RNA–Protein interactions for RNA: ENST00000528870.5

TRIM29-210, Transcript of tripartite motif containing 29, humanhuman

TSL 2 BASIC

Gene TRIM29, Length 2,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-210ENST00000528870 NISCHQ9Y2I1 1504 aa31.58■■■□□ 2.65
TRIM29-210ENST00000528870 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.89
TRIM29-210ENST00000528870 CCDC180Q9P1Z9 1646 aa26.88■■□□□ 1.89
TRIM29-210ENST00000528870 ZCCHC6Q5VYS8 1495 aaKnown RBP26.72■■□□□ 1.87
TRIM29-210ENST00000528870 SUPT5HO00267 1087 aaKnown RBP26.39■■□□□ 1.82
TRIM29-210ENST00000528870 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.77
TRIM29-210ENST00000528870 DCAF1Q9Y4B6 1507 aa25.95■■□□□ 1.74
TRIM29-210ENST00000528870 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
TRIM29-210ENST00000528870 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.69
TRIM29-210ENST00000528870 ABCC9O60706 1549 aa25.24■■□□□ 1.63
TRIM29-210ENST00000528870 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
TRIM29-210ENST00000528870 RSF1Q96T23 1441 aaPredicted RBP24.98■■□□□ 1.59
TRIM29-210ENST00000528870 HRCP23327 699 aa24.97■■□□□ 1.59
TRIM29-210ENST00000528870 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
TRIM29-210ENST00000528870 LOC105371045A0A1W2PR82 267 aa24.9■■□□□ 1.58
TRIM29-210ENST00000528870 NACADO15069 1562 aa24.84■■□□□ 1.57
TRIM29-210ENST00000528870 RB1CC1Q8TDY2 1594 aa24.75■■□□□ 1.55
TRIM29-210ENST00000528870 TRIM41Q8WV44 630 aa24.63■■□□□ 1.53
TRIM29-210ENST00000528870 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
TRIM29-210ENST00000528870 MROH2BQ7Z745 1585 aa24.53■■□□□ 1.52
TRIM29-210ENST00000528870 TRIM26Q12899 539 aaPredicted RBP24.49■■□□□ 1.51
TRIM29-210ENST00000528870 WIZO95785 1651 aa24.4■■□□□ 1.5
TRIM29-210ENST00000528870 PPARGC1BQ86YN6 1023 aaKnown RBP24.38■■□□□ 1.49
TRIM29-210ENST00000528870 FAM9AQ8IZU1 332 aaPredicted RBP24.38■■□□□ 1.49
TRIM29-210ENST00000528870 BAZ1AQ9NRL2 1556 aaPredicted RBP24.3■■□□□ 1.48
TRIM29-210ENST00000528870 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
TRIM29-210ENST00000528870 EIF4G1Q04637 1599 aaKnown RBP24.1■■□□□ 1.45
TRIM29-210ENST00000528870 TOP2AP11388 1531 aaKnown RBP24.06■■□□□ 1.44
TRIM29-210ENST00000528870 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
TRIM29-210ENST00000528870 UNC13AQ9UPW8 1703 aa24.04■■□□□ 1.44
TRIM29-210ENST00000528870 ZEB1P37275 1124 aaPredicted RBP24.01■■□□□ 1.43
TRIM29-210ENST00000528870 CCDC88BA6NC98 1476 aa23.93■■□□□ 1.42
TRIM29-210ENST00000528870 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
TRIM29-210ENST00000528870 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
TRIM29-210ENST00000528870 BICRAQ9NZM4 1560 aa23.77■■□□□ 1.4
TRIM29-210ENST00000528870 PABPN1Q86U42 306 aaKnown RBP eCLIP23.71■■□□□ 1.39
TRIM29-210ENST00000528870 SOGA1O94964 1423 aa23.65■■□□□ 1.38
TRIM29-210ENST00000528870 EEA1Q15075 1411 aa23.61■■□□□ 1.37
TRIM29-210ENST00000528870 PEG3Q9GZU2 1588 aa23.6■■□□□ 1.37
TRIM29-210ENST00000528870 CEP162Q5TB80 1403 aa23.58■■□□□ 1.37
TRIM29-210ENST00000528870 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.37
TRIM29-210ENST00000528870 TNIKQ9UKE5 1360 aa23.56■■□□□ 1.36
TRIM29-210ENST00000528870 CSRNP3Q8WYN3 585 aa23.54■■□□□ 1.36
TRIM29-210ENST00000528870 RUSC2Q8N2Y8 1516 aa23.5■■□□□ 1.35
TRIM29-210ENST00000528870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.46■■□□□ 1.35
TRIM29-210ENST00000528870 UBTFP17480 764 aaKnown RBP23.45■■□□□ 1.35
TRIM29-210ENST00000528870 CCER1Q8TC90 406 aaPredicted RBP23.45■■□□□ 1.34
TRIM29-210ENST00000528870 GOLGA3Q08378 1498 aa23.43■■□□□ 1.34
TRIM29-210ENST00000528870 ATAD2BQ9ULI0 1458 aa23.41■■□□□ 1.34
TRIM29-210ENST00000528870 TTBK1Q5TCY1 1321 aaPredicted RBP23.39■■□□□ 1.34
TRIM29-210ENST00000528870 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
TRIM29-210ENST00000528870 SYNJ1O43426 1573 aa23.36■■□□□ 1.33
TRIM29-210ENST00000528870 CEP164Q9UPV0 1460 aa23.3■■□□□ 1.32
TRIM29-210ENST00000528870 KIF21BO75037 1637 aa23.27■■□□□ 1.32
TRIM29-210ENST00000528870 CLIP1P30622 1438 aa23.15■■□□□ 1.3
TRIM29-210ENST00000528870 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
TRIM29-210ENST00000528870 RAPGEF2Q9Y4G8 1499 aa23.08■■□□□ 1.28
TRIM29-210ENST00000528870 VPS8Q8N3P4 1428 aa23.06■■□□□ 1.28
TRIM29-210ENST00000528870 BIVM-ERCC5R4GMW8 1640 aa23.02■■□□□ 1.27
TRIM29-210ENST00000528870 PELP1Q8IZL8 1130 aaKnown RBP23■■□□□ 1.27
TRIM29-210ENST00000528870 DIEXFQ68CQ4 756 aaKnown RBP22.99■■□□□ 1.27
TRIM29-210ENST00000528870 SCAF1Q9H7N4 1312 aaKnown RBP22.99■■□□□ 1.27
TRIM29-210ENST00000528870 APLP2Q06481 763 aa22.98■■□□□ 1.27
TRIM29-210ENST00000528870 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
TRIM29-210ENST00000528870 NCAPD3P42695 1498 aa22.96■■□□□ 1.27
TRIM29-210ENST00000528870 RANGAP1P46060 587 aaPredicted RBP22.94■■□□□ 1.26
TRIM29-210ENST00000528870 HNRNPUL2Q1KMD3 747 aaKnown RBP22.93■■□□□ 1.26
TRIM29-210ENST00000528870 ERICH3Q5RHP9 1530 aa22.9■■□□□ 1.26
TRIM29-210ENST00000528870 PRXQ9BXM0 1461 aa22.86■■□□□ 1.25
TRIM29-210ENST00000528870 CUX1P39880 1505 aa22.84■■□□□ 1.25
TRIM29-210ENST00000528870 ZNF316A6NFI3 1004 aaPredicted RBP22.82■■□□□ 1.24
TRIM29-210ENST00000528870 ACIN1Q9UKV3 1341 aaKnown RBP22.81■■□□□ 1.24
TRIM29-210ENST00000528870 CFTRP13569 1480 aa22.79■■□□□ 1.24
TRIM29-210ENST00000528870 KIF27Q86VH2 1401 aa22.78■■□□□ 1.24
TRIM29-210ENST00000528870 ARAP1Q96P48 1450 aa22.76■■□□□ 1.23
TRIM29-210ENST00000528870 NEUROD1Q13562 356 aa22.74■■□□□ 1.23
TRIM29-210ENST00000528870 CENPBP07199 599 aaPredicted RBP22.73■■□□□ 1.23
TRIM29-210ENST00000528870 CC2D2AQ9P2K1 1620 aa22.65■■□□□ 1.22
TRIM29-210ENST00000528870 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
TRIM29-210ENST00000528870 KANK4Q5T7N3 995 aaPredicted RBP22.61■■□□□ 1.21
TRIM29-210ENST00000528870 ARHGAP35Q9NRY4 1499 aa22.55■■□□□ 1.2
TRIM29-210ENST00000528870 CUX2O14529 1486 aa22.54■■□□□ 1.2
TRIM29-210ENST00000528870 CLSPNQ9HAW4 1339 aa22.54■■□□□ 1.2
TRIM29-210ENST00000528870 GTF3C3Q9Y5Q9 886 aa22.53■■□□□ 1.2
TRIM29-210ENST00000528870 CADPSQ9ULU8 1353 aa22.52■■□□□ 1.2
TRIM29-210ENST00000528870 RRBP1Q9P2E9 1410 aaKnown RBP22.51■■□□□ 1.19
TRIM29-210ENST00000528870 DHX57Q6P158 1386 aaKnown RBP22.5■■□□□ 1.19
TRIM29-210ENST00000528870 IGF1RP08069 1367 aa22.49■■□□□ 1.19
TRIM29-210ENST00000528870 MIER1Q8N108 512 aa22.46■■□□□ 1.19
TRIM29-210ENST00000528870 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
TRIM29-210ENST00000528870 CCNB3Q8WWL7 1395 aa22.43■■□□□ 1.18
TRIM29-210ENST00000528870 YTHDC1Q96MU7 727 aaKnown RBP22.43■■□□□ 1.18
TRIM29-210ENST00000528870 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
TRIM29-210ENST00000528870 TIAM1Q13009 1591 aa22.34■■□□□ 1.17
TRIM29-210ENST00000528870 MAP3K1Q13233 1512 aa22.34■■□□□ 1.17
TRIM29-210ENST00000528870 FANCD2Q9BXW9 1451 aa22.31■■□□□ 1.16
TRIM29-210ENST00000528870 ITGAEP38570 1179 aa22.31■■□□□ 1.16
TRIM29-210ENST00000528870 FHAD1B1AJZ9 1412 aa22.25■■□□□ 1.15
TRIM29-210ENST00000528870 LRRC9Q6ZRR7 1453 aa22.25■■□□□ 1.15
TRIM29-210ENST00000528870 DNMBPQ6XZF7 1577 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 202.7 ms