RNA–Protein interactions for RNA: ENST00000423266.5

TSC22D4-203, Transcript of TSC22 domain family member 4, humanhuman

TSL 2

Gene TSC22D4, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-203ENST00000423266 NISCHQ9Y2I1 1504 aa40.35■■■■■ 4.05
TSC22D4-203ENST00000423266 CCDC180Q9P1Z9 1646 aa35.99■■■■□ 3.35
TSC22D4-203ENST00000423266 ABCC9O60706 1549 aa35.96■■■■□ 3.35
TSC22D4-203ENST00000423266 RB1CC1Q8TDY2 1594 aa34.19■■■■□ 3.06
TSC22D4-203ENST00000423266 DCAF8L2P0C7V8 631 aa34.04■■■■□ 3.04
TSC22D4-203ENST00000423266 NACADO15069 1562 aa34.02■■■■□ 3.04
TSC22D4-203ENST00000423266 DNAJC5BQ9UF47 199 aa33.69■■■□□ 2.98
TSC22D4-203ENST00000423266 MYO15BQ96JP2 1530 aa33.62■■■□□ 2.97
TSC22D4-203ENST00000423266 PABPN1Q86U42 306 aaKnown RBP eCLIP33.59■■■□□ 2.97
TSC22D4-203ENST00000423266 ZCCHC6Q5VYS8 1495 aaKnown RBP33.48■■■□□ 2.95
TSC22D4-203ENST00000423266 UNC13AQ9UPW8 1703 aa33.44■■■□□ 2.94
TSC22D4-203ENST00000423266 BICRAQ9NZM4 1560 aa33.3■■■□□ 2.92
TSC22D4-203ENST00000423266 DCAF1Q9Y4B6 1507 aa33.28■■■□□ 2.92
TSC22D4-203ENST00000423266 SCRIBQ14160 1630 aa32.91■■■□□ 2.86
TSC22D4-203ENST00000423266 SHROOM4Q9ULL8 1493 aa32.71■■■□□ 2.83
TSC22D4-203ENST00000423266 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
TSC22D4-203ENST00000423266 EIF4G1Q04637 1599 aaKnown RBP32.42■■■□□ 2.78
TSC22D4-203ENST00000423266 CECR2Q9BXF3 1484 aa32.33■■■□□ 2.77
TSC22D4-203ENST00000423266 NCAPD3P42695 1498 aa31.48■■■□□ 2.63
TSC22D4-203ENST00000423266 ATAD2BQ9ULI0 1458 aa31.43■■■□□ 2.62
TSC22D4-203ENST00000423266 SMARCA4P51532 1647 aa31.4■■■□□ 2.62
TSC22D4-203ENST00000423266 SMARCA2P51531 1590 aa31.26■■■□□ 2.59
TSC22D4-203ENST00000423266 BAZ1AQ9NRL2 1556 aaPredicted RBP31.25■■■□□ 2.59
TSC22D4-203ENST00000423266 HMGXB3Q12766 1538 aa31.19■■■□□ 2.58
TSC22D4-203ENST00000423266 MROH2BQ7Z745 1585 aa31.14■■■□□ 2.58
TSC22D4-203ENST00000423266 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
TSC22D4-203ENST00000423266 PEG3Q9GZU2 1588 aa31.08■■■□□ 2.57
TSC22D4-203ENST00000423266 NESP48681 1621 aa30.98■■■□□ 2.55
TSC22D4-203ENST00000423266 ERCC6Q03468 1493 aa30.95■■■□□ 2.54
TSC22D4-203ENST00000423266 CUX2O14529 1486 aa30.81■■■□□ 2.52
TSC22D4-203ENST00000423266 WIZO95785 1651 aa30.74■■■□□ 2.51
TSC22D4-203ENST00000423266 DNAJC5Q9H3Z4 198 aa30.67■■■□□ 2.5
TSC22D4-203ENST00000423266 LAMC3Q9Y6N6 1575 aa30.66■■■□□ 2.5
TSC22D4-203ENST00000423266 RSF1Q96T23 1441 aaPredicted RBP30.58■■■□□ 2.49
TSC22D4-203ENST00000423266 CADPSQ9ULU8 1353 aa30.54■■■□□ 2.48
TSC22D4-203ENST00000423266 THOC2Q8NI27 1593 aaKnown RBP30.53■■■□□ 2.48
TSC22D4-203ENST00000423266 PDS5BQ9NTI5 1447 aa30.5■■■□□ 2.47
TSC22D4-203ENST00000423266 KIF21AQ7Z4S6 1674 aa30.47■■■□□ 2.47
TSC22D4-203ENST00000423266 TOP2AP11388 1531 aaKnown RBP30.33■■■□□ 2.45
TSC22D4-203ENST00000423266 MRC2Q9UBG0 1479 aa30.25■■■□□ 2.43
TSC22D4-203ENST00000423266 CFTRP13569 1480 aa30.23■■■□□ 2.43
TSC22D4-203ENST00000423266 FANCD2Q9BXW9 1451 aa30.18■■■□□ 2.42
TSC22D4-203ENST00000423266 WDR62O43379 1518 aa30.16■■■□□ 2.42
TSC22D4-203ENST00000423266 CEP164Q9UPV0 1460 aa30.15■■■□□ 2.42
TSC22D4-203ENST00000423266 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
TSC22D4-203ENST00000423266 URB2Q14146 1524 aaKnown RBP29.96■■■□□ 2.39
TSC22D4-203ENST00000423266 PRDM2Q13029 1718 aa29.78■■■□□ 2.36
TSC22D4-203ENST00000423266 TOPBP1Q92547 1522 aa29.64■■■□□ 2.34
TSC22D4-203ENST00000423266 ZNF608Q9ULD9 1512 aaPredicted RBP29.58■■■□□ 2.33
TSC22D4-203ENST00000423266 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
TSC22D4-203ENST00000423266 OSCARQ8IYS5 282 aa29.51■■■□□ 2.31
TSC22D4-203ENST00000423266 ABCC8Q09428 1581 aa29.5■■■□□ 2.31
TSC22D4-203ENST00000423266 DNMBPQ6XZF7 1577 aa29.5■■■□□ 2.31
TSC22D4-203ENST00000423266 SUPT5HO00267 1087 aaKnown RBP29.42■■■□□ 2.3
TSC22D4-203ENST00000423266 TRIM41Q8WV44 630 aa29.42■■■□□ 2.3
TSC22D4-203ENST00000423266 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
TSC22D4-203ENST00000423266 TARBP1Q13395 1621 aaKnown RBP29.34■■■□□ 2.29
TSC22D4-203ENST00000423266 AQRO60306 1485 aaKnown RBP eCLIP29.34■■■□□ 2.296e-11■■■■□ 23.2
TSC22D4-203ENST00000423266 EIF4G3O43432 1585 aaKnown RBP29.32■■■□□ 2.28
TSC22D4-203ENST00000423266 RAD54L2Q9Y4B4 1467 aa29.3■■■□□ 2.28
TSC22D4-203ENST00000423266 SOGA1O94964 1423 aa29.24■■■□□ 2.27
TSC22D4-203ENST00000423266 CUX1P39880 1505 aa29.23■■■□□ 2.27
TSC22D4-203ENST00000423266 TDRD9Q8NDG6 1382 aaKnown RBP29.2■■■□□ 2.26
TSC22D4-203ENST00000423266 FGD5Q6ZNL6 1462 aa29.2■■■□□ 2.26
TSC22D4-203ENST00000423266 RIMBP3CA6NJZ7 1639 aa29.07■■■□□ 2.24
TSC22D4-203ENST00000423266 RIMBP3BA6NNM3 1639 aa29.07■■■□□ 2.24
TSC22D4-203ENST00000423266 FBLN2P98095 1184 aa29.07■■■□□ 2.24
TSC22D4-203ENST00000423266 RIMBP3Q9UFD9 1639 aa29.07■■■□□ 2.24
TSC22D4-203ENST00000423266 CHD1O14646 1710 aa29.05■■■□□ 2.24
TSC22D4-203ENST00000423266 ARHGEF11O15085 1522 aa29.01■■■□□ 2.23
TSC22D4-203ENST00000423266 SNAPC4Q5SXM2 1469 aa28.99■■■□□ 2.23
TSC22D4-203ENST00000423266 WDR97A6NE52 1622 aa28.94■■■□□ 2.22
TSC22D4-203ENST00000423266 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
TSC22D4-203ENST00000423266 CHMP7Q8WUX9 453 aaPredicted RBP28.87■■■□□ 2.21
TSC22D4-203ENST00000423266 MAGI1Q96QZ7 1491 aaPredicted RBP28.86■■■□□ 2.21
TSC22D4-203ENST00000423266 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
TSC22D4-203ENST00000423266 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
TSC22D4-203ENST00000423266 CYB5RLQ6IPT4 315 aa28.85■■■□□ 2.21
TSC22D4-203ENST00000423266 SYNJ2O15056 1496 aa28.79■■■□□ 2.2
TSC22D4-203ENST00000423266 WRNQ14191 1432 aaPredicted RBP eCLIP28.79■■■□□ 2.2
TSC22D4-203ENST00000423266 ABCA5Q8WWZ7 1642 aa28.78■■■□□ 2.2
TSC22D4-203ENST00000423266 SYNJ1O43426 1573 aa28.78■■■□□ 2.2
TSC22D4-203ENST00000423266 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
TSC22D4-203ENST00000423266 CLASP1Q7Z460 1538 aa28.77■■■□□ 2.2
TSC22D4-203ENST00000423266 PBRM1Q86U86 1689 aa28.76■■■□□ 2.19
TSC22D4-203ENST00000423266 TOP2BQ02880 1626 aa28.76■■■□□ 2.19
TSC22D4-203ENST00000423266 BIVM-ERCC5R4GMW8 1640 aa28.73■■■□□ 2.19
TSC22D4-203ENST00000423266 GRIN2AQ12879 1464 aa28.55■■■□□ 2.16
TSC22D4-203ENST00000423266 ADAMTS12P58397 1594 aa28.54■■■□□ 2.16
TSC22D4-203ENST00000423266 FHAD1B1AJZ9 1412 aa28.5■■■□□ 2.15
TSC22D4-203ENST00000423266 NUP160Q12769 1436 aa28.47■■■□□ 2.15
TSC22D4-203ENST00000423266 ERICH3Q5RHP9 1530 aa28.47■■■□□ 2.15
TSC22D4-203ENST00000423266 CEP170Q5SW79 1584 aa28.46■■■□□ 2.15
TSC22D4-203ENST00000423266 ERCC6L2Q5T890 1561 aa28.42■■■□□ 2.14
TSC22D4-203ENST00000423266 TRHP20396 242 aaPredicted RBP28.42■■■□□ 2.14
TSC22D4-203ENST00000423266 SHROOM2Q13796 1616 aa28.28■■■□□ 2.12
TSC22D4-203ENST00000423266 IGF1RP08069 1367 aa28.26■■■□□ 2.12
TSC22D4-203ENST00000423266 JPH4Q96JJ6 628 aa28.22■■■□□ 2.11
TSC22D4-203ENST00000423266 KIF27Q86VH2 1401 aa28.2■■■□□ 2.11
TSC22D4-203ENST00000423266 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms