RNA–Protein interactions for RNA: ENST00000368770.3

LCE1E-201, Transcript of late cornified envelope 1E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LCE1E, Length 1,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE1E-201ENST00000368770 NISCHQ9Y2I1 1504 aa40.43■■■■■ 4.06
LCE1E-201ENST00000368770 ABCC9O60706 1549 aa36.6■■■■□ 3.45
LCE1E-201ENST00000368770 CCDC180Q9P1Z9 1646 aa36.52■■■■□ 3.44
LCE1E-201ENST00000368770 RB1CC1Q8TDY2 1594 aa34.83■■■■□ 3.17
LCE1E-201ENST00000368770 NACADO15069 1562 aa34.53■■■■□ 3.12
LCE1E-201ENST00000368770 DNAJC5BQ9UF47 199 aa34.51■■■■□ 3.12
LCE1E-201ENST00000368770 UNC13AQ9UPW8 1703 aa34.1■■■■□ 3.05
LCE1E-201ENST00000368770 MYO15BQ96JP2 1530 aa34.01■■■■□ 3.04
LCE1E-201ENST00000368770 DCAF8L2P0C7V8 631 aa33.97■■■■□ 3.03
LCE1E-201ENST00000368770 PABPN1Q86U42 306 aaKnown RBP eCLIP33.93■■■■□ 3.02
LCE1E-201ENST00000368770 BICRAQ9NZM4 1560 aa33.83■■■■□ 3.01
LCE1E-201ENST00000368770 ZCCHC6Q5VYS8 1495 aaKnown RBP33.5■■■□□ 2.95
LCE1E-201ENST00000368770 DCAF1Q9Y4B6 1507 aa33.46■■■□□ 2.95
LCE1E-201ENST00000368770 SHROOM4Q9ULL8 1493 aa33.43■■■□□ 2.94
LCE1E-201ENST00000368770 SCRIBQ14160 1630 aa33.14■■■□□ 2.9
LCE1E-201ENST00000368770 CC2D2AQ9P2K1 1620 aa33.13■■■□□ 2.89
LCE1E-201ENST00000368770 CECR2Q9BXF3 1484 aa33.04■■■□□ 2.88
LCE1E-201ENST00000368770 EIF4G1Q04637 1599 aaKnown RBP33.01■■■□□ 2.88
LCE1E-201ENST00000368770 DNAJC5Q9H3Z4 198 aa31.93■■■□□ 2.7
LCE1E-201ENST00000368770 NCAPD3P42695 1498 aa31.84■■■□□ 2.69
LCE1E-201ENST00000368770 CUX2O14529 1486 aa31.77■■■□□ 2.68
LCE1E-201ENST00000368770 ATAD2BQ9ULI0 1458 aa31.69■■■□□ 2.66
LCE1E-201ENST00000368770 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
LCE1E-201ENST00000368770 ERCC6Q03468 1493 aa31.64■■■□□ 2.66
LCE1E-201ENST00000368770 SMARCA4P51532 1647 aa31.64■■■□□ 2.65
LCE1E-201ENST00000368770 SMARCA2P51531 1590 aa31.63■■■□□ 2.65
LCE1E-201ENST00000368770 BAZ1AQ9NRL2 1556 aaPredicted RBP31.43■■■□□ 2.62
LCE1E-201ENST00000368770 PEG3Q9GZU2 1588 aa31.39■■■□□ 2.61
LCE1E-201ENST00000368770 NESP48681 1621 aa31.38■■■□□ 2.61
LCE1E-201ENST00000368770 BAZ1BQ9UIG0 1483 aaKnown RBP31.36■■■□□ 2.61
LCE1E-201ENST00000368770 THOC2Q8NI27 1593 aaKnown RBP31.25■■■□□ 2.59
LCE1E-201ENST00000368770 LAMC3Q9Y6N6 1575 aa31.22■■■□□ 2.59
LCE1E-201ENST00000368770 MROH2BQ7Z745 1585 aa31.13■■■□□ 2.57
LCE1E-201ENST00000368770 KIF21AQ7Z4S6 1674 aa31.06■■■□□ 2.56
LCE1E-201ENST00000368770 PDS5BQ9NTI5 1447 aa30.96■■■□□ 2.55
LCE1E-201ENST00000368770 CADPSQ9ULU8 1353 aa30.81■■■□□ 2.52
LCE1E-201ENST00000368770 WIZO95785 1651 aa30.75■■■□□ 2.51
LCE1E-201ENST00000368770 MRC2Q9UBG0 1479 aa30.75■■■□□ 2.51
LCE1E-201ENST00000368770 WDR62O43379 1518 aa30.73■■■□□ 2.51
LCE1E-201ENST00000368770 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
LCE1E-201ENST00000368770 FANCD2Q9BXW9 1451 aa30.49■■■□□ 2.47
LCE1E-201ENST00000368770 CFTRP13569 1480 aa30.45■■■□□ 2.47
LCE1E-201ENST00000368770 TOP2AP11388 1531 aaKnown RBP30.38■■■□□ 2.45
LCE1E-201ENST00000368770 RSF1Q96T23 1441 aaPredicted RBP30.36■■■□□ 2.45
LCE1E-201ENST00000368770 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
LCE1E-201ENST00000368770 URB2Q14146 1524 aaKnown RBP30.27■■■□□ 2.44
LCE1E-201ENST00000368770 PRDM2Q13029 1718 aa30.25■■■□□ 2.43
LCE1E-201ENST00000368770 OSCARQ8IYS5 282 aa30.11■■■□□ 2.41
LCE1E-201ENST00000368770 IFT140Q96RY7 1462 aa29.97■■■□□ 2.39
LCE1E-201ENST00000368770 CCDC88BA6NC98 1476 aa29.96■■■□□ 2.39
LCE1E-201ENST00000368770 ZNF608Q9ULD9 1512 aaPredicted RBP29.91■■■□□ 2.38
LCE1E-201ENST00000368770 TOPBP1Q92547 1522 aa29.9■■■□□ 2.38
LCE1E-201ENST00000368770 RIMBP3CA6NJZ7 1639 aa29.89■■■□□ 2.38
LCE1E-201ENST00000368770 RIMBP3BA6NNM3 1639 aa29.89■■■□□ 2.38
LCE1E-201ENST00000368770 RIMBP3Q9UFD9 1639 aa29.89■■■□□ 2.38
LCE1E-201ENST00000368770 ABCC8Q09428 1581 aa29.82■■■□□ 2.36
LCE1E-201ENST00000368770 EIF4G3O43432 1585 aaKnown RBP29.81■■■□□ 2.36
LCE1E-201ENST00000368770 DNMBPQ6XZF7 1577 aa29.8■■■□□ 2.36
LCE1E-201ENST00000368770 ARHGEF11O15085 1522 aa29.76■■■□□ 2.35
LCE1E-201ENST00000368770 TARBP1Q13395 1621 aaKnown RBP29.7■■■□□ 2.34
LCE1E-201ENST00000368770 CHD1O14646 1710 aa29.65■■■□□ 2.34
LCE1E-201ENST00000368770 POLA1P09884 1462 aaPredicted RBP29.57■■■□□ 2.32
LCE1E-201ENST00000368770 AQRO60306 1485 aaKnown RBP eCLIP29.56■■■□□ 2.32
LCE1E-201ENST00000368770 WDR97A6NE52 1622 aa29.45■■■□□ 2.3
LCE1E-201ENST00000368770 ARAP1Q96P48 1450 aa29.44■■■□□ 2.3
LCE1E-201ENST00000368770 RAD54L2Q9Y4B4 1467 aa29.41■■■□□ 2.3
LCE1E-201ENST00000368770 CYB5RLQ6IPT4 315 aa29.38■■■□□ 2.29
LCE1E-201ENST00000368770 SOGA1O94964 1423 aa29.36■■■□□ 2.29
LCE1E-201ENST00000368770 FGD5Q6ZNL6 1462 aa29.33■■■□□ 2.29
LCE1E-201ENST00000368770 CLASP1Q7Z460 1538 aa29.31■■■□□ 2.28
LCE1E-201ENST00000368770 SNAPC4Q5SXM2 1469 aa29.31■■■□□ 2.28
LCE1E-201ENST00000368770 TDRD9Q8NDG6 1382 aaKnown RBP29.31■■■□□ 2.28
LCE1E-201ENST00000368770 FBLN2P98095 1184 aa29.31■■■□□ 2.28
LCE1E-201ENST00000368770 CUX1P39880 1505 aa29.28■■■□□ 2.28
LCE1E-201ENST00000368770 MAGI1Q96QZ7 1491 aaPredicted RBP29.27■■■□□ 2.28
LCE1E-201ENST00000368770 SYNJ1O43426 1573 aa29.24■■■□□ 2.27
LCE1E-201ENST00000368770 GRIN2BQ13224 1484 aa29.2■■■□□ 2.26
LCE1E-201ENST00000368770 SYNJ2O15056 1496 aa29.15■■■□□ 2.26
LCE1E-201ENST00000368770 PBRM1Q86U86 1689 aa29.15■■■□□ 2.26
LCE1E-201ENST00000368770 TRHP20396 242 aaPredicted RBP29.13■■■□□ 2.25
LCE1E-201ENST00000368770 CHMP7Q8WUX9 453 aaPredicted RBP29.1■■■□□ 2.25
LCE1E-201ENST00000368770 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
LCE1E-201ENST00000368770 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
LCE1E-201ENST00000368770 ABCA10Q8WWZ4 1543 aa29.02■■■□□ 2.24
LCE1E-201ENST00000368770 GRIN2AQ12879 1464 aa28.85■■■□□ 2.21
LCE1E-201ENST00000368770 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
LCE1E-201ENST00000368770 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
LCE1E-201ENST00000368770 WRNQ14191 1432 aaPredicted RBP eCLIP28.78■■■□□ 2.2
LCE1E-201ENST00000368770 NUP160Q12769 1436 aa28.77■■■□□ 2.2
LCE1E-201ENST00000368770 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
LCE1E-201ENST00000368770 CEP170Q5SW79 1584 aa28.77■■■□□ 2.2
LCE1E-201ENST00000368770 ERCC6L2Q5T890 1561 aa28.76■■■□□ 2.19
LCE1E-201ENST00000368770 SHROOM2Q13796 1616 aa28.73■■■□□ 2.19
LCE1E-201ENST00000368770 FHAD1B1AJZ9 1412 aa28.67■■■□□ 2.18
LCE1E-201ENST00000368770 ERICH3Q5RHP9 1530 aa28.66■■■□□ 2.18
LCE1E-201ENST00000368770 SUPT5HO00267 1087 aaKnown RBP28.62■■■□□ 2.17
LCE1E-201ENST00000368770 AEBP2Q6ZN18 517 aaPredicted RBP28.49■■■□□ 2.15
LCE1E-201ENST00000368770 KIF13AQ9H1H9 1805 aa28.48■■■□□ 2.15
LCE1E-201ENST00000368770 RUSC2Q8N2Y8 1516 aa28.46■■■□□ 2.15
LCE1E-201ENST00000368770 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms