600 aa15.94■□□□□ 0.14
HNRNPA1-211ENST00000551665 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
HNRNPA1-211ENST00000551665 BAZ1AQ9NRL2 1556 aaPredicted RBP15.89■□□□□ 0.13
HNRNPA1-211ENST00000551665 EIF4G1Q04637 1599 aaKnown RBP15.86■□□□□ 0.13
HNRNPA1-211ENST00000551665 SMARCA4P51532 1647 aa15.8■□□□□ 0.12
HNRNPA1-211ENST00000551665 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
HNRNPA1-211ENST00000551665 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.11
HNRNPA1-211ENST00000551665 SUPT5HO00267 1087 aaKnown RBP15.72■□□□□ 0.11
HNRNPA1-211ENST00000551665 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
HNRNPA1-211ENST00000551665 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
HNRNPA1-211ENST00000551665 CC2D2AQ9P2K1 1620 aa15.7■□□□□ 0.1
HNRNPA1-211ENST00000551665 ATAD2BQ9ULI0 1458 aa15.68■□□□□ 0.1
HNRNPA1-211ENST00000551665 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
HNRNPA1-211ENST00000551665 HOXD11P31277 338 aaPredicted RBP15.67■□□□□ 0.1
HNRNPA1-211ENST00000551665 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
HNRNPA1-211ENST00000551665 PEG3Q9GZU2 1588 aa15.64■□□□□ 0.09
HNRNPA1-211ENST00000551665 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
HNRNPA1-211ENST00000551665 BAZ1BQ9UIG0 1483 aaKnown RBP15.6■□□□□ 0.09
HNRNPA1-211ENST00000551665 WIZO95785 1651 aa15.6■□□□□ 0.09
HNRNPA1-211ENST00000551665 HMGXB3Q12766 1538 aa15.56■□□□□ 0.08
HNRNPA1-211ENST00000551665 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
HNRNPA1-211ENST00000551665 TOP2AP11388 1531 aaKnown RBP15.5■□□□□ 0.07
HNRNPA1-211ENST00000551665 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
HNRNPA1-211ENST00000551665 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.05
HNRNPA1-211ENST00000551665 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
HNRNPA1-211ENST00000551665 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
HNRNPA1-211ENST00000551665 CFTRP13569 1480 aa15.17■□□□□ 0.02
HNRNPA1-211ENST00000551665 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
HNRNPA1-211ENST00000551665 LAMC3Q9Y6N6 1575 aa15.15■□□□□ 0.02
HNRNPA1-211ENST00000551665 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
HNRNPA1-211ENST00000551665 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
HNRNPA1-211ENST00000551665 NESP48681 1621 aa15.1■□□□□ 0.01
HNRNPA1-211ENST00000551665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.01
HNRNPA1-211ENST00000551665 ERCC6Q03468 1493 aa15.03■□□□□ -0
HNRNPA1-211ENST00000551665 FANCD2Q9BXW9 1451 aa15.03■□□□□ -0
HNRNPA1-211ENST00000551665 CEP164Q9UPV0 1460 aa14.99□□□□□ -0.01
HNRNPA1-211ENST00000551665 PRDM2Q13029 1718 aa14.96□□□□□ -0.01
HNRNPA1-211ENST00000551665 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
HNRNPA1-211ENST00000551665 WRNQ14191 1432 aaPredicted RBP eCLIP14.89□□□□□ -0.03
HNRNPA1-211ENST00000551665 MRC2Q9UBG0 1479 aa14.89□□□□□ -0.03
HNRNPA1-211ENST00000551665 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
HNRNPA1-211ENST00000551665 TRIM41Q8WV44 630 aa14.86□□□□□ -0.03
HNRNPA1-211ENST00000551665 URB2Q14146 1524 aaKnown RBP14.81□□□□□ -0.04
HNRNPA1-211ENST00000551665 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
HNRNPA1-211ENST00000551665 TOPBP1Q92547 1522 aa14.8□□□□□ -0.04
HNRNPA1-211ENST00000551665 KCNA4P22459 653 aa14.79□□□□□ -0.04
HNRNPA1-211ENST00000551665 WDR62O43379 1518 aa14.78□□□□□ -0.04
HNRNPA1-211ENST00000551665 CUX1P39880 1505 aa14.78□□□□□ -0.04
HNRNPA1-211ENST00000551665 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
HNRNPA1-211ENST00000551665 TOP2BQ02880 1626 aa14.75□□□□□ -0.05
HNRNPA1-211ENST00000551665 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
HNRNPA1-211ENST00000551665 SOGA1O94964 1423 aa14.72□□□□□ -0.05
HNRNPA1-211ENST00000551665 CUX2O14529 1486 aa14.71□□□□□ -0.05
HNRNPA1-211ENST00000551665 FGD5Q6ZNL6 1462 aa14.71□□□□□ -0.05
HNRNPA1-211ENST00000551665 BIVM-ERCC5R4GMW8 1640 aa14.71□□□□□ -0.05
HNRNPA1-211ENST00000551665 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
HNRNPA1-211ENST00000551665 POLA1P09884 1462 aaPredicted RBP14.69□□□□□ -0.06
HNRNPA1-211ENST00000551665 IFT140Q96RY7 1462 aa14.68□□□□□ -0.06
HNRNPA1-211ENST00000551665 RAD54L2Q9Y4B4 1467 aa14.63□□□□□ -0.07
HNRNPA1-211ENST00000551665 CAPN15O75808 1086 aa14.6□□□□□ -0.07
HNRNPA1-211ENST00000551665 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
HNRNPA1-211ENST00000551665 ABCA10Q8WWZ4 1543 aa14.6□□□□□ -0.07
HNRNPA1-211ENST00000551665 KIF27Q86VH2 1401 aa14.59□□□□□ -0.07
HNRNPA1-211ENST00000551665 TDRD9Q8NDG6 1382 aaKnown RBP14.57□□□□□ -0.08
HNRNPA1-211ENST00000551665 TARBP1Q13395 1621 aaKnown RBP14.56□□□□□ -0.08
HNRNPA1-211ENST00000551665 EEA1Q15075 1411 aa14.55□□□□□ -0.08
HNRNPA1-211ENST00000551665 WDR97A6NE52 1622 aa14.52□□□□□ -0.08
HNRNPA1-211ENST00000551665 AQRO60306 1485 aaKnown RBP eCLIP14.52□□□□□ -0.081e-27■■■■■ 47.8
HNRNPA1-211ENST00000551665 GAPVD1Q14C86 1478 aa14.52□□□□□ -0.08
HNRNPA1-211ENST00000551665 FAM9AQ8IZU1 332 aaPredicted RBP14.52□□□□□ -0.09
HNRNPA1-211ENST00000551665 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms