RNA–Protein interactions for RNA: ENST00000403999.7

NF2-209, Transcript of neurofibromin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF2, Length 2,999 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF2-209ENST00000403999 NISCHQ9Y2I1 1504 aa31.36■■■□□ 2.61
NF2-209ENST00000403999 SHROOM4Q9ULL8 1493 aa26.87■■□□□ 1.89
NF2-209ENST00000403999 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
NF2-209ENST00000403999 CCDC180Q9P1Z9 1646 aa26.55■■□□□ 1.84
NF2-209ENST00000403999 SUPT5HO00267 1087 aaKnown RBP26.43■■□□□ 1.82
NF2-209ENST00000403999 DCAF8L2P0C7V8 631 aa25.98■■□□□ 1.75
NF2-209ENST00000403999 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
NF2-209ENST00000403999 MYO15BQ96JP2 1530 aa25.72■■□□□ 1.71
NF2-209ENST00000403999 DCAF1Q9Y4B6 1507 aa25.71■■□□□ 1.71
NF2-209ENST00000403999 HRCP23327 699 aa25.64■■□□□ 1.69
NF2-209ENST00000403999 PELP1Q8IZL8 1130 aaKnown RBP25.61■■□□□ 1.69
NF2-209ENST00000403999 PCGF6Q9BYE7 350 aa25.13■■□□□ 1.61
NF2-209ENST00000403999 PPARGC1BQ86YN6 1023 aaKnown RBP25.09■■□□□ 1.61
NF2-209ENST00000403999 ABCC9O60706 1549 aa25.08■■□□□ 1.61
NF2-209ENST00000403999 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
NF2-209ENST00000403999 SCRIBQ14160 1630 aa24.95■■□□□ 1.58
NF2-209ENST00000403999 RSF1Q96T23 1441 aaPredicted RBP24.89■■□□□ 1.58
NF2-209ENST00000403999 MYT1Q01538 1121 aa24.78■■□□□ 1.56
NF2-209ENST00000403999 RB1CC1Q8TDY2 1594 aa24.65■■□□□ 1.54
NF2-209ENST00000403999 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
NF2-209ENST00000403999 SCAF1Q9H7N4 1312 aaKnown RBP24.6■■□□□ 1.53
NF2-209ENST00000403999 TRIM41Q8WV44 630 aa24.6■■□□□ 1.53
NF2-209ENST00000403999 NACADO15069 1562 aa24.53■■□□□ 1.52
NF2-209ENST00000403999 CECR2Q9BXF3 1484 aa24.47■■□□□ 1.51
NF2-209ENST00000403999 FAM9AQ8IZU1 332 aaPredicted RBP24.42■■□□□ 1.5
NF2-209ENST00000403999 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
NF2-209ENST00000403999 WIZO95785 1651 aa24.27■■□□□ 1.48
NF2-209ENST00000403999 EHMT2Q96KQ7 1210 aa24.21■■□□□ 1.47
NF2-209ENST00000403999 ZEB1P37275 1124 aaPredicted RBP24.12■■□□□ 1.45
NF2-209ENST00000403999 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
NF2-209ENST00000403999 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
NF2-209ENST00000403999 TOP2AP11388 1531 aaKnown RBP23.88■■□□□ 1.41
NF2-209ENST00000403999 SMARCA4P51532 1647 aa23.84■■□□□ 1.41
NF2-209ENST00000403999 CCDC88BA6NC98 1476 aa23.8■■□□□ 1.4
NF2-209ENST00000403999 ACIN1Q9UKV3 1341 aaKnown RBP23.8■■□□□ 1.4
NF2-209ENST00000403999 ABCC8Q09428 1581 aa23.79■■□□□ 1.4
NF2-209ENST00000403999 SMARCA2P51531 1590 aa23.76■■□□□ 1.39
NF2-209ENST00000403999 UNC13AQ9UPW8 1703 aa23.75■■□□□ 1.39
NF2-209ENST00000403999 NEUROD1Q13562 356 aa23.7■■□□□ 1.39
NF2-209ENST00000403999 GTF3C3Q9Y5Q9 886 aa23.64■■□□□ 1.37
NF2-209ENST00000403999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.61■■□□□ 1.37
NF2-209ENST00000403999 SOGA1O94964 1423 aa23.61■■□□□ 1.37
NF2-209ENST00000403999 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.37
NF2-209ENST00000403999 CEP162Q5TB80 1403 aa23.57■■□□□ 1.36
NF2-209ENST00000403999 CCER1Q8TC90 406 aaPredicted RBP23.55■■□□□ 1.36
NF2-209ENST00000403999 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
NF2-209ENST00000403999 RUSC2Q8N2Y8 1516 aa23.49■■□□□ 1.35
NF2-209ENST00000403999 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
NF2-209ENST00000403999 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
NF2-209ENST00000403999 EEA1Q15075 1411 aa23.49■■□□□ 1.35
NF2-209ENST00000403999 TTBK1Q5TCY1 1321 aaPredicted RBP23.47■■□□□ 1.35
NF2-209ENST00000403999 BICRAQ9NZM4 1560 aa23.46■■□□□ 1.35
NF2-209ENST00000403999 CENPBP07199 599 aaPredicted RBP23.41■■□□□ 1.34
NF2-209ENST00000403999 UBTFP17480 764 aaKnown RBP23.41■■□□□ 1.34
NF2-209ENST00000403999 PEG3Q9GZU2 1588 aa23.37■■□□□ 1.33
NF2-209ENST00000403999 GOLGA3Q08378 1498 aa23.35■■□□□ 1.33
NF2-209ENST00000403999 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
NF2-209ENST00000403999 ATAD2BQ9ULI0 1458 aa23.21■■□□□ 1.31
NF2-209ENST00000403999 CEP164Q9UPV0 1460 aa23.19■■□□□ 1.3
NF2-209ENST00000403999 DIEXFQ68CQ4 756 aaKnown RBP23.17■■□□□ 1.3
NF2-209ENST00000403999 KIF21BO75037 1637 aa23.17■■□□□ 1.3
NF2-209ENST00000403999 BCL11AQ9H165 835 aa23.16■■□□□ 1.3
NF2-209ENST00000403999 BAZ1BQ9UIG0 1483 aaKnown RBP23.14■■□□□ 1.3
NF2-209ENST00000403999 CLIP1P30622 1438 aa23.1■■□□□ 1.29
NF2-209ENST00000403999 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.28
NF2-209ENST00000403999 VPS8Q8N3P4 1428 aa23.02■■□□□ 1.27
NF2-209ENST00000403999 HNRNPUL2Q1KMD3 747 aaKnown RBP22.99■■□□□ 1.27
NF2-209ENST00000403999 ZNF316A6NFI3 1004 aaPredicted RBP22.96■■□□□ 1.27
NF2-209ENST00000403999 TOP2BQ02880 1626 aa22.94■■□□□ 1.26
NF2-209ENST00000403999 RANGAP1P46060 587 aaPredicted RBP22.91■■□□□ 1.26
NF2-209ENST00000403999 APLP2Q06481 763 aa22.9■■□□□ 1.26
NF2-209ENST00000403999 BIVM-ERCC5R4GMW8 1640 aa22.84■■□□□ 1.25
NF2-209ENST00000403999 YTHDC1Q96MU7 727 aaKnown RBP22.8■■□□□ 1.24
NF2-209ENST00000403999 PRXQ9BXM0 1461 aa22.78■■□□□ 1.24
NF2-209ENST00000403999 ANP32EQ9BTT0 268 aa22.77■■□□□ 1.24
NF2-209ENST00000403999 ERICH3Q5RHP9 1530 aa22.76■■□□□ 1.23
NF2-209ENST00000403999 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
NF2-209ENST00000403999 ARAP1Q96P48 1450 aa22.71■■□□□ 1.23
NF2-209ENST00000403999 HMGXB3Q12766 1538 aa22.71■■□□□ 1.23
NF2-209ENST00000403999 CUX1P39880 1505 aa22.7■■□□□ 1.22
NF2-209ENST00000403999 MIER1Q8N108 512 aa22.67■■□□□ 1.22
NF2-209ENST00000403999 PRKCSHP14314 528 aaPredicted RBP22.66■■□□□ 1.22
NF2-209ENST00000403999 KANK4Q5T7N3 995 aaPredicted RBP22.63■■□□□ 1.21
NF2-209ENST00000403999 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
NF2-209ENST00000403999 CFTRP13569 1480 aa22.59■■□□□ 1.21
NF2-209ENST00000403999 DHX57Q6P158 1386 aaKnown RBP22.57■■□□□ 1.2
NF2-209ENST00000403999 CLSPNQ9HAW4 1339 aa22.55■■□□□ 1.2
NF2-209ENST00000403999 RRBP1Q9P2E9 1410 aaKnown RBP22.51■■□□□ 1.19
NF2-209ENST00000403999 ARHGAP35Q9NRY4 1499 aa22.49■■□□□ 1.19
NF2-209ENST00000403999 TSHZ2Q9NRE2 1034 aa22.43■■□□□ 1.18
NF2-209ENST00000403999 CCNB3Q8WWL7 1395 aa22.41■■□□□ 1.18
NF2-209ENST00000403999 CUX2O14529 1486 aa22.39■■□□□ 1.17
NF2-209ENST00000403999 IGF1RP08069 1367 aa22.39■■□□□ 1.17
NF2-209ENST00000403999 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
NF2-209ENST00000403999 SUPT16HQ9Y5B9 1047 aaKnown RBP22.36■■□□□ 1.17
NF2-209ENST00000403999 ITGAEP38570 1179 aa22.32■■□□□ 1.16
NF2-209ENST00000403999 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
NF2-209ENST00000403999 CARMIL1Q5VZK9 1371 aa22.29■■□□□ 1.16
NF2-209ENST00000403999 FGD5Q6ZNL6 1462 aa22.27■■□□□ 1.16
NF2-209ENST00000403999 TIAM1Q13009 1591 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms