RNA–Protein interactions for RNA: ENST00000540079.6

KIFC3-205, Transcript of kinesin family member C3, humanhuman

TSL 2 BASIC

Gene KIFC3, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-205ENST00000540079 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
KIFC3-205ENST00000540079 CCDC180Q9P1Z9 1646 aa27.42■■□□□ 1.98
KIFC3-205ENST00000540079 SHROOM4Q9ULL8 1493 aa27.38■■□□□ 1.97
KIFC3-205ENST00000540079 DCAF8L2P0C7V8 631 aa27.23■■□□□ 1.95
KIFC3-205ENST00000540079 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
KIFC3-205ENST00000540079 SUPT5HO00267 1087 aaKnown RBP26.66■■□□□ 1.86
KIFC3-205ENST00000540079 HRCP23327 699 aa26.3■■□□□ 1.8
KIFC3-205ENST00000540079 DCAF1Q9Y4B6 1507 aa26.26■■□□□ 1.79
KIFC3-205ENST00000540079 PPARGC1BQ86YN6 1023 aaKnown RBP26.23■■□□□ 1.79
KIFC3-205ENST00000540079 ABCC9O60706 1549 aa26.11■■□□□ 1.77
KIFC3-205ENST00000540079 PCGF6Q9BYE7 350 aa26.08■■□□□ 1.77
KIFC3-205ENST00000540079 SCRIBQ14160 1630 aa25.83■■□□□ 1.73
KIFC3-205ENST00000540079 MYO15BQ96JP2 1530 aa25.75■■□□□ 1.71
KIFC3-205ENST00000540079 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
KIFC3-205ENST00000540079 NACADO15069 1562 aa25.55■■□□□ 1.68
KIFC3-205ENST00000540079 RSF1Q96T23 1441 aaPredicted RBP25.33■■□□□ 1.65
KIFC3-205ENST00000540079 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
KIFC3-205ENST00000540079 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
KIFC3-205ENST00000540079 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
KIFC3-205ENST00000540079 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
KIFC3-205ENST00000540079 PELP1Q8IZL8 1130 aaKnown RBP25.05■■□□□ 1.6
KIFC3-205ENST00000540079 MROH2BQ7Z745 1585 aa25.02■■□□□ 1.6
KIFC3-205ENST00000540079 PABPN1Q86U42 306 aaKnown RBP eCLIP24.98■■□□□ 1.59
KIFC3-205ENST00000540079 TRIM26Q12899 539 aaPredicted RBP24.87■■□□□ 1.57
KIFC3-205ENST00000540079 WIZO95785 1651 aa24.86■■□□□ 1.57
KIFC3-205ENST00000540079 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
KIFC3-205ENST00000540079 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
KIFC3-205ENST00000540079 BAZ1AQ9NRL2 1556 aaPredicted RBP24.73■■□□□ 1.55
KIFC3-205ENST00000540079 FAM9AQ8IZU1 332 aaPredicted RBP24.7■■□□□ 1.54
KIFC3-205ENST00000540079 EHMT2Q96KQ7 1210 aa24.63■■□□□ 1.53
KIFC3-205ENST00000540079 ZEB1P37275 1124 aaPredicted RBP24.59■■□□□ 1.53
KIFC3-205ENST00000540079 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
KIFC3-205ENST00000540079 BICRAQ9NZM4 1560 aa24.57■■□□□ 1.52
KIFC3-205ENST00000540079 NEUROD1Q13562 356 aa24.42■■□□□ 1.5
KIFC3-205ENST00000540079 TOP2AP11388 1531 aaKnown RBP24.4■■□□□ 1.5
KIFC3-205ENST00000540079 CCDC88BA6NC98 1476 aa24.37■■□□□ 1.49
KIFC3-205ENST00000540079 ACIN1Q9UKV3 1341 aaKnown RBP24.3■■□□□ 1.48
KIFC3-205ENST00000540079 GTF3C3Q9Y5Q9 886 aa24.3■■□□□ 1.48
KIFC3-205ENST00000540079 SMARCA2P51531 1590 aa24.27■■□□□ 1.48
KIFC3-205ENST00000540079 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
KIFC3-205ENST00000540079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.19■■□□□ 1.46
KIFC3-205ENST00000540079 EIF4G1Q04637 1599 aaKnown RBP24.14■■□□□ 1.46
KIFC3-205ENST00000540079 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
KIFC3-205ENST00000540079 BAZ1BQ9UIG0 1483 aaKnown RBP24.06■■□□□ 1.44
KIFC3-205ENST00000540079 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
KIFC3-205ENST00000540079 CCER1Q8TC90 406 aaPredicted RBP24.01■■□□□ 1.43
KIFC3-205ENST00000540079 TTBK1Q5TCY1 1321 aaPredicted RBP23.98■■□□□ 1.43
KIFC3-205ENST00000540079 DIEXFQ68CQ4 756 aaKnown RBP23.97■■□□□ 1.43
KIFC3-205ENST00000540079 YTHDC1Q96MU7 727 aaKnown RBP23.94■■□□□ 1.42
KIFC3-205ENST00000540079 CENPBP07199 599 aaPredicted RBP23.91■■□□□ 1.42
KIFC3-205ENST00000540079 MYT1Q01538 1121 aa23.91■■□□□ 1.42
KIFC3-205ENST00000540079 SOGA1O94964 1423 aa23.91■■□□□ 1.42
KIFC3-205ENST00000540079 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
KIFC3-205ENST00000540079 RUSC2Q8N2Y8 1516 aa23.81■■□□□ 1.4
KIFC3-205ENST00000540079 CSRNP3Q8WYN3 585 aa23.76■■□□□ 1.39
KIFC3-205ENST00000540079 UBTFP17480 764 aaKnown RBP23.75■■□□□ 1.39
KIFC3-205ENST00000540079 NCAPD3P42695 1498 aa23.69■■□□□ 1.38
KIFC3-205ENST00000540079 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
KIFC3-205ENST00000540079 HMGXB3Q12766 1538 aa23.58■■□□□ 1.37
KIFC3-205ENST00000540079 EEA1Q15075 1411 aa23.56■■□□□ 1.36
KIFC3-205ENST00000540079 CEP162Q5TB80 1403 aa23.54■■□□□ 1.36
KIFC3-205ENST00000540079 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
KIFC3-205ENST00000540079 TNIKQ9UKE5 1360 aa23.49■■□□□ 1.35
KIFC3-205ENST00000540079 GOLGA3Q08378 1498 aa23.44■■□□□ 1.34
KIFC3-205ENST00000540079 MIER1Q8N108 512 aa23.44■■□□□ 1.34
KIFC3-205ENST00000540079 CC2D2AQ9P2K1 1620 aa23.39■■□□□ 1.33
KIFC3-205ENST00000540079 CFTRP13569 1480 aa23.38■■□□□ 1.33
KIFC3-205ENST00000540079 TOP2BQ02880 1626 aa23.37■■□□□ 1.33
KIFC3-205ENST00000540079 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
KIFC3-205ENST00000540079 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
KIFC3-205ENST00000540079 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
KIFC3-205ENST00000540079 CUX1P39880 1505 aa23.31■■□□□ 1.32
KIFC3-205ENST00000540079 CADPSQ9ULU8 1353 aa23.28■■□□□ 1.32
KIFC3-205ENST00000540079 BIVM-ERCC5R4GMW8 1640 aa23.24■■□□□ 1.31
KIFC3-205ENST00000540079 CLIP1P30622 1438 aa23.23■■□□□ 1.31
KIFC3-205ENST00000540079 KIF21BO75037 1637 aa23.22■■□□□ 1.31
KIFC3-205ENST00000540079 KIF27Q86VH2 1401 aa23.15■■□□□ 1.3
KIFC3-205ENST00000540079 DNAJC5BQ9UF47 199 aa23.14■■□□□ 1.29
KIFC3-205ENST00000540079 HNRNPUL2Q1KMD3 747 aaKnown RBP23.12■■□□□ 1.29
KIFC3-205ENST00000540079 APLP2Q06481 763 aa23.1■■□□□ 1.29
KIFC3-205ENST00000540079 NESP48681 1621 aa23.09■■□□□ 1.29
KIFC3-205ENST00000540079 CUX2O14529 1486 aa23.06■■□□□ 1.28
KIFC3-205ENST00000540079 PRXQ9BXM0 1461 aa23.06■■□□□ 1.28
KIFC3-205ENST00000540079 FANCD2Q9BXW9 1451 aa23.05■■□□□ 1.28
KIFC3-205ENST00000540079 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
KIFC3-205ENST00000540079 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
KIFC3-205ENST00000540079 SUPT16HQ9Y5B9 1047 aaKnown RBP23■■□□□ 1.27
KIFC3-205ENST00000540079 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
KIFC3-205ENST00000540079 BCL11AQ9H165 835 aa22.98■■□□□ 1.27
KIFC3-205ENST00000540079 IGF1RP08069 1367 aa22.95■■□□□ 1.26
KIFC3-205ENST00000540079 ERICH3Q5RHP9 1530 aa22.94■■□□□ 1.26
KIFC3-205ENST00000540079 TSHZ2Q9NRE2 1034 aa22.92■■□□□ 1.26
KIFC3-205ENST00000540079 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
KIFC3-205ENST00000540079 BCANQ96GW7 911 aa22.87■■□□□ 1.25
KIFC3-205ENST00000540079 ANP32EQ9BTT0 268 aa22.87■■□□□ 1.25
KIFC3-205ENST00000540079 CARMIL1Q5VZK9 1371 aa22.87■■□□□ 1.25
KIFC3-205ENST00000540079 ARAP1Q96P48 1450 aa22.83■■□□□ 1.25
KIFC3-205ENST00000540079 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
KIFC3-205ENST00000540079 TOPBP1Q92547 1522 aa22.81■■□□□ 1.24
KIFC3-205ENST00000540079 KANK4Q5T7N3 995 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms