RNA–Protein interactions for RNA: ENST00000589123.5

NFIC-206, Transcript of nuclear factor I C, humanhuman

TSL 1 (best) BASIC

Gene NFIC, Length 8,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-206ENST00000589123 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
NFIC-206ENST00000589123 PELP1Q8IZL8 1130 aaKnown RBP23.22■■□□□ 1.31
NFIC-206ENST00000589123 MYT1Q01538 1121 aa22.5■■□□□ 1.19
NFIC-206ENST00000589123 ERICH6Q7L0X2 663 aa22.38■■□□□ 1.17
NFIC-206ENST00000589123 EHMT2Q96KQ7 1210 aa22.36■■□□□ 1.17
NFIC-206ENST00000589123 CCER1Q8TC90 406 aaPredicted RBP22.09■■□□□ 1.13
NFIC-206ENST00000589123 SUPT5HO00267 1087 aaKnown RBP22.01■■□□□ 1.11
NFIC-206ENST00000589123 APLP2Q06481 763 aa21.84■■□□□ 1.09
NFIC-206ENST00000589123 FAM9AQ8IZU1 332 aaPredicted RBP21.77■■□□□ 1.07
NFIC-206ENST00000589123 YTHDC1Q96MU7 727 aaKnown RBP21.59■■□□□ 1.05
NFIC-206ENST00000589123 TTBK1Q5TCY1 1321 aaPredicted RBP21.59■■□□□ 1.05
NFIC-206ENST00000589123 CENPBP07199 599 aaPredicted RBP21.39■■□□□ 1.01
NFIC-206ENST00000589123 ATP1B4Q9UN42 357 aaPredicted RBP21.3■■□□□ 1
NFIC-206ENST00000589123 RANGAP1P46060 587 aaPredicted RBP21.27■■□□□ 1
NFIC-206ENST00000589123 SHROOM4Q9ULL8 1493 aa21.21■□□□□ 0.99
NFIC-206ENST00000589123 PCGF6Q9BYE7 350 aa21.15■□□□□ 0.98
NFIC-206ENST00000589123 NEFLP07196 543 aa21.13■□□□□ 0.97
NFIC-206ENST00000589123 DAXXQ9UER7 740 aaPredicted RBP21.08■□□□□ 0.96
NFIC-206ENST00000589123 MYT1LQ9UL68 1186 aa20.85■□□□□ 0.93
NFIC-206ENST00000589123 POLR3GLQ9BT43 218 aa20.74■□□□□ 0.91
NFIC-206ENST00000589123 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
NFIC-206ENST00000589123 CNGB1Q14028 1251 aaPredicted RBP20.62■□□□□ 0.89
NFIC-206ENST00000589123 SLC4A1APQ9BWU0 796 aaKnown RBP20.62■□□□□ 0.89
NFIC-206ENST00000589123 RTL5Q5HYW3 569 aaPredicted RBP20.57■□□□□ 0.88
NFIC-206ENST00000589123 ZEB1P37275 1124 aaPredicted RBP20.47■□□□□ 0.87
NFIC-206ENST00000589123 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
NFIC-206ENST00000589123 CLSPNQ9HAW4 1339 aa20.45■□□□□ 0.86
NFIC-206ENST00000589123 UBTFP17480 764 aaKnown RBP20.44■□□□□ 0.86
NFIC-206ENST00000589123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
NFIC-206ENST00000589123 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
NFIC-206ENST00000589123 GLIPR1L2Q4G1C9 344 aa20.28■□□□□ 0.84
NFIC-206ENST00000589123 ITGAEP38570 1179 aa20.2■□□□□ 0.82
NFIC-206ENST00000589123 SLC24A1O60721 1099 aa20.18■□□□□ 0.82
NFIC-206ENST00000589123 PPARGC1BQ86YN6 1023 aaKnown RBP20.17■□□□□ 0.82
NFIC-206ENST00000589123 BCL11AQ9H165 835 aa20.17■□□□□ 0.82
NFIC-206ENST00000589123 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
NFIC-206ENST00000589123 EIF5BO60841 1220 aaKnown RBP20.09■□□□□ 0.81
NFIC-206ENST00000589123 ZBTB47Q9UFB7 747 aaPredicted RBP20.04■□□□□ 0.8
NFIC-206ENST00000589123 BCANQ96GW7 911 aa19.72■□□□□ 0.75
NFIC-206ENST00000589123 CANXP27824 592 aaKnown RBP19.65■□□□□ 0.74
NFIC-206ENST00000589123 ANP32BQ92688 251 aaKnown RBP19.62■□□□□ 0.73
NFIC-206ENST00000589123 NEFMP07197 916 aa19.53■□□□□ 0.72
NFIC-206ENST00000589123 TRIM52Q96A61 297 aa19.49■□□□□ 0.71
NFIC-206ENST00000589123 CDK11AQ9UQ88 783 aaPredicted RBP19.48■□□□□ 0.71
NFIC-206ENST00000589123 ZNF326Q5BKZ1 582 aaKnown RBP19.48■□□□□ 0.71
NFIC-206ENST00000589123 CDK11BP21127 795 aaKnown RBP19.42■□□□□ 0.7
NFIC-206ENST00000589123 TNNT2P45379 298 aaPredicted RBP19.42■□□□□ 0.7
NFIC-206ENST00000589123 HRCP23327 699 aa19.4■□□□□ 0.7
NFIC-206ENST00000589123 FAM50AQ14320 339 aaKnown RBP19.39■□□□□ 0.7
NFIC-206ENST00000589123 HSP90AA1P07900 732 aaKnown RBP19.39■□□□□ 0.69
NFIC-206ENST00000589123 TRIM26Q12899 539 aaPredicted RBP19.37■□□□□ 0.69
NFIC-206ENST00000589123 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
NFIC-206ENST00000589123 NEUROD1Q13562 356 aa19.36■□□□□ 0.69
NFIC-206ENST00000589123 ANP32AP39687 249 aaKnown RBP19.33■□□□□ 0.68
NFIC-206ENST00000589123 NPM2Q86SE8 214 aaKnown RBP19.32■□□□□ 0.68
NFIC-206ENST00000589123 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
NFIC-206ENST00000589123 A0A0G2JS52 829 aa19.26■□□□□ 0.67
NFIC-206ENST00000589123 DIEXFQ68CQ4 756 aaKnown RBP19.21■□□□□ 0.67
NFIC-206ENST00000589123 TULP1O00294 542 aaPredicted RBP19.2■□□□□ 0.66
NFIC-206ENST00000589123 ANP32CO43423 234 aa19.18■□□□□ 0.66
NFIC-206ENST00000589123 ARXQ96QS3 562 aa19.16■□□□□ 0.66
NFIC-206ENST00000589123 SCAF1Q9H7N4 1312 aaKnown RBP19.14■□□□□ 0.65
NFIC-206ENST00000589123 GTF3C3Q9Y5Q9 886 aa19.13■□□□□ 0.65
NFIC-206ENST00000589123 ESF1Q9H501 851 aaKnown RBP19.11■□□□□ 0.65
NFIC-206ENST00000589123 FBLN2P98095 1184 aa19.09■□□□□ 0.65
NFIC-206ENST00000589123 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.65
NFIC-206ENST00000589123 UPF2Q9HAU5 1272 aaKnown RBP19.04■□□□□ 0.64
NFIC-206ENST00000589123 STAG3Q9UJ98 1225 aa19.02■□□□□ 0.64
NFIC-206ENST00000589123 TRIM44Q96DX7 344 aaPredicted RBP18.97■□□□□ 0.63
NFIC-206ENST00000589123 PLEKHG5O94827 1062 aa18.96■□□□□ 0.63
NFIC-206ENST00000589123 NBR1Q14596 966 aa18.95■□□□□ 0.62
NFIC-206ENST00000589123 LOC105371045A0A1W2PR82 267 aa18.93■□□□□ 0.62
NFIC-206ENST00000589123 CHGAP10645 457 aaKnown RBP18.93■□□□□ 0.62
NFIC-206ENST00000589123 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
NFIC-206ENST00000589123 ARID3CA6NKF2 412 aa18.85■□□□□ 0.61
NFIC-206ENST00000589123 SALL2Q9Y467 1007 aaPredicted RBP18.84■□□□□ 0.61
NFIC-206ENST00000589123 ZBTB7CA1YPR0 619 aa18.83■□□□□ 0.61
NFIC-206ENST00000589123 NCLP19338 710 aaKnown RBP18.82■□□□□ 0.6
NFIC-206ENST00000589123 ZNF777Q9ULD5 760 aaPredicted RBP18.77■□□□□ 0.59
NFIC-206ENST00000589123 TPRNQ4KMQ1 711 aa18.75■□□□□ 0.59
NFIC-206ENST00000589123 TAOK2Q9UL54 1235 aa18.72■□□□□ 0.59
NFIC-206ENST00000589123 C14orf37Q86TY3 774 aa18.69■□□□□ 0.58
NFIC-206ENST00000589123 ZRSR1Q15695 479 aaKnown RBP18.69■□□□□ 0.58
NFIC-206ENST00000589123 DNTTIP2Q5QJE6 756 aaKnown RBP18.69■□□□□ 0.58
NFIC-206ENST00000589123 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.67■□□□□ 0.58
NFIC-206ENST00000589123 MYH16Q9H6N6 1097 aa18.66■□□□□ 0.58
NFIC-206ENST00000589123 NAP1L5Q96NT1 182 aaPredicted RBP18.65■□□□□ 0.58
NFIC-206ENST00000589123 SENP3Q9H4L4 574 aaPredicted RBP18.63■□□□□ 0.57
NFIC-206ENST00000589123 CLSTN1O94985 981 aa18.63■□□□□ 0.57
NFIC-206ENST00000589123 NPHP1O15259 732 aa18.62■□□□□ 0.57
NFIC-206ENST00000589123 HAP1P54257 671 aaPredicted RBP18.61■□□□□ 0.57
NFIC-206ENST00000589123 FAM9BQ8IZU0 186 aa18.58■□□□□ 0.57
NFIC-206ENST00000589123 FKBP8Q14318 412 aa18.58■□□□□ 0.56
NFIC-206ENST00000589123 CALRP27797 417 aaKnown RBP18.57■□□□□ 0.56
NFIC-206ENST00000589123 PTMAP06454 111 aaKnown RBP18.56■□□□□ 0.56
NFIC-206ENST00000589123 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
NFIC-206ENST00000589123 PRM3Q9NNZ6 103 aa18.56■□□□□ 0.56
NFIC-206ENST00000589123 ERICH6BQ5W0A0 696 aa18.56■□□□□ 0.56
NFIC-206ENST00000589123 ANP32EQ9BTT0 268 aa18.54■□□□□ 0.56
NFIC-206ENST00000589123 CCDC136Q96JN2 1154 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms