RNA–Protein interactions for RNA: ENST00000523291.5

ERGIC1-212, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 2 BASIC

Gene ERGIC1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-212ENST00000523291 NISCHQ9Y2I1 1504 aa39.86■■■■□ 3.97
ERGIC1-212ENST00000523291 CCDC180Q9P1Z9 1646 aa35.72■■■■□ 3.31
ERGIC1-212ENST00000523291 ABCC9O60706 1549 aa35.42■■■■□ 3.26
ERGIC1-212ENST00000523291 RB1CC1Q8TDY2 1594 aa33.81■■■■□ 3
ERGIC1-212ENST00000523291 NACADO15069 1562 aa33.63■■■□□ 2.97
ERGIC1-212ENST00000523291 DCAF8L2P0C7V8 631 aa33.44■■■□□ 2.94
ERGIC1-212ENST00000523291 MYO15BQ96JP2 1530 aa33.21■■■□□ 2.91
ERGIC1-212ENST00000523291 UNC13AQ9UPW8 1703 aa33.19■■■□□ 2.9
ERGIC1-212ENST00000523291 ZCCHC6Q5VYS8 1495 aaKnown RBP33.12■■■□□ 2.89
ERGIC1-212ENST00000523291 PABPN1Q86U42 306 aaKnown RBP eCLIP32.95■■■□□ 2.87
ERGIC1-212ENST00000523291 DCAF1Q9Y4B6 1507 aa32.91■■■□□ 2.86
ERGIC1-212ENST00000523291 DNAJC5BQ9UF47 199 aa32.9■■■□□ 2.86
ERGIC1-212ENST00000523291 BICRAQ9NZM4 1560 aa32.86■■■□□ 2.85
ERGIC1-212ENST00000523291 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
ERGIC1-212ENST00000523291 SHROOM4Q9ULL8 1493 aa32.36■■■□□ 2.77
ERGIC1-212ENST00000523291 CC2D2AQ9P2K1 1620 aa32.03■■■□□ 2.72
ERGIC1-212ENST00000523291 EIF4G1Q04637 1599 aaKnown RBP32.02■■■□□ 2.72
ERGIC1-212ENST00000523291 CECR2Q9BXF3 1484 aa31.84■■■□□ 2.69
ERGIC1-212ENST00000523291 SMARCA4P51532 1647 aa31.09■■■□□ 2.57
ERGIC1-212ENST00000523291 NCAPD3P42695 1498 aa30.99■■■□□ 2.55
ERGIC1-212ENST00000523291 ATAD2BQ9ULI0 1458 aa30.98■■■□□ 2.55
ERGIC1-212ENST00000523291 SMARCA2P51531 1590 aa30.92■■■□□ 2.54
ERGIC1-212ENST00000523291 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
ERGIC1-212ENST00000523291 HMGXB3Q12766 1538 aa30.87■■■□□ 2.53
ERGIC1-212ENST00000523291 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
ERGIC1-212ENST00000523291 PEG3Q9GZU2 1588 aa30.74■■■□□ 2.51
ERGIC1-212ENST00000523291 BAZ1BQ9UIG0 1483 aaKnown RBP30.72■■■□□ 2.51
ERGIC1-212ENST00000523291 ERCC6Q03468 1493 aa30.54■■■□□ 2.48
ERGIC1-212ENST00000523291 NESP48681 1621 aa30.51■■■□□ 2.48
ERGIC1-212ENST00000523291 WIZO95785 1651 aa30.43■■■□□ 2.46
ERGIC1-212ENST00000523291 CUX2O14529 1486 aa30.37■■■□□ 2.45
ERGIC1-212ENST00000523291 LAMC3Q9Y6N6 1575 aa30.32■■■□□ 2.44
ERGIC1-212ENST00000523291 KIF21AQ7Z4S6 1674 aa30.21■■■□□ 2.43
ERGIC1-212ENST00000523291 THOC2Q8NI27 1593 aaKnown RBP30.2■■■□□ 2.42
ERGIC1-212ENST00000523291 RSF1Q96T23 1441 aaPredicted RBP30.15■■■□□ 2.42
ERGIC1-212ENST00000523291 PDS5BQ9NTI5 1447 aa30.06■■■□□ 2.4
ERGIC1-212ENST00000523291 CADPSQ9ULU8 1353 aa30.06■■■□□ 2.4
ERGIC1-212ENST00000523291 TOP2AP11388 1531 aaKnown RBP30.03■■■□□ 2.4
ERGIC1-212ENST00000523291 DNAJC5Q9H3Z4 198 aa29.95■■■□□ 2.39
ERGIC1-212ENST00000523291 MRC2Q9UBG0 1479 aa29.86■■■□□ 2.37
ERGIC1-212ENST00000523291 CFTRP13569 1480 aa29.8■■■□□ 2.36
ERGIC1-212ENST00000523291 WDR62O43379 1518 aa29.8■■■□□ 2.36
ERGIC1-212ENST00000523291 CEP164Q9UPV0 1460 aa29.8■■■□□ 2.36
ERGIC1-212ENST00000523291 FANCD2Q9BXW9 1451 aa29.78■■■□□ 2.36
ERGIC1-212ENST00000523291 PRDM2Q13029 1718 aa29.7■■■□□ 2.34
ERGIC1-212ENST00000523291 CCDC88BA6NC98 1476 aa29.64■■■□□ 2.34
ERGIC1-212ENST00000523291 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
ERGIC1-212ENST00000523291 TOPBP1Q92547 1522 aa29.26■■■□□ 2.27
ERGIC1-212ENST00000523291 DNMBPQ6XZF7 1577 aa29.2■■■□□ 2.26
ERGIC1-212ENST00000523291 IFT140Q96RY7 1462 aa29.16■■■□□ 2.26
ERGIC1-212ENST00000523291 ZNF608Q9ULD9 1512 aaPredicted RBP29.14■■■□□ 2.25
ERGIC1-212ENST00000523291 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
ERGIC1-212ENST00000523291 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
ERGIC1-212ENST00000523291 TARBP1Q13395 1621 aaKnown RBP29.01■■■□□ 2.23
ERGIC1-212ENST00000523291 SUPT5HO00267 1087 aaKnown RBP29■■■□□ 2.23
ERGIC1-212ENST00000523291 POLA1P09884 1462 aaPredicted RBP28.98■■■□□ 2.23
ERGIC1-212ENST00000523291 OSCARQ8IYS5 282 aa28.93■■■□□ 2.22
ERGIC1-212ENST00000523291 CUX1P39880 1505 aa28.89■■■□□ 2.21
ERGIC1-212ENST00000523291 RAD54L2Q9Y4B4 1467 aa28.87■■■□□ 2.21
ERGIC1-212ENST00000523291 AQRO60306 1485 aaKnown RBP eCLIP28.86■■■□□ 2.218e-7■□□□□ 9.1
ERGIC1-212ENST00000523291 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
ERGIC1-212ENST00000523291 TRIM41Q8WV44 630 aa28.83■■■□□ 2.21
ERGIC1-212ENST00000523291 CHD1O14646 1710 aa28.82■■■□□ 2.2
ERGIC1-212ENST00000523291 SOGA1O94964 1423 aa28.79■■■□□ 2.2
ERGIC1-212ENST00000523291 TDRD9Q8NDG6 1382 aaKnown RBP28.72■■■□□ 2.19
ERGIC1-212ENST00000523291 WDR97A6NE52 1622 aa28.72■■■□□ 2.19
ERGIC1-212ENST00000523291 RIMBP3CA6NJZ7 1639 aa28.7■■■□□ 2.19
ERGIC1-212ENST00000523291 RIMBP3BA6NNM3 1639 aa28.7■■■□□ 2.19
ERGIC1-212ENST00000523291 RIMBP3Q9UFD9 1639 aa28.7■■■□□ 2.19
ERGIC1-212ENST00000523291 SNAPC4Q5SXM2 1469 aa28.63■■■□□ 2.17
ERGIC1-212ENST00000523291 ARHGEF11O15085 1522 aa28.6■■■□□ 2.17
ERGIC1-212ENST00000523291 PBRM1Q86U86 1689 aa28.58■■■□□ 2.17
ERGIC1-212ENST00000523291 FBLN2P98095 1184 aa28.58■■■□□ 2.17
ERGIC1-212ENST00000523291 GRIN2BQ13224 1484 aa28.53■■■□□ 2.16
ERGIC1-212ENST00000523291 MAGI1Q96QZ7 1491 aaPredicted RBP28.53■■■□□ 2.16
ERGIC1-212ENST00000523291 BIVM-ERCC5R4GMW8 1640 aa28.52■■■□□ 2.16
ERGIC1-212ENST00000523291 ABCA5Q8WWZ7 1642 aa28.51■■■□□ 2.15
ERGIC1-212ENST00000523291 ABCA10Q8WWZ4 1543 aa28.51■■■□□ 2.15
ERGIC1-212ENST00000523291 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
ERGIC1-212ENST00000523291 TOP2BQ02880 1626 aa28.49■■■□□ 2.15
ERGIC1-212ENST00000523291 GAPVD1Q14C86 1478 aa28.48■■■□□ 2.15
ERGIC1-212ENST00000523291 WRNQ14191 1432 aaPredicted RBP eCLIP28.45■■■□□ 2.15
ERGIC1-212ENST00000523291 SYNJ2O15056 1496 aa28.42■■■□□ 2.14
ERGIC1-212ENST00000523291 CLASP1Q7Z460 1538 aa28.42■■■□□ 2.14
ERGIC1-212ENST00000523291 CHMP7Q8WUX9 453 aaPredicted RBP28.38■■■□□ 2.13
ERGIC1-212ENST00000523291 ARAP1Q96P48 1450 aa28.35■■■□□ 2.13
ERGIC1-212ENST00000523291 ADAMTS12P58397 1594 aa28.28■■■□□ 2.12
ERGIC1-212ENST00000523291 CYB5RLQ6IPT4 315 aa28.28■■■□□ 2.12
ERGIC1-212ENST00000523291 GRIN2AQ12879 1464 aa28.2■■■□□ 2.1
ERGIC1-212ENST00000523291 ERICH3Q5RHP9 1530 aa28.16■■■□□ 2.1
ERGIC1-212ENST00000523291 CEP170Q5SW79 1584 aa28.13■■■□□ 2.09
ERGIC1-212ENST00000523291 FHAD1B1AJZ9 1412 aa28.11■■■□□ 2.09
ERGIC1-212ENST00000523291 NUP160Q12769 1436 aa28.08■■■□□ 2.09
ERGIC1-212ENST00000523291 ERCC6L2Q5T890 1561 aa28.03■■■□□ 2.08
ERGIC1-212ENST00000523291 SHROOM2Q13796 1616 aa27.98■■■□□ 2.07
ERGIC1-212ENST00000523291 RUSC2Q8N2Y8 1516 aa27.89■■■□□ 2.06
ERGIC1-212ENST00000523291 TRHP20396 242 aaPredicted RBP27.88■■■□□ 2.05
ERGIC1-212ENST00000523291 KIF27Q86VH2 1401 aa27.87■■■□□ 2.05
ERGIC1-212ENST00000523291 CUL7Q14999 1698 aa27.85■■■□□ 2.05
ERGIC1-212ENST00000523291 IGF1RP08069 1367 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms