RNA–Protein interactions for RNA: ENST00000547566.5

HNRNPA1-205, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 1 (best)

Gene HNRNPA1, Length 1,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-205ENST00000547566 NISCHQ9Y2I1 1504 aa40.51■■■■■ 4.08
HNRNPA1-205ENST00000547566 CCDC180Q9P1Z9 1646 aa36.41■■■■□ 3.42
HNRNPA1-205ENST00000547566 ABCC9O60706 1549 aa36.3■■■■□ 3.4
HNRNPA1-205ENST00000547566 RB1CC1Q8TDY2 1594 aa34.6■■■■□ 3.13
HNRNPA1-205ENST00000547566 NACADO15069 1562 aa34.36■■■■□ 3.09
HNRNPA1-205ENST00000547566 DCAF8L2P0C7V8 631 aa34.11■■■■□ 3.05
HNRNPA1-205ENST00000547566 DNAJC5BQ9UF47 199 aa34.03■■■■□ 3.04
HNRNPA1-205ENST00000547566 UNC13AQ9UPW8 1703 aa33.96■■■■□ 3.03
HNRNPA1-205ENST00000547566 MYO15BQ96JP2 1530 aa33.89■■■■□ 3.02
HNRNPA1-205ENST00000547566 PABPN1Q86U42 306 aaKnown RBP eCLIP33.77■■■■□ 3
HNRNPA1-205ENST00000547566 BICRAQ9NZM4 1560 aa33.62■■■□□ 2.97
HNRNPA1-205ENST00000547566 ZCCHC6Q5VYS8 1495 aaKnown RBP33.57■■■□□ 2.97
HNRNPA1-205ENST00000547566 DCAF1Q9Y4B6 1507 aa33.48■■■□□ 2.95
HNRNPA1-205ENST00000547566 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
HNRNPA1-205ENST00000547566 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
HNRNPA1-205ENST00000547566 CC2D2AQ9P2K1 1620 aa32.85■■■□□ 2.85
HNRNPA1-205ENST00000547566 EIF4G1Q04637 1599 aaKnown RBP32.77■■■□□ 2.84
HNRNPA1-205ENST00000547566 CECR2Q9BXF3 1484 aa32.7■■■□□ 2.83
HNRNPA1-205ENST00000547566 NCAPD3P42695 1498 aa31.7■■■□□ 2.66
HNRNPA1-205ENST00000547566 SMARCA4P51532 1647 aa31.63■■■□□ 2.65
HNRNPA1-205ENST00000547566 ATAD2BQ9ULI0 1458 aa31.61■■■□□ 2.65
HNRNPA1-205ENST00000547566 SMARCA2P51531 1590 aa31.54■■■□□ 2.64
HNRNPA1-205ENST00000547566 HMGXB3Q12766 1538 aa31.49■■■□□ 2.63
HNRNPA1-205ENST00000547566 BAZ1AQ9NRL2 1556 aaPredicted RBP31.44■■■□□ 2.62
HNRNPA1-205ENST00000547566 ERCC6Q03468 1493 aa31.33■■■□□ 2.61
HNRNPA1-205ENST00000547566 PEG3Q9GZU2 1588 aa31.32■■■□□ 2.6
HNRNPA1-205ENST00000547566 BAZ1BQ9UIG0 1483 aaKnown RBP31.3■■■□□ 2.6
HNRNPA1-205ENST00000547566 CUX2O14529 1486 aa31.29■■■□□ 2.6
HNRNPA1-205ENST00000547566 DNAJC5Q9H3Z4 198 aa31.23■■■□□ 2.59
HNRNPA1-205ENST00000547566 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
HNRNPA1-205ENST00000547566 NESP48681 1621 aa31.2■■■□□ 2.59
HNRNPA1-205ENST00000547566 LAMC3Q9Y6N6 1575 aa31.02■■■□□ 2.56
HNRNPA1-205ENST00000547566 THOC2Q8NI27 1593 aaKnown RBP30.93■■■□□ 2.54
HNRNPA1-205ENST00000547566 KIF21AQ7Z4S6 1674 aa30.9■■■□□ 2.54
HNRNPA1-205ENST00000547566 WIZO95785 1651 aa30.88■■■□□ 2.53
HNRNPA1-205ENST00000547566 PDS5BQ9NTI5 1447 aa30.79■■■□□ 2.52
HNRNPA1-205ENST00000547566 CADPSQ9ULU8 1353 aa30.72■■■□□ 2.51
HNRNPA1-205ENST00000547566 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
HNRNPA1-205ENST00000547566 MRC2Q9UBG0 1479 aa30.54■■■□□ 2.48
HNRNPA1-205ENST00000547566 WDR62O43379 1518 aa30.48■■■□□ 2.47
HNRNPA1-205ENST00000547566 TOP2AP11388 1531 aaKnown RBP30.46■■■□□ 2.47
HNRNPA1-205ENST00000547566 CEP164Q9UPV0 1460 aa30.42■■■□□ 2.46
HNRNPA1-205ENST00000547566 CFTRP13569 1480 aa30.4■■■□□ 2.46
HNRNPA1-205ENST00000547566 FANCD2Q9BXW9 1451 aa30.38■■■□□ 2.45
HNRNPA1-205ENST00000547566 PRDM2Q13029 1718 aa30.25■■■□□ 2.43
HNRNPA1-205ENST00000547566 URB2Q14146 1524 aaKnown RBP30.15■■■□□ 2.42
HNRNPA1-205ENST00000547566 CCDC88BA6NC98 1476 aa30.1■■■□□ 2.41
HNRNPA1-205ENST00000547566 TRIM41Q8WV44 630 aa29.85■■■□□ 2.37
HNRNPA1-205ENST00000547566 OSCARQ8IYS5 282 aa29.84■■■□□ 2.37
HNRNPA1-205ENST00000547566 TOPBP1Q92547 1522 aa29.83■■■□□ 2.37
HNRNPA1-205ENST00000547566 IFT140Q96RY7 1462 aa29.8■■■□□ 2.36
HNRNPA1-205ENST00000547566 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
HNRNPA1-205ENST00000547566 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.36
HNRNPA1-205ENST00000547566 DNMBPQ6XZF7 1577 aa29.74■■■□□ 2.35
HNRNPA1-205ENST00000547566 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.33
HNRNPA1-205ENST00000547566 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
HNRNPA1-205ENST00000547566 POLA1P09884 1462 aaPredicted RBP29.52■■■□□ 2.32
HNRNPA1-205ENST00000547566 RIMBP3CA6NJZ7 1639 aa29.52■■■□□ 2.32
HNRNPA1-205ENST00000547566 RIMBP3BA6NNM3 1639 aa29.52■■■□□ 2.32
HNRNPA1-205ENST00000547566 RIMBP3Q9UFD9 1639 aa29.52■■■□□ 2.32
HNRNPA1-205ENST00000547566 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.314e-14■■■■■ 27.9
HNRNPA1-205ENST00000547566 CHD1O14646 1710 aa29.48■■■□□ 2.31
HNRNPA1-205ENST00000547566 RAD54L2Q9Y4B4 1467 aa29.41■■■□□ 2.3
HNRNPA1-205ENST00000547566 ARHGEF11O15085 1522 aa29.4■■■□□ 2.3
HNRNPA1-205ENST00000547566 SOGA1O94964 1423 aa29.37■■■□□ 2.29
HNRNPA1-205ENST00000547566 FGD5Q6ZNL6 1462 aa29.34■■■□□ 2.29
HNRNPA1-205ENST00000547566 CUX1P39880 1505 aa29.33■■■□□ 2.29
HNRNPA1-205ENST00000547566 WDR97A6NE52 1622 aa29.3■■■□□ 2.28
HNRNPA1-205ENST00000547566 TDRD9Q8NDG6 1382 aaKnown RBP29.29■■■□□ 2.28
HNRNPA1-205ENST00000547566 FBLN2P98095 1184 aa29.26■■■□□ 2.27
HNRNPA1-205ENST00000547566 SNAPC4Q5SXM2 1469 aa29.19■■■□□ 2.26
HNRNPA1-205ENST00000547566 SUPT5HO00267 1087 aaKnown RBP29.18■■■□□ 2.26
HNRNPA1-205ENST00000547566 CYB5RLQ6IPT4 315 aa29.13■■■□□ 2.25
HNRNPA1-205ENST00000547566 GRIN2BQ13224 1484 aa29.12■■■□□ 2.25
HNRNPA1-205ENST00000547566 MAGI1Q96QZ7 1491 aaPredicted RBP29.12■■■□□ 2.25
HNRNPA1-205ENST00000547566 ARAP1Q96P48 1450 aa29.1■■■□□ 2.25
HNRNPA1-205ENST00000547566 PBRM1Q86U86 1689 aa29.1■■■□□ 2.25
HNRNPA1-205ENST00000547566 CLASP1Q7Z460 1538 aa29.07■■■□□ 2.24
HNRNPA1-205ENST00000547566 CHMP7Q8WUX9 453 aaPredicted RBP29.06■■■□□ 2.24
HNRNPA1-205ENST00000547566 SYNJ1O43426 1573 aa29.05■■■□□ 2.24
HNRNPA1-205ENST00000547566 SYNJ2O15056 1496 aa29.03■■■□□ 2.24
HNRNPA1-205ENST00000547566 GAPVD1Q14C86 1478 aa29.03■■■□□ 2.24
HNRNPA1-205ENST00000547566 ABCA10Q8WWZ4 1543 aa29.01■■■□□ 2.23
HNRNPA1-205ENST00000547566 ABCA5Q8WWZ7 1642 aa29■■■□□ 2.23
HNRNPA1-205ENST00000547566 BIVM-ERCC5R4GMW8 1640 aa28.91■■■□□ 2.22
HNRNPA1-205ENST00000547566 TOP2BQ02880 1626 aa28.88■■■□□ 2.21
HNRNPA1-205ENST00000547566 WRNQ14191 1432 aaPredicted RBP eCLIP28.86■■■□□ 2.21
HNRNPA1-205ENST00000547566 TRHP20396 242 aaPredicted RBP28.79■■■□□ 2.2
HNRNPA1-205ENST00000547566 ADAMTS12P58397 1594 aa28.76■■■□□ 2.19
HNRNPA1-205ENST00000547566 GRIN2AQ12879 1464 aa28.75■■■□□ 2.19
HNRNPA1-205ENST00000547566 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
HNRNPA1-205ENST00000547566 NUP160Q12769 1436 aa28.66■■■□□ 2.18
HNRNPA1-205ENST00000547566 ERICH3Q5RHP9 1530 aa28.65■■■□□ 2.18
HNRNPA1-205ENST00000547566 FHAD1B1AJZ9 1412 aa28.64■■■□□ 2.18
HNRNPA1-205ENST00000547566 ERCC6L2Q5T890 1561 aa28.62■■■□□ 2.17
HNRNPA1-205ENST00000547566 SHROOM2Q13796 1616 aa28.58■■■□□ 2.17
HNRNPA1-205ENST00000547566 RUSC2Q8N2Y8 1516 aa28.37■■■□□ 2.13
HNRNPA1-205ENST00000547566 PRG4Q92954 1404 aaPredicted RBP28.36■■■□□ 2.13
HNRNPA1-205ENST00000547566 JPH4Q96JJ6 628 aa28.34■■■□□ 2.13
HNRNPA1-205ENST00000547566 CUL7Q14999 1698 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms