RNA–Protein interactions for RNA: ENST00000515640.5

C5orf38-207, Transcript of chromosome 5 open reading frame 38, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C5orf38, Length 1,441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf38-207ENST00000515640 NISCHQ9Y2I1 1504 aa34.64■■■■□ 3.14
C5orf38-207ENST00000515640 CCDC180Q9P1Z9 1646 aa30.22■■■□□ 2.43
C5orf38-207ENST00000515640 ABCC9O60706 1549 aa29.11■■■□□ 2.25
C5orf38-207ENST00000515640 ZCCHC6Q5VYS8 1495 aaKnown RBP29.06■■■□□ 2.24
C5orf38-207ENST00000515640 DCAF8L2P0C7V8 631 aa28.75■■■□□ 2.19
C5orf38-207ENST00000515640 DCAF1Q9Y4B6 1507 aa28.58■■■□□ 2.17
C5orf38-207ENST00000515640 SHROOM4Q9ULL8 1493 aa28.35■■■□□ 2.13
C5orf38-207ENST00000515640 MYO15BQ96JP2 1530 aa28.22■■■□□ 2.11
C5orf38-207ENST00000515640 NACADO15069 1562 aa28.13■■■□□ 2.09
C5orf38-207ENST00000515640 RB1CC1Q8TDY2 1594 aa27.92■■■□□ 2.06
C5orf38-207ENST00000515640 SCRIBQ14160 1630 aa27.86■■■□□ 2.05
C5orf38-207ENST00000515640 UNC13AQ9UPW8 1703 aa27.48■■□□□ 1.99
C5orf38-207ENST00000515640 DNAJC5BQ9UF47 199 aa27.4■■□□□ 1.98
C5orf38-207ENST00000515640 SUPT5HO00267 1087 aaKnown RBP27.27■■□□□ 1.96
C5orf38-207ENST00000515640 PABPN1Q86U42 306 aaKnown RBP eCLIP27.08■■□□□ 1.93
C5orf38-207ENST00000515640 BICRAQ9NZM4 1560 aa27.08■■□□□ 1.93
C5orf38-207ENST00000515640 CECR2Q9BXF3 1484 aa26.95■■□□□ 1.91
C5orf38-207ENST00000515640 RSF1Q96T23 1441 aaPredicted RBP26.86■■□□□ 1.89
C5orf38-207ENST00000515640 MROH2BQ7Z745 1585 aa26.79■■□□□ 1.88
C5orf38-207ENST00000515640 BAZ1AQ9NRL2 1556 aaPredicted RBP26.74■■□□□ 1.87
C5orf38-207ENST00000515640 SMARCA4P51532 1647 aa26.66■■□□□ 1.86
C5orf38-207ENST00000515640 WIZO95785 1651 aa26.63■■□□□ 1.85
C5orf38-207ENST00000515640 TOP2AP11388 1531 aaKnown RBP26.26■■□□□ 1.8
C5orf38-207ENST00000515640 PEG3Q9GZU2 1588 aa26.26■■□□□ 1.79
C5orf38-207ENST00000515640 EIF4G1Q04637 1599 aaKnown RBP26.26■■□□□ 1.79
C5orf38-207ENST00000515640 CC2D2AQ9P2K1 1620 aa26.26■■□□□ 1.79
C5orf38-207ENST00000515640 ATAD2BQ9ULI0 1458 aa26.2■■□□□ 1.78
C5orf38-207ENST00000515640 SMARCA2P51531 1590 aa26.17■■□□□ 1.78
C5orf38-207ENST00000515640 BAZ1BQ9UIG0 1483 aaKnown RBP26.06■■□□□ 1.76
C5orf38-207ENST00000515640 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
C5orf38-207ENST00000515640 CCDC88BA6NC98 1476 aa26.03■■□□□ 1.76
C5orf38-207ENST00000515640 NCAPD3P42695 1498 aa25.93■■□□□ 1.74
C5orf38-207ENST00000515640 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
C5orf38-207ENST00000515640 TRIM41Q8WV44 630 aa25.6■■□□□ 1.69
C5orf38-207ENST00000515640 ABCC8Q09428 1581 aa25.51■■□□□ 1.67
C5orf38-207ENST00000515640 PRDM2Q13029 1718 aa25.36■■□□□ 1.65
C5orf38-207ENST00000515640 CFTRP13569 1480 aa25.36■■□□□ 1.65
C5orf38-207ENST00000515640 CADPSQ9ULU8 1353 aa25.3■■□□□ 1.64
C5orf38-207ENST00000515640 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
C5orf38-207ENST00000515640 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
C5orf38-207ENST00000515640 FAM9AQ8IZU1 332 aaPredicted RBP25.2■■□□□ 1.63
C5orf38-207ENST00000515640 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.63
C5orf38-207ENST00000515640 NESP48681 1621 aa25.14■■□□□ 1.61
C5orf38-207ENST00000515640 ERCC6Q03468 1493 aa25.13■■□□□ 1.61
C5orf38-207ENST00000515640 LOC105371045A0A1W2PR82 267 aa25.12■■□□□ 1.61
C5orf38-207ENST00000515640 TOP2BQ02880 1626 aa25.1■■□□□ 1.61
C5orf38-207ENST00000515640 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
C5orf38-207ENST00000515640 BIVM-ERCC5R4GMW8 1640 aa25.09■■□□□ 1.61
C5orf38-207ENST00000515640 CUX2O14529 1486 aa25.06■■□□□ 1.6
C5orf38-207ENST00000515640 CUX1P39880 1505 aa25.05■■□□□ 1.6
C5orf38-207ENST00000515640 FANCD2Q9BXW9 1451 aa25.04■■□□□ 1.6
C5orf38-207ENST00000515640 SOGA1O94964 1423 aa25■■□□□ 1.59
C5orf38-207ENST00000515640 RUSC2Q8N2Y8 1516 aa24.94■■□□□ 1.58
C5orf38-207ENST00000515640 EHMT2Q96KQ7 1210 aa24.9■■□□□ 1.58
C5orf38-207ENST00000515640 EEA1Q15075 1411 aa24.89■■□□□ 1.57
C5orf38-207ENST00000515640 PDS5BQ9NTI5 1447 aa24.89■■□□□ 1.57
C5orf38-207ENST00000515640 KIF21AQ7Z4S6 1674 aa24.89■■□□□ 1.57
C5orf38-207ENST00000515640 CEP164Q9UPV0 1460 aa24.88■■□□□ 1.57
C5orf38-207ENST00000515640 CSRNP3Q8WYN3 585 aa24.82■■□□□ 1.56
C5orf38-207ENST00000515640 DNMBPQ6XZF7 1577 aa24.81■■□□□ 1.56
C5orf38-207ENST00000515640 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
C5orf38-207ENST00000515640 FGD5Q6ZNL6 1462 aa24.77■■□□□ 1.56
C5orf38-207ENST00000515640 URB2Q14146 1524 aaKnown RBP24.74■■□□□ 1.55
C5orf38-207ENST00000515640 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
C5orf38-207ENST00000515640 KIF27Q86VH2 1401 aa24.65■■□□□ 1.54
C5orf38-207ENST00000515640 POLA1P09884 1462 aaPredicted RBP24.63■■□□□ 1.53
C5orf38-207ENST00000515640 KIF21BO75037 1637 aa24.61■■□□□ 1.53
C5orf38-207ENST00000515640 RAD54L2Q9Y4B4 1467 aa24.6■■□□□ 1.53
C5orf38-207ENST00000515640 GOLGA3Q08378 1498 aa24.58■■□□□ 1.53
C5orf38-207ENST00000515640 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.53
C5orf38-207ENST00000515640 UBTFP17480 764 aaKnown RBP24.54■■□□□ 1.52
C5orf38-207ENST00000515640 ABCA10Q8WWZ4 1543 aa24.52■■□□□ 1.52
C5orf38-207ENST00000515640 TNIKQ9UKE5 1360 aa24.5■■□□□ 1.51
C5orf38-207ENST00000515640 WDR97A6NE52 1622 aa24.49■■□□□ 1.51
C5orf38-207ENST00000515640 RAPGEF2Q9Y4G8 1499 aa24.48■■□□□ 1.51
C5orf38-207ENST00000515640 PRXQ9BXM0 1461 aa24.46■■□□□ 1.51
C5orf38-207ENST00000515640 IGF1RP08069 1367 aa24.44■■□□□ 1.5
C5orf38-207ENST00000515640 WDR62O43379 1518 aa24.44■■□□□ 1.5
C5orf38-207ENST00000515640 ERICH3Q5RHP9 1530 aa24.42■■□□□ 1.5
C5orf38-207ENST00000515640 TARBP1Q13395 1621 aaKnown RBP24.42■■□□□ 1.5
C5orf38-207ENST00000515640 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
C5orf38-207ENST00000515640 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
C5orf38-207ENST00000515640 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
C5orf38-207ENST00000515640 CARMIL1Q5VZK9 1371 aa24.33■■□□□ 1.49
C5orf38-207ENST00000515640 GAPVD1Q14C86 1478 aa24.3■■□□□ 1.48
C5orf38-207ENST00000515640 CUL7Q14999 1698 aa24.27■■□□□ 1.48
C5orf38-207ENST00000515640 IFT140Q96RY7 1462 aa24.27■■□□□ 1.48
C5orf38-207ENST00000515640 PBRM1Q86U86 1689 aa24.24■■□□□ 1.47
C5orf38-207ENST00000515640 RANGAP1P46060 587 aaPredicted RBP24.21■■□□□ 1.47
C5orf38-207ENST00000515640 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.47
C5orf38-207ENST00000515640 CLIP1P30622 1438 aa24.19■■□□□ 1.46
C5orf38-207ENST00000515640 ZNF608Q9ULD9 1512 aaPredicted RBP24.18■■□□□ 1.46
C5orf38-207ENST00000515640 GRIN2BQ13224 1484 aa24.1■■□□□ 1.45
C5orf38-207ENST00000515640 EIF4G3O43432 1585 aaKnown RBP24.1■■□□□ 1.45
C5orf38-207ENST00000515640 CTTNBP2Q8WZ74 1663 aa24.07■■□□□ 1.44
C5orf38-207ENST00000515640 ADAMTS12P58397 1594 aa24.03■■□□□ 1.44
C5orf38-207ENST00000515640 FHAD1B1AJZ9 1412 aa24.02■■□□□ 1.44
C5orf38-207ENST00000515640 PPARGC1BQ86YN6 1023 aaKnown RBP24■■□□□ 1.43
C5orf38-207ENST00000515640 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
C5orf38-207ENST00000515640 ARAP1Q96P48 1450 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms