RNA–Protein interactions for RNA: ENST00000305124.10

GAP43-201, Transcript of growth associated protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAP43, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43-201ENST00000305124 NISCHQ9Y2I1 1504 aa30.94■■■□□ 2.54
GAP43-201ENST00000305124 CCDC180Q9P1Z9 1646 aa27.26■■□□□ 1.96
GAP43-201ENST00000305124 ABCC9O60706 1549 aa26.12■■□□□ 1.77
GAP43-201ENST00000305124 ZCCHC6Q5VYS8 1495 aaKnown RBP25.9■■□□□ 1.74
GAP43-201ENST00000305124 DCAF1Q9Y4B6 1507 aa25.65■■□□□ 1.7
GAP43-201ENST00000305124 MYO15BQ96JP2 1530 aa25.56■■□□□ 1.68
GAP43-201ENST00000305124 DCAF8L2P0C7V8 631 aa25.55■■□□□ 1.68
GAP43-201ENST00000305124 NACADO15069 1562 aa25.5■■□□□ 1.67
GAP43-201ENST00000305124 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.65
GAP43-201ENST00000305124 SCRIBQ14160 1630 aa24.91■■□□□ 1.58
GAP43-201ENST00000305124 UNC13AQ9UPW8 1703 aa24.82■■□□□ 1.56
GAP43-201ENST00000305124 SHROOM4Q9ULL8 1493 aa24.74■■□□□ 1.55
GAP43-201ENST00000305124 BICRAQ9NZM4 1560 aa24.62■■□□□ 1.53
GAP43-201ENST00000305124 PABPN1Q86U42 306 aaKnown RBP eCLIP24.5■■□□□ 1.51
GAP43-201ENST00000305124 HRCP23327 699 aa24.34■■□□□ 1.49
GAP43-201ENST00000305124 SUPT5HO00267 1087 aaKnown RBP24.3■■□□□ 1.48
GAP43-201ENST00000305124 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
GAP43-201ENST00000305124 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
GAP43-201ENST00000305124 BAZ1AQ9NRL2 1556 aaPredicted RBP23.94■■□□□ 1.42
GAP43-201ENST00000305124 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
GAP43-201ENST00000305124 SMARCA4P51532 1647 aa23.89■■□□□ 1.41
GAP43-201ENST00000305124 MROH2BQ7Z745 1585 aa23.85■■□□□ 1.41
GAP43-201ENST00000305124 RSF1Q96T23 1441 aaPredicted RBP23.78■■□□□ 1.4
GAP43-201ENST00000305124 PCGF6Q9BYE7 350 aa23.72■■□□□ 1.39
GAP43-201ENST00000305124 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
GAP43-201ENST00000305124 PEG3Q9GZU2 1588 aa23.67■■□□□ 1.38
GAP43-201ENST00000305124 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
GAP43-201ENST00000305124 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
GAP43-201ENST00000305124 WIZO95785 1651 aa23.61■■□□□ 1.37
GAP43-201ENST00000305124 NCAPD3P42695 1498 aa23.53■■□□□ 1.36
GAP43-201ENST00000305124 DNAJC5BQ9UF47 199 aa23.48■■□□□ 1.35
GAP43-201ENST00000305124 HMGXB3Q12766 1538 aa23.47■■□□□ 1.35
GAP43-201ENST00000305124 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
GAP43-201ENST00000305124 TRIM26Q12899 539 aaPredicted RBP23.43■■□□□ 1.34
GAP43-201ENST00000305124 TOP2AP11388 1531 aaKnown RBP23.41■■□□□ 1.34
GAP43-201ENST00000305124 PPARGC1BQ86YN6 1023 aaKnown RBP23.38■■□□□ 1.33
GAP43-201ENST00000305124 ZEB1P37275 1124 aaPredicted RBP23.34■■□□□ 1.33
GAP43-201ENST00000305124 PELP1Q8IZL8 1130 aaKnown RBP23.24■■□□□ 1.31
GAP43-201ENST00000305124 LOC105371045A0A1W2PR82 267 aa23.2■■□□□ 1.3
GAP43-201ENST00000305124 CCDC88BA6NC98 1476 aa23.12■■□□□ 1.29
GAP43-201ENST00000305124 CADPSQ9ULU8 1353 aa22.86■■□□□ 1.25
GAP43-201ENST00000305124 CFTRP13569 1480 aa22.86■■□□□ 1.25
GAP43-201ENST00000305124 LAMC3Q9Y6N6 1575 aa22.81■■□□□ 1.24
GAP43-201ENST00000305124 TRIM41Q8WV44 630 aa22.78■■□□□ 1.24
GAP43-201ENST00000305124 NESP48681 1621 aa22.78■■□□□ 1.24
GAP43-201ENST00000305124 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
GAP43-201ENST00000305124 PDS5BQ9NTI5 1447 aa22.63■■□□□ 1.21
GAP43-201ENST00000305124 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
GAP43-201ENST00000305124 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
GAP43-201ENST00000305124 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
GAP43-201ENST00000305124 CEP164Q9UPV0 1460 aa22.52■■□□□ 1.2
GAP43-201ENST00000305124 ERCC6Q03468 1493 aa22.47■■□□□ 1.19
GAP43-201ENST00000305124 ABCC8Q09428 1581 aa22.44■■□□□ 1.18
GAP43-201ENST00000305124 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
GAP43-201ENST00000305124 MYT1Q01538 1121 aa22.37■■□□□ 1.17
GAP43-201ENST00000305124 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
GAP43-201ENST00000305124 ACIN1Q9UKV3 1341 aaKnown RBP22.36■■□□□ 1.17
GAP43-201ENST00000305124 FAM9AQ8IZU1 332 aaPredicted RBP22.35■■□□□ 1.17
GAP43-201ENST00000305124 CUX1P39880 1505 aa22.34■■□□□ 1.17
GAP43-201ENST00000305124 URB2Q14146 1524 aaKnown RBP22.34■■□□□ 1.17
GAP43-201ENST00000305124 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.17
GAP43-201ENST00000305124 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.17
GAP43-201ENST00000305124 SYNJ1O43426 1573 aa22.32■■□□□ 1.16
GAP43-201ENST00000305124 TOPBP1Q92547 1522 aa22.31■■□□□ 1.16
GAP43-201ENST00000305124 TOP2BQ02880 1626 aa22.3■■□□□ 1.16
GAP43-201ENST00000305124 WDR62O43379 1518 aa22.29■■□□□ 1.16
GAP43-201ENST00000305124 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
GAP43-201ENST00000305124 CENPBP07199 599 aaPredicted RBP22.23■■□□□ 1.15
GAP43-201ENST00000305124 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.14
GAP43-201ENST00000305124 FGD5Q6ZNL6 1462 aa22.17■■□□□ 1.14
GAP43-201ENST00000305124 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
GAP43-201ENST00000305124 EEA1Q15075 1411 aa22.13■■□□□ 1.13
GAP43-201ENST00000305124 NEUROD1Q13562 356 aa22.12■■□□□ 1.13
GAP43-201ENST00000305124 DIEXFQ68CQ4 756 aaKnown RBP22.11■■□□□ 1.13
GAP43-201ENST00000305124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.1■■□□□ 1.13
GAP43-201ENST00000305124 CUX2O14529 1486 aa22.09■■□□□ 1.13
GAP43-201ENST00000305124 TNIKQ9UKE5 1360 aa22.07■■□□□ 1.12
GAP43-201ENST00000305124 SOGA1O94964 1423 aa22.06■■□□□ 1.12
GAP43-201ENST00000305124 RAD54L2Q9Y4B4 1467 aa22.04■■□□□ 1.12
GAP43-201ENST00000305124 TARBP1Q13395 1621 aaKnown RBP22.03■■□□□ 1.12
GAP43-201ENST00000305124 CEP162Q5TB80 1403 aa22.03■■□□□ 1.12
GAP43-201ENST00000305124 IFT140Q96RY7 1462 aa22.02■■□□□ 1.12
GAP43-201ENST00000305124 ABCA10Q8WWZ4 1543 aa22■■□□□ 1.11
GAP43-201ENST00000305124 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
GAP43-201ENST00000305124 GTF3C3Q9Y5Q9 886 aa21.97■■□□□ 1.11
GAP43-201ENST00000305124 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
GAP43-201ENST00000305124 ZNF316A6NFI3 1004 aaPredicted RBP21.9■■□□□ 1.1
GAP43-201ENST00000305124 KIF27Q86VH2 1401 aa21.88■■□□□ 1.09
GAP43-201ENST00000305124 ZNF608Q9ULD9 1512 aaPredicted RBP21.87■■□□□ 1.09
GAP43-201ENST00000305124 TDRD9Q8NDG6 1382 aaKnown RBP21.87■■□□□ 1.09
GAP43-201ENST00000305124 ABCA5Q8WWZ7 1642 aa21.87■■□□□ 1.09
GAP43-201ENST00000305124 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
GAP43-201ENST00000305124 GOLGA3Q08378 1498 aa21.85■■□□□ 1.09
GAP43-201ENST00000305124 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
GAP43-201ENST00000305124 AQRO60306 1485 aaKnown RBP eCLIP21.82■■□□□ 1.08
GAP43-201ENST00000305124 GAPVD1Q14C86 1478 aa21.82■■□□□ 1.08
GAP43-201ENST00000305124 KIF21BO75037 1637 aa21.79■■□□□ 1.08
GAP43-201ENST00000305124 AEBP2Q6ZN18 517 aaPredicted RBP21.78■■□□□ 1.08
GAP43-201ENST00000305124 CSRNP3Q8WYN3 585 aa21.78■■□□□ 1.08
GAP43-201ENST00000305124 GRIN2BQ13224 1484 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms