RNA–Protein interactions for RNA: ENST00000291576.11

PWP2-201, Transcript of PWP2, small subunit processome component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PWP2, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PWP2-201ENST00000291576 NISCHQ9Y2I1 1504 aa29.44■■■□□ 2.3
PWP2-201ENST00000291576 SHROOM4Q9ULL8 1493 aa26.72■■□□□ 1.87
PWP2-201ENST00000291576 SUPT5HO00267 1087 aaKnown RBP26.49■■□□□ 1.83
PWP2-201ENST00000291576 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
PWP2-201ENST00000291576 PCGF6Q9BYE7 350 aa25.69■■□□□ 1.7
PWP2-201ENST00000291576 PPARGC1BQ86YN6 1023 aaKnown RBP25.59■■□□□ 1.69
PWP2-201ENST00000291576 HRCP23327 699 aa25.57■■□□□ 1.68
PWP2-201ENST00000291576 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
PWP2-201ENST00000291576 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
PWP2-201ENST00000291576 LOC105371045A0A1W2PR82 267 aa25.23■■□□□ 1.63
PWP2-201ENST00000291576 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
PWP2-201ENST00000291576 EHMT2Q96KQ7 1210 aa24.88■■□□□ 1.57
PWP2-201ENST00000291576 FAM9AQ8IZU1 332 aaPredicted RBP24.65■■□□□ 1.54
PWP2-201ENST00000291576 TRIM26Q12899 539 aaPredicted RBP24.55■■□□□ 1.52
PWP2-201ENST00000291576 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
PWP2-201ENST00000291576 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
PWP2-201ENST00000291576 CCDC180Q9P1Z9 1646 aa24.18■■□□□ 1.46
PWP2-201ENST00000291576 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.46
PWP2-201ENST00000291576 TTBK1Q5TCY1 1321 aaPredicted RBP24.11■■□□□ 1.45
PWP2-201ENST00000291576 ZEB1P37275 1124 aaPredicted RBP23.99■■□□□ 1.43
PWP2-201ENST00000291576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
PWP2-201ENST00000291576 CCER1Q8TC90 406 aaPredicted RBP23.81■■□□□ 1.4
PWP2-201ENST00000291576 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
PWP2-201ENST00000291576 NEUROD1Q13562 356 aa23.7■■□□□ 1.38
PWP2-201ENST00000291576 PELP1Q8IZL8 1130 aaKnown RBP23.68■■□□□ 1.38
PWP2-201ENST00000291576 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
PWP2-201ENST00000291576 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
PWP2-201ENST00000291576 GTF3C3Q9Y5Q9 886 aa23.57■■□□□ 1.36
PWP2-201ENST00000291576 ACIN1Q9UKV3 1341 aaKnown RBP23.55■■□□□ 1.36
PWP2-201ENST00000291576 ABCC9O60706 1549 aa23.52■■□□□ 1.36
PWP2-201ENST00000291576 DIEXFQ68CQ4 756 aaKnown RBP23.51■■□□□ 1.35
PWP2-201ENST00000291576 YTHDC1Q96MU7 727 aaKnown RBP23.51■■□□□ 1.35
PWP2-201ENST00000291576 CECR2Q9BXF3 1484 aa23.39■■□□□ 1.33
PWP2-201ENST00000291576 CENPBP07199 599 aaPredicted RBP23.3■■□□□ 1.32
PWP2-201ENST00000291576 RANGAP1P46060 587 aaPredicted RBP23.21■■□□□ 1.31
PWP2-201ENST00000291576 UBTFP17480 764 aaKnown RBP23.21■■□□□ 1.31
PWP2-201ENST00000291576 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
PWP2-201ENST00000291576 HNRNPUL2Q1KMD3 747 aaKnown RBP23.18■■□□□ 1.3
PWP2-201ENST00000291576 WIZO95785 1651 aa23.06■■□□□ 1.28
PWP2-201ENST00000291576 MIER1Q8N108 512 aa23.03■■□□□ 1.28
PWP2-201ENST00000291576 ZNF316A6NFI3 1004 aaPredicted RBP23.02■■□□□ 1.28
PWP2-201ENST00000291576 ABCC8Q09428 1581 aa22.98■■□□□ 1.27
PWP2-201ENST00000291576 CCDC88BA6NC98 1476 aa22.96■■□□□ 1.27
PWP2-201ENST00000291576 SOGA1O94964 1423 aa22.95■■□□□ 1.26
PWP2-201ENST00000291576 CEP162Q5TB80 1403 aa22.93■■□□□ 1.26
PWP2-201ENST00000291576 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
PWP2-201ENST00000291576 RUSC2Q8N2Y8 1516 aa22.85■■□□□ 1.25
PWP2-201ENST00000291576 PABPN1Q86U42 306 aaKnown RBP eCLIP22.68■■□□□ 1.22
PWP2-201ENST00000291576 APLP2Q06481 763 aa22.67■■□□□ 1.22
PWP2-201ENST00000291576 TNIKQ9UKE5 1360 aa22.65■■□□□ 1.22
PWP2-201ENST00000291576 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
PWP2-201ENST00000291576 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
PWP2-201ENST00000291576 ITGAEP38570 1179 aa22.55■■□□□ 1.2
PWP2-201ENST00000291576 NACADO15069 1562 aa22.51■■□□□ 1.19
PWP2-201ENST00000291576 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
PWP2-201ENST00000291576 MYT1Q01538 1121 aa22.45■■□□□ 1.18
PWP2-201ENST00000291576 BCANQ96GW7 911 aa22.43■■□□□ 1.18
PWP2-201ENST00000291576 CLIP1P30622 1438 aa22.42■■□□□ 1.18
PWP2-201ENST00000291576 GOLGA3Q08378 1498 aa22.41■■□□□ 1.18
PWP2-201ENST00000291576 KCNH8Q96L42 1107 aa22.39■■□□□ 1.17
PWP2-201ENST00000291576 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
PWP2-201ENST00000291576 SUPT16HQ9Y5B9 1047 aaKnown RBP22.37■■□□□ 1.17
PWP2-201ENST00000291576 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
PWP2-201ENST00000291576 KANK4Q5T7N3 995 aaPredicted RBP22.3■■□□□ 1.16
PWP2-201ENST00000291576 SMARCA4P51532 1647 aa22.25■■□□□ 1.15
PWP2-201ENST00000291576 EEA1Q15075 1411 aa22.24■■□□□ 1.15
PWP2-201ENST00000291576 RAPGEF2Q9Y4G8 1499 aa22.24■■□□□ 1.15
PWP2-201ENST00000291576 HIRIP3Q9BW71 556 aaPredicted RBP22.21■■□□□ 1.15
PWP2-201ENST00000291576 VPS8Q8N3P4 1428 aa22.2■■□□□ 1.14
PWP2-201ENST00000291576 CEP164Q9UPV0 1460 aa22.18■■□□□ 1.14
PWP2-201ENST00000291576 TSHZ2Q9NRE2 1034 aa22.16■■□□□ 1.14
PWP2-201ENST00000291576 DHX57Q6P158 1386 aaKnown RBP22.15■■□□□ 1.14
PWP2-201ENST00000291576 SYNJ1O43426 1573 aa22.11■■□□□ 1.13
PWP2-201ENST00000291576 DDX10Q13206 875 aaKnown RBP22.1■■□□□ 1.13
PWP2-201ENST00000291576 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.12
PWP2-201ENST00000291576 FKBP8Q14318 412 aa22.07■■□□□ 1.12
PWP2-201ENST00000291576 TRIM52Q96A61 297 aa22.02■■□□□ 1.12
PWP2-201ENST00000291576 SIN3AQ96ST3 1273 aa22.02■■□□□ 1.11
PWP2-201ENST00000291576 KIF21BO75037 1637 aa22.01■■□□□ 1.11
PWP2-201ENST00000291576 FAM50AQ14320 339 aaKnown RBP21.94■■□□□ 1.1
PWP2-201ENST00000291576 P3H3Q8IVL6 736 aa21.94■■□□□ 1.1
PWP2-201ENST00000291576 ANP32EQ9BTT0 268 aa21.9■■□□□ 1.1
PWP2-201ENST00000291576 ARAP1Q96P48 1450 aa21.83■■□□□ 1.08
PWP2-201ENST00000291576 IRX6P78412 446 aaPredicted RBP21.82■■□□□ 1.08
PWP2-201ENST00000291576 CLSPNQ9HAW4 1339 aa21.82■■□□□ 1.08
PWP2-201ENST00000291576 CCNB3Q8WWL7 1395 aa21.81■■□□□ 1.08
PWP2-201ENST00000291576 RAB3GAP2Q9H2M9 1393 aa21.8■■□□□ 1.08
PWP2-201ENST00000291576 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
PWP2-201ENST00000291576 BAZ1BQ9UIG0 1483 aaKnown RBP21.79■■□□□ 1.08
PWP2-201ENST00000291576 NEFLP07196 543 aa21.78■■□□□ 1.08
PWP2-201ENST00000291576 ATAD2BQ9ULI0 1458 aa21.73■■□□□ 1.07
PWP2-201ENST00000291576 RBM19Q9Y4C8 960 aaKnown RBP21.72■■□□□ 1.07
PWP2-201ENST00000291576 BCL11AQ9H165 835 aa21.68■■□□□ 1.06
PWP2-201ENST00000291576 ANP32CO43423 234 aa21.65■■□□□ 1.06
PWP2-201ENST00000291576 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.05
PWP2-201ENST00000291576 CNGB1Q14028 1251 aaPredicted RBP21.64■■□□□ 1.05
PWP2-201ENST00000291576 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
PWP2-201ENST00000291576 PRXQ9BXM0 1461 aa21.61■■□□□ 1.05
PWP2-201ENST00000291576 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
PWP2-201ENST00000291576 PPP1R15AO75807 674 aaPredicted RBP21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms