RNA–Protein interactions for RNA: ENST00000553061.1

AC078778.2-201, humanhuman

TSL 5 BASIC

Gene AC078778.2, Length 567 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078778.2-201ENST00000553061 AEBP2Q6ZN18 517 aaPredicted RBP27.05■■□□□ 1.92
AC078778.2-201ENST00000553061 CHIC1Q5VXU3 224 aa25.73■■□□□ 1.71
AC078778.2-201ENST00000553061 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
AC078778.2-201ENST00000553061 PHF23Q9BUL5 403 aaPredicted RBP22.74■■□□□ 1.23
AC078778.2-201ENST00000553061 FOXD1Q16676 465 aa21.48■■□□□ 1.03
AC078778.2-201ENST00000553061 PLPPR3Q6T4P5 718 aa20.55■□□□□ 0.88
AC078778.2-201ENST00000553061 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
AC078778.2-201ENST00000553061 MSH5O43196 834 aa20.07■□□□□ 0.8
AC078778.2-201ENST00000553061 PIAS4Q8N2W9 510 aaPredicted RBP20.04■□□□□ 0.8
AC078778.2-201ENST00000553061 ADRA2BP18089 450 aa20.03■□□□□ 0.8
AC078778.2-201ENST00000553061 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
AC078778.2-201ENST00000553061 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
AC078778.2-201ENST00000553061 SCAF1Q9H7N4 1312 aaKnown RBP18.31■□□□□ 0.52
AC078778.2-201ENST00000553061 DMRT2Q9Y5R5 561 aa18.3■□□□□ 0.52
AC078778.2-201ENST00000553061 PPP4R3CPQ6ZMV5 832 aa18.02■□□□□ 0.48
AC078778.2-201ENST00000553061 CNKSR2Q8WXI2 1034 aa17.68■□□□□ 0.42
AC078778.2-201ENST00000553061 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
AC078778.2-201ENST00000553061 RNF216Q9NWF9 866 aaPredicted RBP17.52■□□□□ 0.4
AC078778.2-201ENST00000553061 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
AC078778.2-201ENST00000553061 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
AC078778.2-201ENST00000553061 RNF39Q9H2S5 420 aa17.16■□□□□ 0.34
AC078778.2-201ENST00000553061 CACNB1Q02641 598 aaPredicted RBP17.15■□□□□ 0.34
AC078778.2-201ENST00000553061 NPM3O75607 178 aaKnown RBP17.1■□□□□ 0.33
AC078778.2-201ENST00000553061 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.32
AC078778.2-201ENST00000553061 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
AC078778.2-201ENST00000553061 KCNA4P22459 653 aa16.81■□□□□ 0.28
AC078778.2-201ENST00000553061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.271e-23■□□□□ 11.2
AC078778.2-201ENST00000553061 NISCHQ9Y2I1 1504 aa16.55■□□□□ 0.24
AC078778.2-201ENST00000553061 U3KPZ7 1027 aaPredicted RBP16.46■□□□□ 0.23
AC078778.2-201ENST00000553061 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
AC078778.2-201ENST00000553061 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
AC078778.2-201ENST00000553061 CAPN15O75808 1086 aa16.11■□□□□ 0.17
AC078778.2-201ENST00000553061 DSG3P32926 999 aa16.07■□□□□ 0.16
AC078778.2-201ENST00000553061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
AC078778.2-201ENST00000553061 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
AC078778.2-201ENST00000553061 APLP2Q06481 763 aa15.96■□□□□ 0.15
AC078778.2-201ENST00000553061 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
AC078778.2-201ENST00000553061 ZNF219Q9P2Y4 722 aaPredicted RBP15.87■□□□□ 0.13
AC078778.2-201ENST00000553061 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
AC078778.2-201ENST00000553061 SLC4A1APQ9BWU0 796 aaKnown RBP15.85■□□□□ 0.13
AC078778.2-201ENST00000553061 MYCNP04198 464 aaPredicted RBP15.81■□□□□ 0.12
AC078778.2-201ENST00000553061 ABCB7O75027 752 aa15.75■□□□□ 0.11
AC078778.2-201ENST00000553061 FOXD4L1Q9NU39 408 aa15.67■□□□□ 0.1
AC078778.2-201ENST00000553061 ABCC9O60706 1549 aa15.55■□□□□ 0.08
AC078778.2-201ENST00000553061 ZBTB22O15209 634 aa15.49■□□□□ 0.07
AC078778.2-201ENST00000553061 POLA2Q14181 598 aa15.48■□□□□ 0.07
AC078778.2-201ENST00000553061 ATF5Q9Y2D1 282 aaPredicted RBP15.45■□□□□ 0.06
AC078778.2-201ENST00000553061 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
AC078778.2-201ENST00000553061 POTEHQ6S545 545 aa15.29■□□□□ 0.04
AC078778.2-201ENST00000553061 ATXN8OSP0DMR3 200 aa15.21■□□□□ 0.03
AC078778.2-201ENST00000553061 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
AC078778.2-201ENST00000553061 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
AC078778.2-201ENST00000553061 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
AC078778.2-201ENST00000553061 AKT1S1Q96B36 256 aa14.98□□□□□ -0.01
AC078778.2-201ENST00000553061 CHRDL2Q6WN34 429 aa14.96□□□□□ -0.01
AC078778.2-201ENST00000553061 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
AC078778.2-201ENST00000553061 FBLN2P98095 1184 aa14.79□□□□□ -0.04
AC078778.2-201ENST00000553061 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
AC078778.2-201ENST00000553061 MKRN4PQ13434 485 aaPredicted RBP14.76□□□□□ -0.05
AC078778.2-201ENST00000553061 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
AC078778.2-201ENST00000553061 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
AC078778.2-201ENST00000553061 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
AC078778.2-201ENST00000553061 PITPNM1O00562 1244 aa14.68□□□□□ -0.06
AC078778.2-201ENST00000553061 PIP4P2Q8N4L2 257 aa14.62□□□□□ -0.07
AC078778.2-201ENST00000553061 RB1CC1Q8TDY2 1594 aa14.58□□□□□ -0.08
AC078778.2-201ENST00000553061 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.08
AC078778.2-201ENST00000553061 SSUH2Q9Y2M2 353 aa14.57□□□□□ -0.08
AC078778.2-201ENST00000553061 EHMT2Q96KQ7 1210 aa14.56□□□□□ -0.08
AC078778.2-201ENST00000553061 ZNF692Q9BU19 519 aaPredicted RBP14.52□□□□□ -0.09
AC078778.2-201ENST00000553061 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
AC078778.2-201ENST00000553061 SPDYE1Q8NFV5 336 aaPredicted RBP14.43□□□□□ -0.1
AC078778.2-201ENST00000553061 SP7Q8TDD2 431 aaPredicted RBP14.36□□□□□ -0.11
AC078778.2-201ENST00000553061 CLEC11AQ9Y240 323 aa14.36□□□□□ -0.11
AC078778.2-201ENST00000553061 NACADO15069 1562 aa14.35□□□□□ -0.11
AC078778.2-201ENST00000553061 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
AC078778.2-201ENST00000553061 HAX1O00165 279 aa14.28□□□□□ -0.12
AC078778.2-201ENST00000553061 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
AC078778.2-201ENST00000553061 UNC13AQ9UPW8 1703 aa14.22□□□□□ -0.13
AC078778.2-201ENST00000553061 EVX2Q03828 476 aa14.17□□□□□ -0.14
AC078778.2-201ENST00000553061 PRR29P0C7W0 189 aa14.15□□□□□ -0.14
AC078778.2-201ENST00000553061 DNAJC5Q9H3Z4 198 aa14.14□□□□□ -0.15
AC078778.2-201ENST00000553061 BICRAQ9NZM4 1560 aa14.12□□□□□ -0.15
AC078778.2-201ENST00000553061 CHADLQ6NUI6 762 aa14.11□□□□□ -0.15
AC078778.2-201ENST00000553061 C19orf67A6NJJ6 358 aa14.1□□□□□ -0.15
AC078778.2-201ENST00000553061 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
AC078778.2-201ENST00000553061 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
AC078778.2-201ENST00000553061 CC2D2AQ9P2K1 1620 aa14□□□□□ -0.17
AC078778.2-201ENST00000553061 MYO15BQ96JP2 1530 aa13.95□□□□□ -0.18
AC078778.2-201ENST00000553061 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
AC078778.2-201ENST00000553061 FARP1Q9Y4F1 1045 aaPredicted RBP13.94□□□□□ -0.18
AC078778.2-201ENST00000553061 SHROOM4Q9ULL8 1493 aa13.87□□□□□ -0.19
AC078778.2-201ENST00000553061 CREBZFQ9NS37 354 aa13.87□□□□□ -0.19
AC078778.2-201ENST00000553061 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
AC078778.2-201ENST00000553061 GABBR2O75899 941 aa13.84□□□□□ -0.19
AC078778.2-201ENST00000553061 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
AC078778.2-201ENST00000553061 PROM2Q8N271 834 aa13.8□□□□□ -0.2
AC078778.2-201ENST00000553061 SCRIBQ14160 1630 aa13.71□□□□□ -0.22
AC078778.2-201ENST00000553061 MNX1P50219 401 aaPredicted RBP13.67□□□□□ -0.22
AC078778.2-201ENST00000553061 CLCN6P51797 869 aa13.67□□□□□ -0.22
AC078778.2-201ENST00000553061 ZNF579Q8NAF0 562 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms