Protein–RNA interactions for Protein: O95696

BRD1, Bromodomain-containing protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1O95696 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
BRD1O95696 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
BRD1O95696 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.75■□□□□ 0.43
BRD1O95696 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.75■□□□□ 0.43
BRD1O95696 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.75■□□□□ 0.43
BRD1O95696 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.75■□□□□ 0.43
BRD1O95696 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.75■□□□□ 0.43
BRD1O95696 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.75■□□□□ 0.43
BRD1O95696 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 AL158211.3-201ENST00000607385 239 ntBASIC17.75■□□□□ 0.43
BRD1O95696 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.75■□□□□ 0.43
BRD1O95696 AL390754.1-201ENST00000619088 582 ntBASIC17.75■□□□□ 0.43
BRD1O95696 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.75■□□□□ 0.43
BRD1O95696 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
BRD1O95696 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.75■□□□□ 0.43
BRD1O95696 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 AC010327.5-201ENST00000586923 3061 ntBASIC17.75■□□□□ 0.43
BRD1O95696 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.75■□□□□ 0.43
BRD1O95696 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRD1O95696 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.74■□□□□ 0.43
BRD1O95696 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.74■□□□□ 0.43
BRD1O95696 TREML5P-201ENST00000421694 576 ntBASIC17.74■□□□□ 0.43
BRD1O95696 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.74■□□□□ 0.43
BRD1O95696 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.74■□□□□ 0.43
BRD1O95696 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.74■□□□□ 0.43
BRD1O95696 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.74■□□□□ 0.43
BRD1O95696 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.74■□□□□ 0.43
BRD1O95696 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.74■□□□□ 0.43
BRD1O95696 AC074044.1-201ENST00000609673 707 ntBASIC17.74■□□□□ 0.43
BRD1O95696 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.74■□□□□ 0.43
BRD1O95696 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
BRD1O95696 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.74■□□□□ 0.43
BRD1O95696 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.74■□□□□ 0.43
BRD1O95696 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.74■□□□□ 0.43
BRD1O95696 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
BRD1O95696 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRD1O95696 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
BRD1O95696 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BRD1O95696 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BRD1O95696 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BRD1O95696 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRD1O95696 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.73■□□□□ 0.43
BRD1O95696 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRD1O95696 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.73■□□□□ 0.43
BRD1O95696 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.73■□□□□ 0.43
BRD1O95696 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BRD1O95696 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BRD1O95696 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRD1O95696 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.73■□□□□ 0.43
BRD1O95696 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRD1O95696 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRD1O95696 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRD1O95696 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRD1O95696 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BRD1O95696 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.73■□□□□ 0.43
BRD1O95696 HLA-V-201ENST00000429037 534 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms