RNA–Protein interactions for RNA: ENST00000257915.9

TFCP2-201, Transcript of transcription factor CP2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFCP2, Length 3,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2-201ENST00000257915 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
TFCP2-201ENST00000257915 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
TFCP2-201ENST00000257915 SUPT5HO00267 1087 aaKnown RBP24.98■■□□□ 1.59
TFCP2-201ENST00000257915 MYO15BQ96JP2 1530 aa24.46■■□□□ 1.51
TFCP2-201ENST00000257915 ZCCHC6Q5VYS8 1495 aaKnown RBP24.41■■□□□ 1.5
TFCP2-201ENST00000257915 HRCP23327 699 aa24.39■■□□□ 1.5
TFCP2-201ENST00000257915 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
TFCP2-201ENST00000257915 PCGF6Q9BYE7 350 aa24.22■■□□□ 1.47
TFCP2-201ENST00000257915 DCAF8L2P0C7V8 631 aa24.15■■□□□ 1.46
TFCP2-201ENST00000257915 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
TFCP2-201ENST00000257915 PPARGC1BQ86YN6 1023 aaKnown RBP24.06■■□□□ 1.44
TFCP2-201ENST00000257915 LOC105371045A0A1W2PR82 267 aa23.84■■□□□ 1.41
TFCP2-201ENST00000257915 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
TFCP2-201ENST00000257915 TRIM26Q12899 539 aaPredicted RBP23.47■■□□□ 1.35
TFCP2-201ENST00000257915 ABCC9O60706 1549 aa23.13■■□□□ 1.29
TFCP2-201ENST00000257915 FAM9AQ8IZU1 332 aaPredicted RBP23.12■■□□□ 1.29
TFCP2-201ENST00000257915 TRIM41Q8WV44 630 aa23.09■■□□□ 1.29
TFCP2-201ENST00000257915 EHMT2Q96KQ7 1210 aa23.08■■□□□ 1.28
TFCP2-201ENST00000257915 RSF1Q96T23 1441 aaPredicted RBP23.03■■□□□ 1.28
TFCP2-201ENST00000257915 ZEB1P37275 1124 aaPredicted RBP23.03■■□□□ 1.28
TFCP2-201ENST00000257915 SCRIBQ14160 1630 aa22.96■■□□□ 1.27
TFCP2-201ENST00000257915 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
TFCP2-201ENST00000257915 SCAF1Q9H7N4 1312 aaKnown RBP22.88■■□□□ 1.25
TFCP2-201ENST00000257915 PELP1Q8IZL8 1130 aaKnown RBP22.67■■□□□ 1.22
TFCP2-201ENST00000257915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
TFCP2-201ENST00000257915 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
TFCP2-201ENST00000257915 MROH2BQ7Z745 1585 aa22.51■■□□□ 1.19
TFCP2-201ENST00000257915 CCER1Q8TC90 406 aaPredicted RBP22.51■■□□□ 1.19
TFCP2-201ENST00000257915 WIZO95785 1651 aa22.46■■□□□ 1.19
TFCP2-201ENST00000257915 NEUROD1Q13562 356 aa22.43■■□□□ 1.18
TFCP2-201ENST00000257915 TTBK1Q5TCY1 1321 aaPredicted RBP22.42■■□□□ 1.18
TFCP2-201ENST00000257915 ACIN1Q9UKV3 1341 aaKnown RBP22.41■■□□□ 1.18
TFCP2-201ENST00000257915 DIEXFQ68CQ4 756 aaKnown RBP22.31■■□□□ 1.16
TFCP2-201ENST00000257915 GTF3C3Q9Y5Q9 886 aa22.26■■□□□ 1.15
TFCP2-201ENST00000257915 NACADO15069 1562 aa22.21■■□□□ 1.15
TFCP2-201ENST00000257915 EIF4G1Q04637 1599 aaKnown RBP22.2■■□□□ 1.14
TFCP2-201ENST00000257915 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
TFCP2-201ENST00000257915 ABCC8Q09428 1581 aa22.18■■□□□ 1.14
TFCP2-201ENST00000257915 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.14
TFCP2-201ENST00000257915 CENPBP07199 599 aaPredicted RBP22.13■■□□□ 1.13
TFCP2-201ENST00000257915 CEP162Q5TB80 1403 aa22.09■■□□□ 1.13
TFCP2-201ENST00000257915 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
TFCP2-201ENST00000257915 SOGA1O94964 1423 aa22.05■■□□□ 1.12
TFCP2-201ENST00000257915 YTHDC1Q96MU7 727 aaKnown RBP21.97■■□□□ 1.11
TFCP2-201ENST00000257915 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
TFCP2-201ENST00000257915 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
TFCP2-201ENST00000257915 ZNF316A6NFI3 1004 aaPredicted RBP21.96■■□□□ 1.11
TFCP2-201ENST00000257915 TNIKQ9UKE5 1360 aa21.94■■□□□ 1.1
TFCP2-201ENST00000257915 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
TFCP2-201ENST00000257915 CSRNP3Q8WYN3 585 aa21.9■■□□□ 1.1
TFCP2-201ENST00000257915 SMARCA2P51531 1590 aa21.9■■□□□ 1.1
TFCP2-201ENST00000257915 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
TFCP2-201ENST00000257915 HNRNPUL2Q1KMD3 747 aaKnown RBP21.84■■□□□ 1.09
TFCP2-201ENST00000257915 MIER1Q8N108 512 aa21.82■■□□□ 1.08
TFCP2-201ENST00000257915 GOLGA3Q08378 1498 aa21.73■■□□□ 1.07
TFCP2-201ENST00000257915 EEA1Q15075 1411 aa21.73■■□□□ 1.07
TFCP2-201ENST00000257915 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
TFCP2-201ENST00000257915 RANGAP1P46060 587 aaPredicted RBP21.63■■□□□ 1.05
TFCP2-201ENST00000257915 MYT1Q01538 1121 aa21.57■■□□□ 1.04
TFCP2-201ENST00000257915 CLIP1P30622 1438 aa21.57■■□□□ 1.04
TFCP2-201ENST00000257915 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
TFCP2-201ENST00000257915 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
TFCP2-201ENST00000257915 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
TFCP2-201ENST00000257915 APLP2Q06481 763 aa21.5■■□□□ 1.03
TFCP2-201ENST00000257915 VPS8Q8N3P4 1428 aa21.49■■□□□ 1.03
TFCP2-201ENST00000257915 KIF21BO75037 1637 aa21.48■■□□□ 1.03
TFCP2-201ENST00000257915 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.02
TFCP2-201ENST00000257915 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
TFCP2-201ENST00000257915 DHX57Q6P158 1386 aaKnown RBP21.31■■□□□ 1
TFCP2-201ENST00000257915 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
TFCP2-201ENST00000257915 SUPT16HQ9Y5B9 1047 aaKnown RBP21.27■■□□□ 1
TFCP2-201ENST00000257915 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
TFCP2-201ENST00000257915 PEG3Q9GZU2 1588 aa21.27■□□□□ 0.99
TFCP2-201ENST00000257915 CLSPNQ9HAW4 1339 aa21.19■□□□□ 0.98
TFCP2-201ENST00000257915 ATAD2BQ9ULI0 1458 aa21.18■□□□□ 0.98
TFCP2-201ENST00000257915 ARAP1Q96P48 1450 aa21.16■□□□□ 0.98
TFCP2-201ENST00000257915 ITGAEP38570 1179 aa21.13■□□□□ 0.97
TFCP2-201ENST00000257915 TOP2BQ02880 1626 aa21.13■□□□□ 0.97
TFCP2-201ENST00000257915 KCNH8Q96L42 1107 aa21.12■□□□□ 0.97
TFCP2-201ENST00000257915 PRXQ9BXM0 1461 aa21.06■□□□□ 0.96
TFCP2-201ENST00000257915 TSHZ2Q9NRE2 1034 aa21.05■□□□□ 0.96
TFCP2-201ENST00000257915 RRBP1Q9P2E9 1410 aaKnown RBP21.03■□□□□ 0.96
TFCP2-201ENST00000257915 ERICH3Q5RHP9 1530 aa21.03■□□□□ 0.96
TFCP2-201ENST00000257915 BIVM-ERCC5R4GMW8 1640 aa21.01■□□□□ 0.95
TFCP2-201ENST00000257915 CCNB3Q8WWL7 1395 aa20.98■□□□□ 0.95
TFCP2-201ENST00000257915 BCANQ96GW7 911 aa20.96■□□□□ 0.95
TFCP2-201ENST00000257915 CUX2O14529 1486 aa20.93■□□□□ 0.94
TFCP2-201ENST00000257915 RAB3GAP2Q9H2M9 1393 aa20.92■□□□□ 0.94
TFCP2-201ENST00000257915 ARHGAP35Q9NRY4 1499 aa20.9■□□□□ 0.94
TFCP2-201ENST00000257915 CUX1P39880 1505 aa20.89■□□□□ 0.94
TFCP2-201ENST00000257915 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
TFCP2-201ENST00000257915 MAPKBP1O60336 1514 aa20.88■□□□□ 0.93
TFCP2-201ENST00000257915 KIF27Q86VH2 1401 aa20.86■□□□□ 0.93
TFCP2-201ENST00000257915 SIN3AQ96ST3 1273 aa20.86■□□□□ 0.93
TFCP2-201ENST00000257915 FKBP8Q14318 412 aa20.83■□□□□ 0.93
TFCP2-201ENST00000257915 HIRIP3Q9BW71 556 aaPredicted RBP20.83■□□□□ 0.92
TFCP2-201ENST00000257915 ANP32EQ9BTT0 268 aa20.82■□□□□ 0.92
TFCP2-201ENST00000257915 WDR97A6NE52 1622 aa20.81■□□□□ 0.92
TFCP2-201ENST00000257915 FAM50AQ14320 339 aaKnown RBP20.75■□□□□ 0.91
TFCP2-201ENST00000257915 SETD5Q9C0A6 1442 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms