RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
FBXO28-201ENST00000366862 PELP1Q8IZL8 1130 aaKnown RBP25.34■■□□□ 1.65
FBXO28-201ENST00000366862 SUPT5HO00267 1087 aaKnown RBP25.27■■□□□ 1.64
FBXO28-201ENST00000366862 NISCHQ9Y2I1 1504 aa24.91■■□□□ 1.58
FBXO28-201ENST00000366862 MYT1Q01538 1121 aa24.83■■□□□ 1.57
FBXO28-201ENST00000366862 SHROOM4Q9ULL8 1493 aa24.54■■□□□ 1.52
FBXO28-201ENST00000366862 CENPBP07199 599 aaPredicted RBP24.51■■□□□ 1.51
FBXO28-201ENST00000366862 PCGF6Q9BYE7 350 aa24.49■■□□□ 1.51
FBXO28-201ENST00000366862 ZEB1P37275 1124 aaPredicted RBP24.45■■□□□ 1.5
FBXO28-201ENST00000366862 EHMT2Q96KQ7 1210 aa24.22■■□□□ 1.47
FBXO28-201ENST00000366862 ERICH6Q7L0X2 663 aa24.17■■□□□ 1.46
FBXO28-201ENST00000366862 CCER1Q8TC90 406 aaPredicted RBP24.12■■□□□ 1.45
FBXO28-201ENST00000366862 APLP2Q06481 763 aa24.1■■□□□ 1.45
FBXO28-201ENST00000366862 HRCP23327 699 aa23.78■■□□□ 1.4
FBXO28-201ENST00000366862 FAM9AQ8IZU1 332 aaPredicted RBP23.76■■□□□ 1.39
FBXO28-201ENST00000366862 NEFLP07196 543 aa23.64■■□□□ 1.38
FBXO28-201ENST00000366862 TTBK1Q5TCY1 1321 aaPredicted RBP23.6■■□□□ 1.37
FBXO28-201ENST00000366862 YTHDC1Q96MU7 727 aaKnown RBP23.55■■□□□ 1.36
FBXO28-201ENST00000366862 TRIM26Q12899 539 aaPredicted RBP23.51■■□□□ 1.35
FBXO28-201ENST00000366862 TRIM41Q8WV44 630 aa23.46■■□□□ 1.35
FBXO28-201ENST00000366862 UBTFP17480 764 aaKnown RBP23.05■■□□□ 1.28
FBXO28-201ENST00000366862 PPARGC1BQ86YN6 1023 aaKnown RBP23.03■■□□□ 1.28
FBXO28-201ENST00000366862 RANGAP1P46060 587 aaPredicted RBP22.97■■□□□ 1.27
FBXO28-201ENST00000366862 DAXXQ9UER7 740 aaPredicted RBP22.88■■□□□ 1.25
FBXO28-201ENST00000366862 DIEXFQ68CQ4 756 aaKnown RBP22.85■■□□□ 1.25
FBXO28-201ENST00000366862 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.24
FBXO28-201ENST00000366862 ATP1B4Q9UN42 357 aaPredicted RBP22.75■■□□□ 1.23
FBXO28-201ENST00000366862 RTL5Q5HYW3 569 aaPredicted RBP22.73■■□□□ 1.23
FBXO28-201ENST00000366862 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
FBXO28-201ENST00000366862 GTF3C3Q9Y5Q9 886 aa22.71■■□□□ 1.23
FBXO28-201ENST00000366862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.54■■□□□ 1.2
FBXO28-201ENST00000366862 ACIN1Q9UKV3 1341 aaKnown RBP22.49■■□□□ 1.19
FBXO28-201ENST00000366862 HNRNPUL2Q1KMD3 747 aaKnown RBP22.48■■□□□ 1.19
FBXO28-201ENST00000366862 ZNF316A6NFI3 1004 aaPredicted RBP22.39■■□□□ 1.17
FBXO28-201ENST00000366862 ITGAEP38570 1179 aa22.33■■□□□ 1.17
FBXO28-201ENST00000366862 CDK11AQ9UQ88 783 aaPredicted RBP22.3■■□□□ 1.16
FBXO28-201ENST00000366862 BCANQ96GW7 911 aa22.24■■□□□ 1.15
FBXO28-201ENST00000366862 POLR3GLQ9BT43 218 aa22.24■■□□□ 1.15
FBXO28-201ENST00000366862 CLSPNQ9HAW4 1339 aa22.23■■□□□ 1.15
FBXO28-201ENST00000366862 ANP32CO43423 234 aa22.07■■□□□ 1.12
FBXO28-201ENST00000366862 MYT1LQ9UL68 1186 aa22.04■■□□□ 1.12
FBXO28-201ENST00000366862 CNGB1Q14028 1251 aaPredicted RBP21.99■■□□□ 1.11
FBXO28-201ENST00000366862 ANP32AP39687 249 aaKnown RBP21.93■■□□□ 1.1
FBXO28-201ENST00000366862 SCAF1Q9H7N4 1312 aaKnown RBP21.88■■□□□ 1.09
FBXO28-201ENST00000366862 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
FBXO28-201ENST00000366862 NEUROD1Q13562 356 aa21.82■■□□□ 1.08
FBXO28-201ENST00000366862 FAM50AQ14320 339 aaKnown RBP21.79■■□□□ 1.08
FBXO28-201ENST00000366862 GLIPR1L2Q4G1C9 344 aa21.75■■□□□ 1.07
FBXO28-201ENST00000366862 EIF5BO60841 1220 aaKnown RBP21.74■■□□□ 1.07
FBXO28-201ENST00000366862 FKBP8Q14318 412 aa21.74■■□□□ 1.07
FBXO28-201ENST00000366862 TRIM52Q96A61 297 aa21.65■■□□□ 1.06
FBXO28-201ENST00000366862 NPM2Q86SE8 214 aaKnown RBP21.56■■□□□ 1.04
FBXO28-201ENST00000366862 SLC4A1APQ9BWU0 796 aaKnown RBP21.55■■□□□ 1.04
FBXO28-201ENST00000366862 ANP32EQ9BTT0 268 aa21.5■■□□□ 1.03
FBXO28-201ENST00000366862 ZBTB47Q9UFB7 747 aaPredicted RBP21.49■■□□□ 1.03
FBXO28-201ENST00000366862 ANP32BQ92688 251 aaKnown RBP21.47■■□□□ 1.03
FBXO28-201ENST00000366862 CANXP27824 592 aaKnown RBP21.45■■□□□ 1.02
FBXO28-201ENST00000366862 NBR1Q14596 966 aa21.41■■□□□ 1.02
FBXO28-201ENST00000366862 HNRNPUQ00839 825 aaKnown RBP eCLIP21.4■■□□□ 1.02
FBXO28-201ENST00000366862 ZNF326Q5BKZ1 582 aaKnown RBP21.37■■□□□ 1.01
FBXO28-201ENST00000366862 MIER1Q8N108 512 aa21.35■■□□□ 1.01
FBXO28-201ENST00000366862 CSRNP3Q8WYN3 585 aa21.34■■□□□ 1.01
FBXO28-201ENST00000366862 DDX10Q13206 875 aaKnown RBP21.29■■□□□ 1
FBXO28-201ENST00000366862 CCDC136Q96JN2 1154 aa21.29■■□□□ 1
FBXO28-201ENST00000366862 UPF2Q9HAU5 1272 aaKnown RBP21.29■■□□□ 1
FBXO28-201ENST00000366862 TONSLQ96HA7 1378 aa21.24■□□□□ 0.99
FBXO28-201ENST00000366862 FAM9BQ8IZU0 186 aa21.18■□□□□ 0.98
FBXO28-201ENST00000366862 CCDC180Q9P1Z9 1646 aa21.17■□□□□ 0.98
FBXO28-201ENST00000366862 HSP90AA1P07900 732 aaKnown RBP21.17■□□□□ 0.98
FBXO28-201ENST00000366862 DDRGK1Q96HY6 314 aa21.12■□□□□ 0.97
FBXO28-201ENST00000366862 NEFMP07197 916 aa21.1■□□□□ 0.97
FBXO28-201ENST00000366862 BCL11AQ9H165 835 aa21.08■□□□□ 0.97
FBXO28-201ENST00000366862 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.08■□□□□ 0.96
FBXO28-201ENST00000366862 MRS2Q9HD23 443 aa21.01■□□□□ 0.95
FBXO28-201ENST00000366862 IRX6P78412 446 aaPredicted RBP21■□□□□ 0.95
FBXO28-201ENST00000366862 TMC1Q8TDI8 760 aa21■□□□□ 0.95
FBXO28-201ENST00000366862 PPM1GO15355 546 aaPredicted RBP20.99■□□□□ 0.95
FBXO28-201ENST00000366862 ERICH6BQ5W0A0 696 aa20.97■□□□□ 0.95
FBXO28-201ENST00000366862 MYO15BQ96JP2 1530 aa20.96■□□□□ 0.95
FBXO28-201ENST00000366862 SUPT16HQ9Y5B9 1047 aaKnown RBP20.96■□□□□ 0.95
FBXO28-201ENST00000366862 BECN1Q14457 450 aa20.94■□□□□ 0.94
FBXO28-201ENST00000366862 ARXQ96QS3 562 aa20.93■□□□□ 0.94
FBXO28-201ENST00000366862 TRIM44Q96DX7 344 aaPredicted RBP20.91■□□□□ 0.94
FBXO28-201ENST00000366862 NOP58Q9Y2X3 529 aaKnown RBP20.89■□□□□ 0.93
FBXO28-201ENST00000366862 P3H3Q8IVL6 736 aa20.87■□□□□ 0.93
FBXO28-201ENST00000366862 TNNT2P45379 298 aaPredicted RBP20.85■□□□□ 0.93
FBXO28-201ENST00000366862 SALL2Q9Y467 1007 aaPredicted RBP20.85■□□□□ 0.93
FBXO28-201ENST00000366862 PPP4R2Q9NY27 417 aa20.85■□□□□ 0.93
FBXO28-201ENST00000366862 WDR43Q15061 677 aaKnown RBP eCLIP20.79■□□□□ 0.92
FBXO28-201ENST00000366862 EIF4G2P78344 907 aaKnown RBP eCLIP20.78■□□□□ 0.92
FBXO28-201ENST00000366862 DEKP35659 375 aaKnown RBP20.77■□□□□ 0.91
FBXO28-201ENST00000366862 GOLGA6L22H0YM25 854 aa20.74■□□□□ 0.91
FBXO28-201ENST00000366862 RTN4Q9NQC3 1192 aaKnown RBP20.74■□□□□ 0.91
FBXO28-201ENST00000366862 ZCCHC6Q5VYS8 1495 aaKnown RBP20.74■□□□□ 0.91
FBXO28-201ENST00000366862 SLC24A1O60721 1099 aa20.73■□□□□ 0.91
FBXO28-201ENST00000366862 NAP1L5Q96NT1 182 aaPredicted RBP20.73■□□□□ 0.91
FBXO28-201ENST00000366862 RBM19Q9Y4C8 960 aaKnown RBP20.71■□□□□ 0.91
FBXO28-201ENST00000366862 CLIP1P30622 1438 aa20.7■□□□□ 0.9
FBXO28-201ENST00000366862 HIRIP3Q9BW71 556 aaPredicted RBP20.69■□□□□ 0.9
FBXO28-201ENST00000366862 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms