RNA–Protein interactions for RNA: ENST00000564365.5

TRAPPC2L-206, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC2L, Length 1,060 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-206ENST00000564365 NISCHQ9Y2I1 1504 aa36.76■■■■□ 3.48
TRAPPC2L-206ENST00000564365 CCDC180Q9P1Z9 1646 aa32.44■■■□□ 2.78
TRAPPC2L-206ENST00000564365 ABCC9O60706 1549 aa31.23■■■□□ 2.59
TRAPPC2L-206ENST00000564365 ZCCHC6Q5VYS8 1495 aaKnown RBP30.73■■■□□ 2.51
TRAPPC2L-206ENST00000564365 DCAF8L2P0C7V8 631 aa30.52■■■□□ 2.48
TRAPPC2L-206ENST00000564365 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
TRAPPC2L-206ENST00000564365 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
TRAPPC2L-206ENST00000564365 NACADO15069 1562 aa30.41■■■□□ 2.46
TRAPPC2L-206ENST00000564365 RB1CC1Q8TDY2 1594 aa30.3■■■□□ 2.44
TRAPPC2L-206ENST00000564365 SCRIBQ14160 1630 aa29.61■■■□□ 2.33
TRAPPC2L-206ENST00000564365 UNC13AQ9UPW8 1703 aa29.55■■■□□ 2.32
TRAPPC2L-206ENST00000564365 SHROOM4Q9ULL8 1493 aa29.33■■■□□ 2.29
TRAPPC2L-206ENST00000564365 BICRAQ9NZM4 1560 aa29.33■■■□□ 2.29
TRAPPC2L-206ENST00000564365 PABPN1Q86U42 306 aaKnown RBP eCLIP29.3■■■□□ 2.28
TRAPPC2L-206ENST00000564365 CECR2Q9BXF3 1484 aa28.55■■■□□ 2.16
TRAPPC2L-206ENST00000564365 EIF4G1Q04637 1599 aaKnown RBP28.53■■■□□ 2.16
TRAPPC2L-206ENST00000564365 BAZ1AQ9NRL2 1556 aaPredicted RBP28.46■■■□□ 2.15
TRAPPC2L-206ENST00000564365 SMARCA4P51532 1647 aa28.4■■■□□ 2.14
TRAPPC2L-206ENST00000564365 DNAJC5BQ9UF47 199 aa28.4■■■□□ 2.14
TRAPPC2L-206ENST00000564365 MROH2BQ7Z745 1585 aa28.32■■■□□ 2.12
TRAPPC2L-206ENST00000564365 CC2D2AQ9P2K1 1620 aa28.28■■■□□ 2.12
TRAPPC2L-206ENST00000564365 RSF1Q96T23 1441 aaPredicted RBP28.21■■■□□ 2.11
TRAPPC2L-206ENST00000564365 SMARCA2P51531 1590 aa28.14■■■□□ 2.1
TRAPPC2L-206ENST00000564365 PEG3Q9GZU2 1588 aa28.14■■■□□ 2.1
TRAPPC2L-206ENST00000564365 ATAD2BQ9ULI0 1458 aa28.14■■■□□ 2.09
TRAPPC2L-206ENST00000564365 NCAPD3P42695 1498 aa28.07■■■□□ 2.08
TRAPPC2L-206ENST00000564365 WIZO95785 1651 aa28.03■■■□□ 2.08
TRAPPC2L-206ENST00000564365 HMGXB3Q12766 1538 aa27.95■■■□□ 2.06
TRAPPC2L-206ENST00000564365 BAZ1BQ9UIG0 1483 aaKnown RBP27.94■■■□□ 2.06
TRAPPC2L-206ENST00000564365 SUPT5HO00267 1087 aaKnown RBP27.89■■■□□ 2.06
TRAPPC2L-206ENST00000564365 TOP2AP11388 1531 aaKnown RBP27.79■■■□□ 2.04
TRAPPC2L-206ENST00000564365 CCDC88BA6NC98 1476 aa27.47■■□□□ 1.99
TRAPPC2L-206ENST00000564365 CADPSQ9ULU8 1353 aa27.28■■□□□ 1.96
TRAPPC2L-206ENST00000564365 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
TRAPPC2L-206ENST00000564365 CFTRP13569 1480 aa27.21■■□□□ 1.95
TRAPPC2L-206ENST00000564365 NESP48681 1621 aa27.17■■□□□ 1.94
TRAPPC2L-206ENST00000564365 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
TRAPPC2L-206ENST00000564365 PRDM2Q13029 1718 aa26.99■■□□□ 1.91
TRAPPC2L-206ENST00000564365 FANCD2Q9BXW9 1451 aa26.93■■□□□ 1.9
TRAPPC2L-206ENST00000564365 ERCC6Q03468 1493 aa26.91■■□□□ 1.9
TRAPPC2L-206ENST00000564365 CEP164Q9UPV0 1460 aa26.86■■□□□ 1.89
TRAPPC2L-206ENST00000564365 KIF21AQ7Z4S6 1674 aa26.84■■□□□ 1.89
TRAPPC2L-206ENST00000564365 MRC2Q9UBG0 1479 aa26.71■■□□□ 1.87
TRAPPC2L-206ENST00000564365 THOC2Q8NI27 1593 aaKnown RBP26.64■■□□□ 1.86
TRAPPC2L-206ENST00000564365 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
TRAPPC2L-206ENST00000564365 URB2Q14146 1524 aaKnown RBP26.61■■□□□ 1.85
TRAPPC2L-206ENST00000564365 WDR62O43379 1518 aa26.6■■□□□ 1.85
TRAPPC2L-206ENST00000564365 WRNQ14191 1432 aaPredicted RBP eCLIP26.59■■□□□ 1.85
TRAPPC2L-206ENST00000564365 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
TRAPPC2L-206ENST00000564365 TOPBP1Q92547 1522 aa26.56■■□□□ 1.84
TRAPPC2L-206ENST00000564365 CUX1P39880 1505 aa26.55■■□□□ 1.84
TRAPPC2L-206ENST00000564365 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
TRAPPC2L-206ENST00000564365 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
TRAPPC2L-206ENST00000564365 CUX2O14529 1486 aa26.45■■□□□ 1.82
TRAPPC2L-206ENST00000564365 BIVM-ERCC5R4GMW8 1640 aa26.44■■□□□ 1.82
TRAPPC2L-206ENST00000564365 DNAJC5Q9H3Z4 198 aa26.39■■□□□ 1.82
TRAPPC2L-206ENST00000564365 FGD5Q6ZNL6 1462 aa26.37■■□□□ 1.81
TRAPPC2L-206ENST00000564365 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
TRAPPC2L-206ENST00000564365 CHIC1Q5VXU3 224 aa26.36■■□□□ 1.81
TRAPPC2L-206ENST00000564365 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
TRAPPC2L-206ENST00000564365 SOGA1O94964 1423 aa26.3■■□□□ 1.8
TRAPPC2L-206ENST00000564365 IFT140Q96RY7 1462 aa26.29■■□□□ 1.8
TRAPPC2L-206ENST00000564365 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
TRAPPC2L-206ENST00000564365 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
TRAPPC2L-206ENST00000564365 ABCA10Q8WWZ4 1543 aa26.17■■□□□ 1.78
TRAPPC2L-206ENST00000564365 WDR97A6NE52 1622 aa26.1■■□□□ 1.77
TRAPPC2L-206ENST00000564365 ZNF608Q9ULD9 1512 aaPredicted RBP26.08■■□□□ 1.77
TRAPPC2L-206ENST00000564365 TDRD9Q8NDG6 1382 aaKnown RBP26.06■■□□□ 1.76
TRAPPC2L-206ENST00000564365 KIF27Q86VH2 1401 aa26.02■■□□□ 1.76
TRAPPC2L-206ENST00000564365 AQRO60306 1485 aaKnown RBP eCLIP26.02■■□□□ 1.767e-7■■■□□ 15.5
TRAPPC2L-206ENST00000564365 GAPVD1Q14C86 1478 aa26■■□□□ 1.75
TRAPPC2L-206ENST00000564365 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
TRAPPC2L-206ENST00000564365 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
TRAPPC2L-206ENST00000564365 GRIN2BQ13224 1484 aa25.92■■□□□ 1.74
TRAPPC2L-206ENST00000564365 EEA1Q15075 1411 aa25.88■■□□□ 1.73
TRAPPC2L-206ENST00000564365 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
TRAPPC2L-206ENST00000564365 ERICH3Q5RHP9 1530 aa25.87■■□□□ 1.73
TRAPPC2L-206ENST00000564365 PBRM1Q86U86 1689 aa25.85■■□□□ 1.73
TRAPPC2L-206ENST00000564365 IGF1RP08069 1367 aa25.84■■□□□ 1.73
TRAPPC2L-206ENST00000564365 MAGI1Q96QZ7 1491 aaPredicted RBP25.8■■□□□ 1.72
TRAPPC2L-206ENST00000564365 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
TRAPPC2L-206ENST00000564365 CSRNP3Q8WYN3 585 aa25.77■■□□□ 1.72
TRAPPC2L-206ENST00000564365 FAM9AQ8IZU1 332 aaPredicted RBP25.75■■□□□ 1.71
TRAPPC2L-206ENST00000564365 FHAD1B1AJZ9 1412 aa25.72■■□□□ 1.71
TRAPPC2L-206ENST00000564365 CUL7Q14999 1698 aa25.71■■□□□ 1.71
TRAPPC2L-206ENST00000564365 CARMIL1Q5VZK9 1371 aa25.7■■□□□ 1.71
TRAPPC2L-206ENST00000564365 ADAMTS12P58397 1594 aa25.7■■□□□ 1.71
TRAPPC2L-206ENST00000564365 SYNJ2O15056 1496 aa25.69■■□□□ 1.7
TRAPPC2L-206ENST00000564365 CHMP7Q8WUX9 453 aaPredicted RBP25.66■■□□□ 1.7
TRAPPC2L-206ENST00000564365 PRXQ9BXM0 1461 aa25.63■■□□□ 1.69
TRAPPC2L-206ENST00000564365 FBLN2P98095 1184 aa25.62■■□□□ 1.69
TRAPPC2L-206ENST00000564365 RAPGEF2Q9Y4G8 1499 aa25.6■■□□□ 1.69
TRAPPC2L-206ENST00000564365 GRIN2AQ12879 1464 aa25.58■■□□□ 1.69
TRAPPC2L-206ENST00000564365 CHD1O14646 1710 aa25.54■■□□□ 1.68
TRAPPC2L-206ENST00000564365 KIF21BO75037 1637 aa25.52■■□□□ 1.68
TRAPPC2L-206ENST00000564365 OSCARQ8IYS5 282 aa25.48■■□□□ 1.67
TRAPPC2L-206ENST00000564365 NUP160Q12769 1436 aa25.46■■□□□ 1.67
TRAPPC2L-206ENST00000564365 GOLGA3Q08378 1498 aa25.43■■□□□ 1.66
TRAPPC2L-206ENST00000564365 CEP170Q5SW79 1584 aa25.39■■□□□ 1.66
TRAPPC2L-206ENST00000564365 KIAA0586Q9BVV6 1533 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms