RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 NISCHQ9Y2I1 1504 aa25.75■■□□□ 1.71
SPOCK1-202ENST00000394945 DCAF8L2P0C7V8 631 aa25.69■■□□□ 1.7
SPOCK1-202ENST00000394945 SUPT5HO00267 1087 aaKnown RBP25.33■■□□□ 1.65
SPOCK1-202ENST00000394945 PELP1Q8IZL8 1130 aaKnown RBP24.91■■□□□ 1.58
SPOCK1-202ENST00000394945 PCGF6Q9BYE7 350 aa24.69■■□□□ 1.54
SPOCK1-202ENST00000394945 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
SPOCK1-202ENST00000394945 MYT1Q01538 1121 aa24.54■■□□□ 1.52
SPOCK1-202ENST00000394945 EHMT2Q96KQ7 1210 aa24.38■■□□□ 1.49
SPOCK1-202ENST00000394945 CENPBP07199 599 aaPredicted RBP24.33■■□□□ 1.49
SPOCK1-202ENST00000394945 ZEB1P37275 1124 aaPredicted RBP24.18■■□□□ 1.46
SPOCK1-202ENST00000394945 HRCP23327 699 aa23.97■■□□□ 1.43
SPOCK1-202ENST00000394945 ERICH6Q7L0X2 663 aa23.88■■□□□ 1.41
SPOCK1-202ENST00000394945 FAM9AQ8IZU1 332 aaPredicted RBP23.85■■□□□ 1.41
SPOCK1-202ENST00000394945 CCER1Q8TC90 406 aaPredicted RBP23.81■■□□□ 1.4
SPOCK1-202ENST00000394945 TTBK1Q5TCY1 1321 aaPredicted RBP23.73■■□□□ 1.39
SPOCK1-202ENST00000394945 APLP2Q06481 763 aa23.72■■□□□ 1.39
SPOCK1-202ENST00000394945 YTHDC1Q96MU7 727 aaKnown RBP23.66■■□□□ 1.38
SPOCK1-202ENST00000394945 PPARGC1BQ86YN6 1023 aaKnown RBP23.48■■□□□ 1.35
SPOCK1-202ENST00000394945 TRIM26Q12899 539 aaPredicted RBP23.47■■□□□ 1.35
SPOCK1-202ENST00000394945 NEFLP07196 543 aa23.39■■□□□ 1.33
SPOCK1-202ENST00000394945 TRIM41Q8WV44 630 aa23.33■■□□□ 1.33
SPOCK1-202ENST00000394945 LOC105371045A0A1W2PR82 267 aa22.99■■□□□ 1.27
SPOCK1-202ENST00000394945 RANGAP1P46060 587 aaPredicted RBP22.97■■□□□ 1.27
SPOCK1-202ENST00000394945 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
SPOCK1-202ENST00000394945 GTF3C3Q9Y5Q9 886 aa22.91■■□□□ 1.26
SPOCK1-202ENST00000394945 DIEXFQ68CQ4 756 aaKnown RBP22.9■■□□□ 1.26
SPOCK1-202ENST00000394945 UBTFP17480 764 aaKnown RBP22.9■■□□□ 1.26
SPOCK1-202ENST00000394945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
SPOCK1-202ENST00000394945 ACIN1Q9UKV3 1341 aaKnown RBP22.63■■□□□ 1.21
SPOCK1-202ENST00000394945 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
SPOCK1-202ENST00000394945 DAXXQ9UER7 740 aaPredicted RBP22.54■■□□□ 1.2
SPOCK1-202ENST00000394945 HNRNPUL2Q1KMD3 747 aaKnown RBP22.52■■□□□ 1.2
SPOCK1-202ENST00000394945 RTL5Q5HYW3 569 aaPredicted RBP22.52■■□□□ 1.2
SPOCK1-202ENST00000394945 BCANQ96GW7 911 aa22.39■■□□□ 1.18
SPOCK1-202ENST00000394945 ITGAEP38570 1179 aa22.32■■□□□ 1.16
SPOCK1-202ENST00000394945 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
SPOCK1-202ENST00000394945 ZNF316A6NFI3 1004 aaPredicted RBP22.23■■□□□ 1.15
SPOCK1-202ENST00000394945 ABCC9O60706 1549 aa22.23■■□□□ 1.15
SPOCK1-202ENST00000394945 NEUROD1Q13562 356 aa22.14■■□□□ 1.14
SPOCK1-202ENST00000394945 CDK11AQ9UQ88 783 aaPredicted RBP22.14■■□□□ 1.14
SPOCK1-202ENST00000394945 POLR3GLQ9BT43 218 aa22.13■■□□□ 1.13
SPOCK1-202ENST00000394945 CNGB1Q14028 1251 aaPredicted RBP22.09■■□□□ 1.13
SPOCK1-202ENST00000394945 PABPN1Q86U42 306 aaKnown RBP eCLIP21.97■■□□□ 1.11
SPOCK1-202ENST00000394945 CLSPNQ9HAW4 1339 aa21.92■■□□□ 1.1
SPOCK1-202ENST00000394945 ANP32CO43423 234 aa21.88■■□□□ 1.09
SPOCK1-202ENST00000394945 EIF5BO60841 1220 aaKnown RBP21.83■■□□□ 1.08
SPOCK1-202ENST00000394945 FKBP8Q14318 412 aa21.8■■□□□ 1.08
SPOCK1-202ENST00000394945 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
SPOCK1-202ENST00000394945 ANP32AP39687 249 aaKnown RBP21.75■■□□□ 1.07
SPOCK1-202ENST00000394945 MYT1LQ9UL68 1186 aa21.73■■□□□ 1.07
SPOCK1-202ENST00000394945 FAM50AQ14320 339 aaKnown RBP21.62■■□□□ 1.05
SPOCK1-202ENST00000394945 ANP32EQ9BTT0 268 aa21.61■■□□□ 1.05
SPOCK1-202ENST00000394945 NPM2Q86SE8 214 aaKnown RBP21.55■■□□□ 1.04
SPOCK1-202ENST00000394945 MIER1Q8N108 512 aa21.55■■□□□ 1.04
SPOCK1-202ENST00000394945 NBR1Q14596 966 aa21.52■■□□□ 1.04
SPOCK1-202ENST00000394945 GLIPR1L2Q4G1C9 344 aa21.48■■□□□ 1.03
SPOCK1-202ENST00000394945 TRIM52Q96A61 297 aa21.44■■□□□ 1.02
SPOCK1-202ENST00000394945 HNRNPUQ00839 825 aaKnown RBP eCLIP21.4■■□□□ 1.02
SPOCK1-202ENST00000394945 BCL11AQ9H165 835 aa21.39■■□□□ 1.01
SPOCK1-202ENST00000394945 ZBTB47Q9UFB7 747 aaPredicted RBP21.38■■□□□ 1.01
SPOCK1-202ENST00000394945 DDX10Q13206 875 aaKnown RBP21.37■■□□□ 1.01
SPOCK1-202ENST00000394945 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
SPOCK1-202ENST00000394945 SLC4A1APQ9BWU0 796 aaKnown RBP21.27■■□□□ 1
SPOCK1-202ENST00000394945 ZNF326Q5BKZ1 582 aaKnown RBP21.27■■□□□ 1
SPOCK1-202ENST00000394945 CSRNP3Q8WYN3 585 aa21.24■□□□□ 0.99
SPOCK1-202ENST00000394945 CCDC136Q96JN2 1154 aa21.22■□□□□ 0.99
SPOCK1-202ENST00000394945 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
SPOCK1-202ENST00000394945 IRX6P78412 446 aaPredicted RBP21.2■□□□□ 0.98
SPOCK1-202ENST00000394945 FAM9BQ8IZU0 186 aa21.17■□□□□ 0.98
SPOCK1-202ENST00000394945 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
SPOCK1-202ENST00000394945 CANXP27824 592 aaKnown RBP21.15■□□□□ 0.98
SPOCK1-202ENST00000394945 CCDC180Q9P1Z9 1646 aa21.12■□□□□ 0.97
SPOCK1-202ENST00000394945 ANP32BQ92688 251 aaKnown RBP21.12■□□□□ 0.97
SPOCK1-202ENST00000394945 SUPT16HQ9Y5B9 1047 aaKnown RBP21.11■□□□□ 0.97
SPOCK1-202ENST00000394945 TONSLQ96HA7 1378 aa21.04■□□□□ 0.96
SPOCK1-202ENST00000394945 ARXQ96QS3 562 aa21.03■□□□□ 0.96
SPOCK1-202ENST00000394945 RTN4Q9NQC3 1192 aaKnown RBP21■□□□□ 0.95
SPOCK1-202ENST00000394945 UPF2Q9HAU5 1272 aaKnown RBP20.98■□□□□ 0.95
SPOCK1-202ENST00000394945 MRS2Q9HD23 443 aa20.95■□□□□ 0.95
SPOCK1-202ENST00000394945 HSP90AA1P07900 732 aaKnown RBP20.94■□□□□ 0.94
SPOCK1-202ENST00000394945 SALL2Q9Y467 1007 aaPredicted RBP20.94■□□□□ 0.94
SPOCK1-202ENST00000394945 HIRIP3Q9BW71 556 aaPredicted RBP20.92■□□□□ 0.94
SPOCK1-202ENST00000394945 NEFMP07197 916 aa20.91■□□□□ 0.94
SPOCK1-202ENST00000394945 DEKP35659 375 aaKnown RBP20.88■□□□□ 0.93
SPOCK1-202ENST00000394945 RBM19Q9Y4C8 960 aaKnown RBP20.87■□□□□ 0.93
SPOCK1-202ENST00000394945 TMC1Q8TDI8 760 aa20.87■□□□□ 0.93
SPOCK1-202ENST00000394945 FBLN2P98095 1184 aa20.86■□□□□ 0.93
SPOCK1-202ENST00000394945 NOP58Q9Y2X3 529 aaKnown RBP20.86■□□□□ 0.93
SPOCK1-202ENST00000394945 P3H3Q8IVL6 736 aa20.84■□□□□ 0.93
SPOCK1-202ENST00000394945 ERICH6BQ5W0A0 696 aa20.84■□□□□ 0.93
SPOCK1-202ENST00000394945 DDRGK1Q96HY6 314 aa20.83■□□□□ 0.92
SPOCK1-202ENST00000394945 PPM1GO15355 546 aaPredicted RBP20.82■□□□□ 0.92
SPOCK1-202ENST00000394945 TSHZ2Q9NRE2 1034 aa20.78■□□□□ 0.92
SPOCK1-202ENST00000394945 PPP4R2Q9NY27 417 aa20.77■□□□□ 0.92
SPOCK1-202ENST00000394945 LAS1LQ9Y4W2 734 aaKnown RBP20.76■□□□□ 0.91
SPOCK1-202ENST00000394945 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.75■□□□□ 0.91
SPOCK1-202ENST00000394945 TRIM44Q96DX7 344 aaPredicted RBP20.72■□□□□ 0.91
SPOCK1-202ENST00000394945 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
SPOCK1-202ENST00000394945 NAP1L5Q96NT1 182 aaPredicted RBP20.67■□□□□ 0.9
SPOCK1-202ENST00000394945 BECN1Q14457 450 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms