RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 NISCHQ9Y2I1 1504 aa36.94■■■■□ 3.5
GRIA3-205ENST00000611689 CCDC180Q9P1Z9 1646 aa32.57■■■□□ 2.8
GRIA3-205ENST00000611689 ABCC9O60706 1549 aa31.54■■■□□ 2.64
GRIA3-205ENST00000611689 ZCCHC6Q5VYS8 1495 aaKnown RBP30.84■■■□□ 2.53
GRIA3-205ENST00000611689 DCAF8L2P0C7V8 631 aa30.74■■■□□ 2.51
GRIA3-205ENST00000611689 NACADO15069 1562 aa30.57■■■□□ 2.48
GRIA3-205ENST00000611689 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.48
GRIA3-205ENST00000611689 MYO15BQ96JP2 1530 aa30.53■■■□□ 2.48
GRIA3-205ENST00000611689 RB1CC1Q8TDY2 1594 aa30.49■■■□□ 2.47
GRIA3-205ENST00000611689 SCRIBQ14160 1630 aa29.78■■■□□ 2.36
GRIA3-205ENST00000611689 UNC13AQ9UPW8 1703 aa29.74■■■□□ 2.35
GRIA3-205ENST00000611689 PABPN1Q86U42 306 aaKnown RBP eCLIP29.6■■■□□ 2.33
GRIA3-205ENST00000611689 BICRAQ9NZM4 1560 aa29.57■■■□□ 2.32
GRIA3-205ENST00000611689 SHROOM4Q9ULL8 1493 aa29.47■■■□□ 2.31
GRIA3-205ENST00000611689 CECR2Q9BXF3 1484 aa28.75■■■□□ 2.19
GRIA3-205ENST00000611689 EIF4G1Q04637 1599 aaKnown RBP28.75■■■□□ 2.19
GRIA3-205ENST00000611689 DNAJC5BQ9UF47 199 aa28.63■■■□□ 2.17
GRIA3-205ENST00000611689 BAZ1AQ9NRL2 1556 aaPredicted RBP28.57■■■□□ 2.16
GRIA3-205ENST00000611689 SMARCA4P51532 1647 aa28.53■■■□□ 2.16
GRIA3-205ENST00000611689 CC2D2AQ9P2K1 1620 aa28.52■■■□□ 2.16
GRIA3-205ENST00000611689 MROH2BQ7Z745 1585 aa28.48■■■□□ 2.15
GRIA3-205ENST00000611689 RSF1Q96T23 1441 aaPredicted RBP28.34■■■□□ 2.13
GRIA3-205ENST00000611689 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
GRIA3-205ENST00000611689 SMARCA2P51531 1590 aa28.27■■■□□ 2.12
GRIA3-205ENST00000611689 PEG3Q9GZU2 1588 aa28.25■■■□□ 2.11
GRIA3-205ENST00000611689 NCAPD3P42695 1498 aa28.24■■■□□ 2.11
GRIA3-205ENST00000611689 WIZO95785 1651 aa28.16■■■□□ 2.1
GRIA3-205ENST00000611689 HMGXB3Q12766 1538 aa28.09■■■□□ 2.09
GRIA3-205ENST00000611689 BAZ1BQ9UIG0 1483 aaKnown RBP28.08■■■□□ 2.09
GRIA3-205ENST00000611689 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
GRIA3-205ENST00000611689 TOP2AP11388 1531 aaKnown RBP27.89■■■□□ 2.06
GRIA3-205ENST00000611689 CCDC88BA6NC98 1476 aa27.61■■■□□ 2.01
GRIA3-205ENST00000611689 CADPSQ9ULU8 1353 aa27.45■■□□□ 1.98
GRIA3-205ENST00000611689 NESP48681 1621 aa27.42■■□□□ 1.98
GRIA3-205ENST00000611689 LAMC3Q9Y6N6 1575 aa27.37■■□□□ 1.97
GRIA3-205ENST00000611689 CFTRP13569 1480 aa27.37■■□□□ 1.97
GRIA3-205ENST00000611689 PDS5BQ9NTI5 1447 aa27.22■■□□□ 1.95
GRIA3-205ENST00000611689 ERCC6Q03468 1493 aa27.13■■□□□ 1.93
GRIA3-205ENST00000611689 FANCD2Q9BXW9 1451 aa27.11■■□□□ 1.93
GRIA3-205ENST00000611689 PRDM2Q13029 1718 aa27.06■■□□□ 1.92
GRIA3-205ENST00000611689 KIF21AQ7Z4S6 1674 aa27.04■■□□□ 1.92
GRIA3-205ENST00000611689 CEP164Q9UPV0 1460 aa27.02■■□□□ 1.92
GRIA3-205ENST00000611689 MRC2Q9UBG0 1479 aa26.9■■□□□ 1.9
GRIA3-205ENST00000611689 THOC2Q8NI27 1593 aaKnown RBP26.86■■□□□ 1.89
GRIA3-205ENST00000611689 URB2Q14146 1524 aaKnown RBP26.81■■□□□ 1.88
GRIA3-205ENST00000611689 WDR62O43379 1518 aa26.78■■□□□ 1.88
GRIA3-205ENST00000611689 ABCC8Q09428 1581 aa26.74■■□□□ 1.87
GRIA3-205ENST00000611689 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
GRIA3-205ENST00000611689 DNMBPQ6XZF7 1577 aa26.71■■□□□ 1.87
GRIA3-205ENST00000611689 CUX1P39880 1505 aa26.69■■□□□ 1.86
GRIA3-205ENST00000611689 CUX2O14529 1486 aa26.68■■□□□ 1.86
GRIA3-205ENST00000611689 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
GRIA3-205ENST00000611689 SYNJ1O43426 1573 aa26.56■■□□□ 1.84
GRIA3-205ENST00000611689 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
GRIA3-205ENST00000611689 POLA1P09884 1462 aaPredicted RBP26.53■■□□□ 1.84
GRIA3-205ENST00000611689 FGD5Q6ZNL6 1462 aa26.52■■□□□ 1.84
GRIA3-205ENST00000611689 BIVM-ERCC5R4GMW8 1640 aa26.51■■□□□ 1.83
GRIA3-205ENST00000611689 IFT140Q96RY7 1462 aa26.45■■□□□ 1.82
GRIA3-205ENST00000611689 SOGA1O94964 1423 aa26.45■■□□□ 1.82
GRIA3-205ENST00000611689 RAD54L2Q9Y4B4 1467 aa26.42■■□□□ 1.82
GRIA3-205ENST00000611689 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
GRIA3-205ENST00000611689 TARBP1Q13395 1621 aaKnown RBP26.38■■□□□ 1.81
GRIA3-205ENST00000611689 CHIC1Q5VXU3 224 aa26.37■■□□□ 1.81
GRIA3-205ENST00000611689 ZNF608Q9ULD9 1512 aaPredicted RBP26.3■■□□□ 1.8
GRIA3-205ENST00000611689 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
GRIA3-205ENST00000611689 TDRD9Q8NDG6 1382 aaKnown RBP26.26■■□□□ 1.79
GRIA3-205ENST00000611689 AQRO60306 1485 aaKnown RBP eCLIP26.23■■□□□ 1.79
GRIA3-205ENST00000611689 WDR97A6NE52 1622 aa26.22■■□□□ 1.79
GRIA3-205ENST00000611689 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
GRIA3-205ENST00000611689 GAPVD1Q14C86 1478 aa26.13■■□□□ 1.77
GRIA3-205ENST00000611689 ABCA5Q8WWZ7 1642 aa26.11■■□□□ 1.77
GRIA3-205ENST00000611689 KIF27Q86VH2 1401 aa26.09■■□□□ 1.77
GRIA3-205ENST00000611689 GRIN2BQ13224 1484 aa26.07■■□□□ 1.76
GRIA3-205ENST00000611689 RUSC2Q8N2Y8 1516 aa26.01■■□□□ 1.75
GRIA3-205ENST00000611689 IGF1RP08069 1367 aa25.97■■□□□ 1.75
GRIA3-205ENST00000611689 ERICH3Q5RHP9 1530 aa25.97■■□□□ 1.75
GRIA3-205ENST00000611689 SNAPC4Q5SXM2 1469 aa25.97■■□□□ 1.75
GRIA3-205ENST00000611689 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
GRIA3-205ENST00000611689 MAGI1Q96QZ7 1491 aaPredicted RBP25.94■■□□□ 1.74
GRIA3-205ENST00000611689 EEA1Q15075 1411 aa25.87■■□□□ 1.73
GRIA3-205ENST00000611689 FHAD1B1AJZ9 1412 aa25.85■■□□□ 1.73
GRIA3-205ENST00000611689 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
GRIA3-205ENST00000611689 FBLN2P98095 1184 aa25.84■■□□□ 1.73
GRIA3-205ENST00000611689 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
GRIA3-205ENST00000611689 FAM9AQ8IZU1 332 aaPredicted RBP25.83■■□□□ 1.73
GRIA3-205ENST00000611689 ADAMTS12P58397 1594 aa25.82■■□□□ 1.72
GRIA3-205ENST00000611689 CSRNP3Q8WYN3 585 aa25.82■■□□□ 1.72
GRIA3-205ENST00000611689 CARMIL1Q5VZK9 1371 aa25.81■■□□□ 1.72
GRIA3-205ENST00000611689 CUL7Q14999 1698 aa25.77■■□□□ 1.72
GRIA3-205ENST00000611689 GRIN2AQ12879 1464 aa25.72■■□□□ 1.71
GRIA3-205ENST00000611689 CHD1O14646 1710 aa25.72■■□□□ 1.71
GRIA3-205ENST00000611689 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
GRIA3-205ENST00000611689 PRXQ9BXM0 1461 aa25.71■■□□□ 1.71
GRIA3-205ENST00000611689 RAPGEF2Q9Y4G8 1499 aa25.68■■□□□ 1.7
GRIA3-205ENST00000611689 NUP160Q12769 1436 aa25.61■■□□□ 1.69
GRIA3-205ENST00000611689 CEP170Q5SW79 1584 aa25.56■■□□□ 1.68
GRIA3-205ENST00000611689 KIF21BO75037 1637 aa25.53■■□□□ 1.68
GRIA3-205ENST00000611689 CLASP1Q7Z460 1538 aa25.51■■□□□ 1.67
GRIA3-205ENST00000611689 KIAA0586Q9BVV6 1533 aa25.47■■□□□ 1.67
GRIA3-205ENST00000611689 EHMT2Q96KQ7 1210 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms