RNA–Protein interactions for RNA: ENST00000351933.8

PATZ1-203, Transcript of POZ/BTB and AT hook containing zinc finger 1, humanhuman

TSL 1 (best) BASIC

Gene PATZ1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATZ1-203ENST00000351933 NISCHQ9Y2I1 1504 aa29.07■■■□□ 2.24
PATZ1-203ENST00000351933 HRCP23327 699 aa25.25■■□□□ 1.63
PATZ1-203ENST00000351933 PPARGC1BQ86YN6 1023 aaKnown RBP25.09■■□□□ 1.61
PATZ1-203ENST00000351933 PCGF6Q9BYE7 350 aa24.98■■□□□ 1.59
PATZ1-203ENST00000351933 CCDC180Q9P1Z9 1646 aa24.96■■□□□ 1.59
PATZ1-203ENST00000351933 PELP1Q8IZL8 1130 aaKnown RBP24.88■■□□□ 1.57
PATZ1-203ENST00000351933 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.56
PATZ1-203ENST00000351933 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
PATZ1-203ENST00000351933 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
PATZ1-203ENST00000351933 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
PATZ1-203ENST00000351933 SCAF1Q9H7N4 1312 aaKnown RBP24.2■■□□□ 1.46
PATZ1-203ENST00000351933 MYO15BQ96JP2 1530 aa24.11■■□□□ 1.45
PATZ1-203ENST00000351933 MYT1Q01538 1121 aa23.97■■□□□ 1.43
PATZ1-203ENST00000351933 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
PATZ1-203ENST00000351933 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
PATZ1-203ENST00000351933 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
PATZ1-203ENST00000351933 TRIM26Q12899 539 aaPredicted RBP23.72■■□□□ 1.39
PATZ1-203ENST00000351933 ABCC9O60706 1549 aa23.7■■□□□ 1.38
PATZ1-203ENST00000351933 ZEB1P37275 1124 aaPredicted RBP23.59■■□□□ 1.37
PATZ1-203ENST00000351933 GTF3C3Q9Y5Q9 886 aa23.53■■□□□ 1.36
PATZ1-203ENST00000351933 NEUROD1Q13562 356 aa23.5■■□□□ 1.35
PATZ1-203ENST00000351933 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
PATZ1-203ENST00000351933 SCRIBQ14160 1630 aa23.33■■□□□ 1.33
PATZ1-203ENST00000351933 CENPBP07199 599 aaPredicted RBP23.33■■□□□ 1.33
PATZ1-203ENST00000351933 EHMT2Q96KQ7 1210 aa23.32■■□□□ 1.32
PATZ1-203ENST00000351933 NACADO15069 1562 aa23.25■■□□□ 1.31
PATZ1-203ENST00000351933 YTHDC1Q96MU7 727 aaKnown RBP23.15■■□□□ 1.3
PATZ1-203ENST00000351933 FAM9AQ8IZU1 332 aaPredicted RBP23.07■■□□□ 1.28
PATZ1-203ENST00000351933 DIEXFQ68CQ4 756 aaKnown RBP23.04■■□□□ 1.28
PATZ1-203ENST00000351933 CCER1Q8TC90 406 aaPredicted RBP23.02■■□□□ 1.28
PATZ1-203ENST00000351933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.01■■□□□ 1.27
PATZ1-203ENST00000351933 RB1CC1Q8TDY2 1594 aa23.01■■□□□ 1.27
PATZ1-203ENST00000351933 RSF1Q96T23 1441 aaPredicted RBP22.79■■□□□ 1.24
PATZ1-203ENST00000351933 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
PATZ1-203ENST00000351933 CECR2Q9BXF3 1484 aa22.72■■□□□ 1.23
PATZ1-203ENST00000351933 BCL11AQ9H165 835 aa22.66■■□□□ 1.22
PATZ1-203ENST00000351933 TRIM41Q8WV44 630 aa22.63■■□□□ 1.21
PATZ1-203ENST00000351933 UNC13AQ9UPW8 1703 aa22.58■■□□□ 1.21
PATZ1-203ENST00000351933 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
PATZ1-203ENST00000351933 PABPN1Q86U42 306 aaKnown RBP eCLIP22.57■■□□□ 1.2
PATZ1-203ENST00000351933 WIZO95785 1651 aa22.4■■□□□ 1.18
PATZ1-203ENST00000351933 MIER1Q8N108 512 aa22.38■■□□□ 1.17
PATZ1-203ENST00000351933 BAZ1AQ9NRL2 1556 aaPredicted RBP22.38■■□□□ 1.17
PATZ1-203ENST00000351933 BICRAQ9NZM4 1560 aa22.37■■□□□ 1.17
PATZ1-203ENST00000351933 ZNF316A6NFI3 1004 aaPredicted RBP22.37■■□□□ 1.17
PATZ1-203ENST00000351933 ANP32EQ9BTT0 268 aa22.35■■□□□ 1.17
PATZ1-203ENST00000351933 SMARCA4P51532 1647 aa22.25■■□□□ 1.15
PATZ1-203ENST00000351933 CSRNP3Q8WYN3 585 aa22.24■■□□□ 1.15
PATZ1-203ENST00000351933 BCANQ96GW7 911 aa22.11■■□□□ 1.13
PATZ1-203ENST00000351933 SUPT16HQ9Y5B9 1047 aaKnown RBP22.11■■□□□ 1.13
PATZ1-203ENST00000351933 TSHZ2Q9NRE2 1034 aa22.09■■□□□ 1.13
PATZ1-203ENST00000351933 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
PATZ1-203ENST00000351933 CCDC88BA6NC98 1476 aa21.96■■□□□ 1.11
PATZ1-203ENST00000351933 HNRNPUL2Q1KMD3 747 aaKnown RBP21.95■■□□□ 1.1
PATZ1-203ENST00000351933 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
PATZ1-203ENST00000351933 PRKCSHP14314 528 aaPredicted RBP21.9■■□□□ 1.1
PATZ1-203ENST00000351933 ATAD2BQ9ULI0 1458 aa21.85■■□□□ 1.09
PATZ1-203ENST00000351933 PEG3Q9GZU2 1588 aa21.84■■□□□ 1.09
PATZ1-203ENST00000351933 EIF4G1Q04637 1599 aaKnown RBP21.79■■□□□ 1.08
PATZ1-203ENST00000351933 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.08
PATZ1-203ENST00000351933 ERICH6Q7L0X2 663 aa21.76■■□□□ 1.07
PATZ1-203ENST00000351933 RANGAP1P46060 587 aaPredicted RBP21.74■■□□□ 1.07
PATZ1-203ENST00000351933 ABCC8Q09428 1581 aa21.7■■□□□ 1.07
PATZ1-203ENST00000351933 FKBP8Q14318 412 aa21.7■■□□□ 1.07
PATZ1-203ENST00000351933 CLSPNQ9HAW4 1339 aa21.7■■□□□ 1.06
PATZ1-203ENST00000351933 ITGAEP38570 1179 aa21.66■■□□□ 1.06
PATZ1-203ENST00000351933 RBM19Q9Y4C8 960 aaKnown RBP21.62■■□□□ 1.05
PATZ1-203ENST00000351933 UBTFP17480 764 aaKnown RBP21.62■■□□□ 1.05
PATZ1-203ENST00000351933 NEFLP07196 543 aa21.6■■□□□ 1.05
PATZ1-203ENST00000351933 NCAPD3P42695 1498 aa21.53■■□□□ 1.04
PATZ1-203ENST00000351933 KCNH8Q96L42 1107 aa21.49■■□□□ 1.03
PATZ1-203ENST00000351933 HMGXB3Q12766 1538 aa21.45■■□□□ 1.03
PATZ1-203ENST00000351933 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.02
PATZ1-203ENST00000351933 SOGA1O94964 1423 aa21.4■■□□□ 1.02
PATZ1-203ENST00000351933 APLP2Q06481 763 aa21.4■■□□□ 1.02
PATZ1-203ENST00000351933 MSH5O43196 834 aa21.35■■□□□ 1.01
PATZ1-203ENST00000351933 CEP162Q5TB80 1403 aa21.35■■□□□ 1.01
PATZ1-203ENST00000351933 ANO8Q9HCE9 1232 aaPredicted RBP21.34■■□□□ 1.01
PATZ1-203ENST00000351933 TRIM52Q96A61 297 aa21.33■■□□□ 1
PATZ1-203ENST00000351933 RUSC2Q8N2Y8 1516 aa21.32■■□□□ 1
PATZ1-203ENST00000351933 SYNJ1O43426 1573 aa21.32■■□□□ 1
PATZ1-203ENST00000351933 CC2D2AQ9P2K1 1620 aa21.3■■□□□ 1
PATZ1-203ENST00000351933 DEKP35659 375 aaKnown RBP21.29■■□□□ 1
PATZ1-203ENST00000351933 NBR1Q14596 966 aa21.25■□□□□ 0.99
PATZ1-203ENST00000351933 IRX6P78412 446 aaPredicted RBP21.24■□□□□ 0.99
PATZ1-203ENST00000351933 CDK11AQ9UQ88 783 aaPredicted RBP21.21■□□□□ 0.99
PATZ1-203ENST00000351933 DDX10Q13206 875 aaKnown RBP21.19■□□□□ 0.98
PATZ1-203ENST00000351933 CFTRP13569 1480 aa21.19■□□□□ 0.98
PATZ1-203ENST00000351933 CCDC136Q96JN2 1154 aa21.18■□□□□ 0.98
PATZ1-203ENST00000351933 EEA1Q15075 1411 aa21.18■□□□□ 0.98
PATZ1-203ENST00000351933 RTN4Q9NQC3 1192 aaKnown RBP21.12■□□□□ 0.97
PATZ1-203ENST00000351933 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
PATZ1-203ENST00000351933 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
PATZ1-203ENST00000351933 SALL2Q9Y467 1007 aaPredicted RBP21.08■□□□□ 0.96
PATZ1-203ENST00000351933 HIRIP3Q9BW71 556 aaPredicted RBP21.06■□□□□ 0.96
PATZ1-203ENST00000351933 TNIKQ9UKE5 1360 aa21.06■□□□□ 0.96
PATZ1-203ENST00000351933 CUX1P39880 1505 aa21.05■□□□□ 0.96
PATZ1-203ENST00000351933 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.02■□□□□ 0.96
PATZ1-203ENST00000351933 BIVM-ERCC5R4GMW8 1640 aa21.02■□□□□ 0.96
PATZ1-203ENST00000351933 GOLGA3Q08378 1498 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms