RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 NISCHQ9Y2I1 1504 aa51.3■■■■■ 5.8
PPFIA3-212ENST00000602897 CCDC180Q9P1Z9 1646 aa45.62■■■■■ 4.89
PPFIA3-212ENST00000602897 ABCC9O60706 1549 aa44.95■■■■■ 4.79
PPFIA3-212ENST00000602897 RB1CC1Q8TDY2 1594 aa43.1■■■■■ 4.49
PPFIA3-212ENST00000602897 DCAF8L2P0C7V8 631 aa43.08■■■■■ 4.49
PPFIA3-212ENST00000602897 NACADO15069 1562 aa42.99■■■■■ 4.47
PPFIA3-212ENST00000602897 ZCCHC6Q5VYS8 1495 aaKnown RBP42.67■■■■■ 4.42
PPFIA3-212ENST00000602897 MYO15BQ96JP2 1530 aa42.65■■■■■ 4.42
PPFIA3-212ENST00000602897 DCAF1Q9Y4B6 1507 aa42.4■■■■■ 4.38
PPFIA3-212ENST00000602897 UNC13AQ9UPW8 1703 aa42.04■■■■■ 4.32
PPFIA3-212ENST00000602897 PABPN1Q86U42 306 aaKnown RBP eCLIP42.01■■■■■ 4.325e-6■■■■□ 22.2
PPFIA3-212ENST00000602897 BICRAQ9NZM4 1560 aa41.78■■■■■ 4.28
PPFIA3-212ENST00000602897 SCRIBQ14160 1630 aa41.68■■■■■ 4.26
PPFIA3-212ENST00000602897 DNAJC5BQ9UF47 199 aa41.45■■■■■ 4.23
PPFIA3-212ENST00000602897 SHROOM4Q9ULL8 1493 aa41.31■■■■■ 4.2
PPFIA3-212ENST00000602897 EIF4G1Q04637 1599 aaKnown RBP40.71■■■■■ 4.11
PPFIA3-212ENST00000602897 CC2D2AQ9P2K1 1620 aa40.59■■■■■ 4.09
PPFIA3-212ENST00000602897 CECR2Q9BXF3 1484 aa40.4■■■■■ 4.06
PPFIA3-212ENST00000602897 SMARCA4P51532 1647 aa39.82■■■■□ 3.97
PPFIA3-212ENST00000602897 BAZ1AQ9NRL2 1556 aaPredicted RBP39.77■■■■□ 3.96
PPFIA3-212ENST00000602897 NCAPD3P42695 1498 aa39.7■■■■□ 3.95
PPFIA3-212ENST00000602897 ATAD2BQ9ULI0 1458 aa39.7■■■■□ 3.95
PPFIA3-212ENST00000602897 SMARCA2P51531 1590 aa39.62■■■■□ 3.93
PPFIA3-212ENST00000602897 MROH2BQ7Z745 1585 aa39.54■■■■□ 3.92
PPFIA3-212ENST00000602897 HMGXB3Q12766 1538 aa39.45■■■■□ 3.91
PPFIA3-212ENST00000602897 PEG3Q9GZU2 1588 aa39.42■■■■□ 3.9
PPFIA3-212ENST00000602897 SUPT5HO00267 1087 aaKnown RBP39.41■■■■□ 3.9
PPFIA3-212ENST00000602897 BAZ1BQ9UIG0 1483 aaKnown RBP39.37■■■■□ 3.89
PPFIA3-212ENST00000602897 WIZO95785 1651 aa39.08■■■■□ 3.85
PPFIA3-212ENST00000602897 RSF1Q96T23 1441 aaPredicted RBP39.05■■■■□ 3.84
PPFIA3-212ENST00000602897 NESP48681 1621 aa38.82■■■■□ 3.81
PPFIA3-212ENST00000602897 ERCC6Q03468 1493 aa38.76■■■■□ 3.8
PPFIA3-212ENST00000602897 TOP2AP11388 1531 aaKnown RBP38.66■■■■□ 3.78
PPFIA3-212ENST00000602897 LAMC3Q9Y6N6 1575 aa38.66■■■■□ 3.78
PPFIA3-212ENST00000602897 CADPSQ9ULU8 1353 aa38.55■■■■□ 3.76
PPFIA3-212ENST00000602897 PDS5BQ9NTI5 1447 aa38.45■■■■□ 3.75
PPFIA3-212ENST00000602897 CUX2O14529 1486 aa38.37■■■■□ 3.73
PPFIA3-212ENST00000602897 KIF21AQ7Z4S6 1674 aa38.29■■■■□ 3.72
PPFIA3-212ENST00000602897 CFTRP13569 1480 aa38.26■■■■□ 3.72
PPFIA3-212ENST00000602897 CCDC88BA6NC98 1476 aa38.24■■■■□ 3.71
PPFIA3-212ENST00000602897 THOC2Q8NI27 1593 aaKnown RBP38.22■■■■□ 3.71
PPFIA3-212ENST00000602897 FANCD2Q9BXW9 1451 aa38.1■■■■□ 3.69
PPFIA3-212ENST00000602897 CEP164Q9UPV0 1460 aa38.07■■■■□ 3.68
PPFIA3-212ENST00000602897 MRC2Q9UBG0 1479 aa38.05■■■■□ 3.68
PPFIA3-212ENST00000602897 WDR62O43379 1518 aa37.9■■■■□ 3.66
PPFIA3-212ENST00000602897 PRDM2Q13029 1718 aa37.85■■■■□ 3.65
PPFIA3-212ENST00000602897 CHIC1Q5VXU3 224 aa37.84■■■■□ 3.65
PPFIA3-212ENST00000602897 URB2Q14146 1524 aaKnown RBP37.72■■■■□ 3.63
PPFIA3-212ENST00000602897 DNAJC5Q9H3Z4 198 aa37.48■■■■□ 3.59
PPFIA3-212ENST00000602897 TOPBP1Q92547 1522 aa37.46■■■■□ 3.59
PPFIA3-212ENST00000602897 ABCC8Q09428 1581 aa37.44■■■■□ 3.58
PPFIA3-212ENST00000602897 DNMBPQ6XZF7 1577 aa37.38■■■■□ 3.57
PPFIA3-212ENST00000602897 IFT140Q96RY7 1462 aa37.28■■■■□ 3.56
PPFIA3-212ENST00000602897 TRIM41Q8WV44 630 aa37.18■■■■□ 3.54
PPFIA3-212ENST00000602897 ZNF608Q9ULD9 1512 aaPredicted RBP37.14■■■■□ 3.54
PPFIA3-212ENST00000602897 POLA1P09884 1462 aaPredicted RBP37.13■■■■□ 3.53
PPFIA3-212ENST00000602897 CUX1P39880 1505 aa37.1■■■■□ 3.53
PPFIA3-212ENST00000602897 TARBP1Q13395 1621 aaKnown RBP37.04■■■■□ 3.52
PPFIA3-212ENST00000602897 FGD5Q6ZNL6 1462 aa37.02■■■■□ 3.52
PPFIA3-212ENST00000602897 SOGA1O94964 1423 aa37■■■■□ 3.51
PPFIA3-212ENST00000602897 RAD54L2Q9Y4B4 1467 aa37■■■■□ 3.51
PPFIA3-212ENST00000602897 EIF4G3O43432 1585 aaKnown RBP36.94■■■■□ 3.5
PPFIA3-212ENST00000602897 AQRO60306 1485 aaKnown RBP eCLIP36.93■■■■□ 3.5
PPFIA3-212ENST00000602897 TDRD9Q8NDG6 1382 aaKnown RBP36.84■■■■□ 3.49
PPFIA3-212ENST00000602897 OSCARQ8IYS5 282 aa36.82■■■■□ 3.49
PPFIA3-212ENST00000602897 WRNQ14191 1432 aaPredicted RBP eCLIP36.82■■■■□ 3.49
PPFIA3-212ENST00000602897 TOP2BQ02880 1626 aa36.71■■■■□ 3.47
PPFIA3-212ENST00000602897 SYNJ1O43426 1573 aa36.7■■■■□ 3.47
PPFIA3-212ENST00000602897 WDR97A6NE52 1622 aa36.7■■■■□ 3.47
PPFIA3-212ENST00000602897 BIVM-ERCC5R4GMW8 1640 aa36.68■■■■□ 3.46
PPFIA3-212ENST00000602897 ABCA10Q8WWZ4 1543 aa36.64■■■■□ 3.46
PPFIA3-212ENST00000602897 FBLN2P98095 1184 aa36.59■■■■□ 3.45
PPFIA3-212ENST00000602897 GRIN2BQ13224 1484 aa36.58■■■■□ 3.45
PPFIA3-212ENST00000602897 GAPVD1Q14C86 1478 aa36.56■■■■□ 3.44
PPFIA3-212ENST00000602897 SNAPC4Q5SXM2 1469 aa36.56■■■■□ 3.44
PPFIA3-212ENST00000602897 CHD1O14646 1710 aa36.49■■■■□ 3.43
PPFIA3-212ENST00000602897 MAGI1Q96QZ7 1491 aaPredicted RBP36.49■■■■□ 3.43
PPFIA3-212ENST00000602897 ABCA5Q8WWZ7 1642 aa36.48■■■■□ 3.43
PPFIA3-212ENST00000602897 CHMP7Q8WUX9 453 aaPredicted RBP36.42■■■■□ 3.42
PPFIA3-212ENST00000602897 PBRM1Q86U86 1689 aa36.42■■■■□ 3.42
PPFIA3-212ENST00000602897 EEA1Q15075 1411 aa36.4■■■■□ 3.42
PPFIA3-212ENST00000602897 SYNJ2O15056 1496 aa36.36■■■■□ 3.41
PPFIA3-212ENST00000602897 FAM9AQ8IZU1 332 aaPredicted RBP36.33■■■■□ 3.41
PPFIA3-212ENST00000602897 LOC105371045A0A1W2PR82 267 aa36.28■■■■□ 3.4
PPFIA3-212ENST00000602897 ERICH3Q5RHP9 1530 aa36.18■■■■□ 3.38
PPFIA3-212ENST00000602897 RIMBP3CA6NJZ7 1639 aa36.17■■■■□ 3.38
PPFIA3-212ENST00000602897 RIMBP3BA6NNM3 1639 aa36.17■■■■□ 3.38
PPFIA3-212ENST00000602897 RIMBP3Q9UFD9 1639 aa36.17■■■■□ 3.38
PPFIA3-212ENST00000602897 ARHGEF11O15085 1522 aa36.17■■■■□ 3.38
PPFIA3-212ENST00000602897 ADAMTS12P58397 1594 aa36.15■■■■□ 3.38
PPFIA3-212ENST00000602897 FHAD1B1AJZ9 1412 aa36.13■■■■□ 3.37
PPFIA3-212ENST00000602897 CLASP1Q7Z460 1538 aa36.11■■■■□ 3.37
PPFIA3-212ENST00000602897 GRIN2AQ12879 1464 aa36.1■■■■□ 3.37
PPFIA3-212ENST00000602897 CSRNP3Q8WYN3 585 aa36.1■■■■□ 3.37
PPFIA3-212ENST00000602897 KIF27Q86VH2 1401 aa36.07■■■■□ 3.36
PPFIA3-212ENST00000602897 RUSC2Q8N2Y8 1516 aa36.05■■■■□ 3.36
PPFIA3-212ENST00000602897 IGF1RP08069 1367 aa35.95■■■■□ 3.35
PPFIA3-212ENST00000602897 NUP160Q12769 1436 aa35.94■■■■□ 3.34
PPFIA3-212ENST00000602897 CYB5RLQ6IPT4 315 aa35.93■■■■□ 3.34
PPFIA3-212ENST00000602897 CEP170Q5SW79 1584 aa35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms