RNA–Protein interactions for RNA: ENST00000383331.4

HCG27-201, Transcript of HLA complex group 27, humanhuman

TSL 1 (best) BASIC

Gene HCG27, Length 1,720 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-201ENST00000383331 NISCHQ9Y2I1 1504 aa33.66■■■□□ 2.98
HCG27-201ENST00000383331 CCDC180Q9P1Z9 1646 aa29.48■■■□□ 2.31
HCG27-201ENST00000383331 ABCC9O60706 1549 aa29.27■■■□□ 2.28
HCG27-201ENST00000383331 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
HCG27-201ENST00000383331 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
HCG27-201ENST00000383331 RB1CC1Q8TDY2 1594 aa27.89■■■□□ 2.06
HCG27-201ENST00000383331 DCAF8L2P0C7V8 631 aa27.73■■■□□ 2.03
HCG27-201ENST00000383331 NACADO15069 1562 aa27.73■■■□□ 2.03
HCG27-201ENST00000383331 MYO15BQ96JP2 1530 aa27.66■■■□□ 2.02
HCG27-201ENST00000383331 DNAJC5BQ9UF47 199 aa27.31■■□□□ 1.96
HCG27-201ENST00000383331 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.96
HCG27-201ENST00000383331 UNC13AQ9UPW8 1703 aa27.25■■□□□ 1.95
HCG27-201ENST00000383331 SHROOM4Q9ULL8 1493 aa27.22■■□□□ 1.95
HCG27-201ENST00000383331 BICRAQ9NZM4 1560 aa27.08■■□□□ 1.92
HCG27-201ENST00000383331 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
HCG27-201ENST00000383331 CC2D2AQ9P2K1 1620 aa26.43■■□□□ 1.82
HCG27-201ENST00000383331 EIF4G1Q04637 1599 aaKnown RBP26.4■■□□□ 1.82
HCG27-201ENST00000383331 CECR2Q9BXF3 1484 aa26.34■■□□□ 1.81
HCG27-201ENST00000383331 SUPT5HO00267 1087 aaKnown RBP26.32■■□□□ 1.8
HCG27-201ENST00000383331 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
HCG27-201ENST00000383331 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
HCG27-201ENST00000383331 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.74
HCG27-201ENST00000383331 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
HCG27-201ENST00000383331 WIZO95785 1651 aa25.73■■□□□ 1.71
HCG27-201ENST00000383331 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
HCG27-201ENST00000383331 NCAPD3P42695 1498 aa25.61■■□□□ 1.69
HCG27-201ENST00000383331 ATAD2BQ9ULI0 1458 aa25.57■■□□□ 1.68
HCG27-201ENST00000383331 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
HCG27-201ENST00000383331 SMARCA2P51531 1590 aa25.51■■□□□ 1.67
HCG27-201ENST00000383331 HMGXB3Q12766 1538 aa25.43■■□□□ 1.66
HCG27-201ENST00000383331 CHIC1Q5VXU3 224 aa25.38■■□□□ 1.65
HCG27-201ENST00000383331 BAZ1BQ9UIG0 1483 aaKnown RBP25.34■■□□□ 1.65
HCG27-201ENST00000383331 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
HCG27-201ENST00000383331 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
HCG27-201ENST00000383331 NESP48681 1621 aa25.19■■□□□ 1.62
HCG27-201ENST00000383331 CUX2O14529 1486 aa25.12■■□□□ 1.61
HCG27-201ENST00000383331 LAMC3Q9Y6N6 1575 aa25■■□□□ 1.59
HCG27-201ENST00000383331 DNAJC5Q9H3Z4 198 aa24.92■■□□□ 1.58
HCG27-201ENST00000383331 THOC2Q8NI27 1593 aaKnown RBP24.87■■□□□ 1.57
HCG27-201ENST00000383331 PDS5BQ9NTI5 1447 aa24.87■■□□□ 1.57
HCG27-201ENST00000383331 CADPSQ9ULU8 1353 aa24.85■■□□□ 1.57
HCG27-201ENST00000383331 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
HCG27-201ENST00000383331 TRIM41Q8WV44 630 aa24.73■■□□□ 1.55
HCG27-201ENST00000383331 CFTRP13569 1480 aa24.71■■□□□ 1.55
HCG27-201ENST00000383331 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
HCG27-201ENST00000383331 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.54
HCG27-201ENST00000383331 ABCC8Q09428 1581 aa24.61■■□□□ 1.53
HCG27-201ENST00000383331 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
HCG27-201ENST00000383331 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
HCG27-201ENST00000383331 WDR62O43379 1518 aa24.57■■□□□ 1.52
HCG27-201ENST00000383331 WRNQ14191 1432 aaPredicted RBP eCLIP24.54■■□□□ 1.52
HCG27-201ENST00000383331 LOC105371045A0A1W2PR82 267 aa24.41■■□□□ 1.5
HCG27-201ENST00000383331 SYNJ1O43426 1573 aa24.41■■□□□ 1.5
HCG27-201ENST00000383331 TOP2BQ02880 1626 aa24.38■■□□□ 1.49
HCG27-201ENST00000383331 BIVM-ERCC5R4GMW8 1640 aa24.37■■□□□ 1.49
HCG27-201ENST00000383331 URB2Q14146 1524 aaKnown RBP24.37■■□□□ 1.49
HCG27-201ENST00000383331 CUX1P39880 1505 aa24.28■■□□□ 1.48
HCG27-201ENST00000383331 FAM9AQ8IZU1 332 aaPredicted RBP24.27■■□□□ 1.48
HCG27-201ENST00000383331 EEA1Q15075 1411 aa24.24■■□□□ 1.47
HCG27-201ENST00000383331 DNMBPQ6XZF7 1577 aa24.14■■□□□ 1.46
HCG27-201ENST00000383331 SOGA1O94964 1423 aa24.13■■□□□ 1.45
HCG27-201ENST00000383331 TOPBP1Q92547 1522 aa24.13■■□□□ 1.45
HCG27-201ENST00000383331 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
HCG27-201ENST00000383331 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
HCG27-201ENST00000383331 FGD5Q6ZNL6 1462 aa24.03■■□□□ 1.44
HCG27-201ENST00000383331 OSCARQ8IYS5 282 aa24.03■■□□□ 1.44
HCG27-201ENST00000383331 RUSC2Q8N2Y8 1516 aa24.02■■□□□ 1.44
HCG27-201ENST00000383331 CSRNP3Q8WYN3 585 aa24■■□□□ 1.43
HCG27-201ENST00000383331 KIF27Q86VH2 1401 aa23.94■■□□□ 1.42
HCG27-201ENST00000383331 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
HCG27-201ENST00000383331 EIF4G3O43432 1585 aaKnown RBP23.92■■□□□ 1.42
HCG27-201ENST00000383331 EHMT2Q96KQ7 1210 aa23.9■■□□□ 1.42
HCG27-201ENST00000383331 KIF21BO75037 1637 aa23.89■■□□□ 1.41
HCG27-201ENST00000383331 TARBP1Q13395 1621 aaKnown RBP23.89■■□□□ 1.41
HCG27-201ENST00000383331 ABCA10Q8WWZ4 1543 aa23.87■■□□□ 1.41
HCG27-201ENST00000383331 AQRO60306 1485 aaKnown RBP eCLIP23.86■■□□□ 1.412e-9■■■■□ 24.7
HCG27-201ENST00000383331 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.41
HCG27-201ENST00000383331 GOLGA3Q08378 1498 aa23.82■■□□□ 1.4
HCG27-201ENST00000383331 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
HCG27-201ENST00000383331 TNIKQ9UKE5 1360 aa23.78■■□□□ 1.4
HCG27-201ENST00000383331 PRXQ9BXM0 1461 aa23.76■■□□□ 1.39
HCG27-201ENST00000383331 ERICH3Q5RHP9 1530 aa23.76■■□□□ 1.39
HCG27-201ENST00000383331 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
HCG27-201ENST00000383331 FBLN2P98095 1184 aa23.71■■□□□ 1.39
HCG27-201ENST00000383331 IGF1RP08069 1367 aa23.7■■□□□ 1.38
HCG27-201ENST00000383331 CHD1O14646 1710 aa23.69■■□□□ 1.38
HCG27-201ENST00000383331 RIMBP3CA6NJZ7 1639 aa23.68■■□□□ 1.38
HCG27-201ENST00000383331 RIMBP3BA6NNM3 1639 aa23.68■■□□□ 1.38
HCG27-201ENST00000383331 RIMBP3Q9UFD9 1639 aa23.68■■□□□ 1.38
HCG27-201ENST00000383331 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
HCG27-201ENST00000383331 RAPGEF2Q9Y4G8 1499 aa23.67■■□□□ 1.38
HCG27-201ENST00000383331 CEP162Q5TB80 1403 aa23.66■■□□□ 1.38
HCG27-201ENST00000383331 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.37
HCG27-201ENST00000383331 ARHGEF11O15085 1522 aa23.64■■□□□ 1.37
HCG27-201ENST00000383331 SNAPC4Q5SXM2 1469 aa23.61■■□□□ 1.37
HCG27-201ENST00000383331 CUL7Q14999 1698 aa23.61■■□□□ 1.37
HCG27-201ENST00000383331 GAPVD1Q14C86 1478 aa23.61■■□□□ 1.37
HCG27-201ENST00000383331 CARMIL1Q5VZK9 1371 aa23.59■■□□□ 1.37
HCG27-201ENST00000383331 GRIN2BQ13224 1484 aa23.56■■□□□ 1.36
HCG27-201ENST00000383331 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms