RNA–Protein interactions for RNA: ENST00000562999.5

NDRG4-217, Transcript of NDRG family member 4, humanhuman

TSL 5 BASIC

Gene NDRG4, Length 2,931 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG4-217ENST00000562999 NISCHQ9Y2I1 1504 aa29.6■■■□□ 2.33
NDRG4-217ENST00000562999 CCDC180Q9P1Z9 1646 aa26.55■■□□□ 1.84
NDRG4-217ENST00000562999 ABCC9O60706 1549 aa25.74■■□□□ 1.71
NDRG4-217ENST00000562999 RB1CC1Q8TDY2 1594 aa24.94■■□□□ 1.58
NDRG4-217ENST00000562999 NACADO15069 1562 aa24.93■■□□□ 1.58
NDRG4-217ENST00000562999 MYO15BQ96JP2 1530 aa24.89■■□□□ 1.58
NDRG4-217ENST00000562999 SHROOM4Q9ULL8 1493 aa24.81■■□□□ 1.56
NDRG4-217ENST00000562999 DCAF1Q9Y4B6 1507 aa24.68■■□□□ 1.54
NDRG4-217ENST00000562999 ZCCHC6Q5VYS8 1495 aaKnown RBP24.66■■□□□ 1.54
NDRG4-217ENST00000562999 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
NDRG4-217ENST00000562999 UNC13AQ9UPW8 1703 aa24.36■■□□□ 1.49
NDRG4-217ENST00000562999 HRCP23327 699 aa24.36■■□□□ 1.49
NDRG4-217ENST00000562999 DCAF8L2P0C7V8 631 aa24.29■■□□□ 1.48
NDRG4-217ENST00000562999 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
NDRG4-217ENST00000562999 BICRAQ9NZM4 1560 aa24.18■■□□□ 1.46
NDRG4-217ENST00000562999 PCGF6Q9BYE7 350 aa23.94■■□□□ 1.42
NDRG4-217ENST00000562999 SCRIBQ14160 1630 aa23.91■■□□□ 1.42
NDRG4-217ENST00000562999 PABPN1Q86U42 306 aaKnown RBP eCLIP23.9■■□□□ 1.42
NDRG4-217ENST00000562999 DNAJC5BQ9UF47 199 aa23.71■■□□□ 1.39
NDRG4-217ENST00000562999 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
NDRG4-217ENST00000562999 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.35
NDRG4-217ENST00000562999 LOC105371045A0A1W2PR82 267 aa23.44■■□□□ 1.34
NDRG4-217ENST00000562999 TRIM26Q12899 539 aaPredicted RBP23.43■■□□□ 1.34
NDRG4-217ENST00000562999 CC2D2AQ9P2K1 1620 aa23.42■■□□□ 1.34
NDRG4-217ENST00000562999 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
NDRG4-217ENST00000562999 ZEB1P37275 1124 aaPredicted RBP23.21■■□□□ 1.31
NDRG4-217ENST00000562999 PELP1Q8IZL8 1130 aaKnown RBP23.05■■□□□ 1.28
NDRG4-217ENST00000562999 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
NDRG4-217ENST00000562999 BAZ1AQ9NRL2 1556 aaPredicted RBP22.98■■□□□ 1.27
NDRG4-217ENST00000562999 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
NDRG4-217ENST00000562999 RSF1Q96T23 1441 aaPredicted RBP22.94■■□□□ 1.26
NDRG4-217ENST00000562999 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
NDRG4-217ENST00000562999 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
NDRG4-217ENST00000562999 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
NDRG4-217ENST00000562999 HMGXB3Q12766 1538 aa22.89■■□□□ 1.26
NDRG4-217ENST00000562999 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
NDRG4-217ENST00000562999 SCAF1Q9H7N4 1312 aaKnown RBP22.73■■□□□ 1.23
NDRG4-217ENST00000562999 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
NDRG4-217ENST00000562999 FAM9AQ8IZU1 332 aaPredicted RBP22.68■■□□□ 1.22
NDRG4-217ENST00000562999 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
NDRG4-217ENST00000562999 WIZO95785 1651 aa22.45■■□□□ 1.18
NDRG4-217ENST00000562999 EHMT2Q96KQ7 1210 aa22.43■■□□□ 1.18
NDRG4-217ENST00000562999 LAMC3Q9Y6N6 1575 aa22.4■■□□□ 1.18
NDRG4-217ENST00000562999 ACIN1Q9UKV3 1341 aaKnown RBP22.38■■□□□ 1.17
NDRG4-217ENST00000562999 CCER1Q8TC90 406 aaPredicted RBP22.34■■□□□ 1.17
NDRG4-217ENST00000562999 TOP2AP11388 1531 aaKnown RBP22.33■■□□□ 1.17
NDRG4-217ENST00000562999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.32■■□□□ 1.16
NDRG4-217ENST00000562999 CUX2O14529 1486 aa22.27■■□□□ 1.16
NDRG4-217ENST00000562999 NEUROD1Q13562 356 aa22.26■■□□□ 1.15
NDRG4-217ENST00000562999 NESP48681 1621 aa22.24■■□□□ 1.15
NDRG4-217ENST00000562999 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
NDRG4-217ENST00000562999 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
NDRG4-217ENST00000562999 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
NDRG4-217ENST00000562999 DIEXFQ68CQ4 756 aaKnown RBP22.2■■□□□ 1.14
NDRG4-217ENST00000562999 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.14
NDRG4-217ENST00000562999 PDS5BQ9NTI5 1447 aa22.16■■□□□ 1.14
NDRG4-217ENST00000562999 THOC2Q8NI27 1593 aaKnown RBP22.15■■□□□ 1.14
NDRG4-217ENST00000562999 GTF3C3Q9Y5Q9 886 aa22.1■■□□□ 1.13
NDRG4-217ENST00000562999 KIF21AQ7Z4S6 1674 aa22.1■■□□□ 1.13
NDRG4-217ENST00000562999 CFTRP13569 1480 aa22.1■■□□□ 1.13
NDRG4-217ENST00000562999 MYT1Q01538 1121 aa22.09■■□□□ 1.13
NDRG4-217ENST00000562999 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
NDRG4-217ENST00000562999 CEP162Q5TB80 1403 aa22.03■■□□□ 1.12
NDRG4-217ENST00000562999 WDR62O43379 1518 aa21.97■■□□□ 1.11
NDRG4-217ENST00000562999 TNIKQ9UKE5 1360 aa21.97■■□□□ 1.11
NDRG4-217ENST00000562999 CCDC88BA6NC98 1476 aa21.96■■□□□ 1.11
NDRG4-217ENST00000562999 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
NDRG4-217ENST00000562999 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
NDRG4-217ENST00000562999 CEP164Q9UPV0 1460 aa21.92■■□□□ 1.1
NDRG4-217ENST00000562999 FANCD2Q9BXW9 1451 aa21.92■■□□□ 1.1
NDRG4-217ENST00000562999 ZNF316A6NFI3 1004 aaPredicted RBP21.92■■□□□ 1.1
NDRG4-217ENST00000562999 EEA1Q15075 1411 aa21.91■■□□□ 1.1
NDRG4-217ENST00000562999 TTBK1Q5TCY1 1321 aaPredicted RBP21.87■■□□□ 1.09
NDRG4-217ENST00000562999 SOGA1O94964 1423 aa21.84■■□□□ 1.09
NDRG4-217ENST00000562999 CSRNP3Q8WYN3 585 aa21.78■■□□□ 1.08
NDRG4-217ENST00000562999 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
NDRG4-217ENST00000562999 UBTFP17480 764 aaKnown RBP21.73■■□□□ 1.07
NDRG4-217ENST00000562999 URB2Q14146 1524 aaKnown RBP21.72■■□□□ 1.07
NDRG4-217ENST00000562999 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
NDRG4-217ENST00000562999 YTHDC1Q96MU7 727 aaKnown RBP21.66■■□□□ 1.06
NDRG4-217ENST00000562999 MIER1Q8N108 512 aa21.62■■□□□ 1.05
NDRG4-217ENST00000562999 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
NDRG4-217ENST00000562999 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
NDRG4-217ENST00000562999 KIF21BO75037 1637 aa21.59■■□□□ 1.05
NDRG4-217ENST00000562999 TOPBP1Q92547 1522 aa21.58■■□□□ 1.05
NDRG4-217ENST00000562999 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
NDRG4-217ENST00000562999 IFT140Q96RY7 1462 aa21.53■■□□□ 1.04
NDRG4-217ENST00000562999 CLIP1P30622 1438 aa21.51■■□□□ 1.03
NDRG4-217ENST00000562999 VPS8Q8N3P4 1428 aa21.5■■□□□ 1.03
NDRG4-217ENST00000562999 WDR97A6NE52 1622 aa21.43■■□□□ 1.02
NDRG4-217ENST00000562999 SYNJ1O43426 1573 aa21.43■■□□□ 1.02
NDRG4-217ENST00000562999 TARBP1Q13395 1621 aaKnown RBP21.42■■□□□ 1.02
NDRG4-217ENST00000562999 CLSPNQ9HAW4 1339 aa21.42■■□□□ 1.02
NDRG4-217ENST00000562999 APLP2Q06481 763 aa21.41■■□□□ 1.02
NDRG4-217ENST00000562999 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
NDRG4-217ENST00000562999 CUX1P39880 1505 aa21.35■■□□□ 1.01
NDRG4-217ENST00000562999 EIF4G3O43432 1585 aaKnown RBP21.32■■□□□ 1
NDRG4-217ENST00000562999 RAPGEF2Q9Y4G8 1499 aa21.3■■□□□ 1
NDRG4-217ENST00000562999 ZNF608Q9ULD9 1512 aaPredicted RBP21.3■■□□□ 1
NDRG4-217ENST00000562999 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms