Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 AC004066.1-201ENST00000502488 802 ntBASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP1Q8TDR0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 INTS4P1-203ENST00000641008 3683 ntBASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 AC104457.1-201ENST00000401024 814 ntBASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 TPRX2P-201ENST00000535362 881 ntBASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 AL390955.2-201ENST00000603032 514 ntBASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 CLK3P2-201ENST00000427566 1453 ntBASIC15.91■□□□□ 0.14
TRAF3IP1Q8TDR0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms