Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 RHOQP1-201ENST00000555758 579 ntBASIC13.53□□□□□ -0.24
RTTNQ86VV8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RTTNQ86VV8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTTNQ86VV8 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTTNQ86VV8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 TCAF2P1-201ENST00000291129 2421 ntBASIC13.52□□□□□ -0.24
RTTNQ86VV8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTTNQ86VV8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RTTNQ86VV8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTTNQ86VV8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTTNQ86VV8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTTNQ86VV8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RTTNQ86VV8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RTTNQ86VV8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 AC015910.1-201ENST00000579400 975 ntBASIC13.52□□□□□ -0.24
RTTNQ86VV8 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTTNQ86VV8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTTNQ86VV8 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTTNQ86VV8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.52□□□□□ -0.24
RTTNQ86VV8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTTNQ86VV8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms