Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC29.64■■■□□ 2.33
RTTNQ86VV8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RTTNQ86VV8 AL356512.1-201ENST00000607453 1739 ntBASIC29.06■■■□□ 2.24
RTTNQ86VV8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
RTTNQ86VV8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTTNQ86VV8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RTTNQ86VV8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.47■■■□□ 2.15
RTTNQ86VV8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.41■■■□□ 2.14
RTTNQ86VV8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.4■■■□□ 2.14
RTTNQ86VV8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.27■■■□□ 2.12
RTTNQ86VV8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.23■■■□□ 2.11
RTTNQ86VV8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.05■■■□□ 2.08
RTTNQ86VV8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC27.93■■■□□ 2.06
RTTNQ86VV8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
RTTNQ86VV8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
RTTNQ86VV8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RTTNQ86VV8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
RTTNQ86VV8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RTTNQ86VV8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC27.33■■□□□ 1.97
RTTNQ86VV8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.31■■□□□ 1.96
RTTNQ86VV8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
RTTNQ86VV8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.22■■□□□ 1.95
RTTNQ86VV8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
RTTNQ86VV8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RTTNQ86VV8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RTTNQ86VV8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
RTTNQ86VV8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.06■■□□□ 1.92
RTTNQ86VV8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
RTTNQ86VV8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.03■■□□□ 1.92
RTTNQ86VV8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTTNQ86VV8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RTTNQ86VV8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RTTNQ86VV8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.78■■□□□ 1.88
RTTNQ86VV8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTTNQ86VV8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTTNQ86VV8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
RTTNQ86VV8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
RTTNQ86VV8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RTTNQ86VV8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTTNQ86VV8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.58■■□□□ 1.85
RTTNQ86VV8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTTNQ86VV8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTTNQ86VV8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.48■■□□□ 1.83
RTTNQ86VV8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
RTTNQ86VV8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RTTNQ86VV8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTTNQ86VV8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RTTNQ86VV8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTTNQ86VV8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.34■■□□□ 1.81
RTTNQ86VV8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTTNQ86VV8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
RTTNQ86VV8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.27■■□□□ 1.8
RTTNQ86VV8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
RTTNQ86VV8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC26.22■■□□□ 1.79
RTTNQ86VV8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTTNQ86VV8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
RTTNQ86VV8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTTNQ86VV8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
RTTNQ86VV8 AC015813.7-201ENST00000623294 581 ntBASIC26.01■■□□□ 1.75
RTTNQ86VV8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTTNQ86VV8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTTNQ86VV8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTTNQ86VV8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTTNQ86VV8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
RTTNQ86VV8 ZNRF2P1-201ENST00000441407 443 ntBASIC25.8■■□□□ 1.72
RTTNQ86VV8 AC006077.2-201ENST00000623591 457 ntBASIC25.8■■□□□ 1.72
RTTNQ86VV8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.74■■□□□ 1.71
RTTNQ86VV8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTTNQ86VV8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RTTNQ86VV8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC25.72■■□□□ 1.71
RTTNQ86VV8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RTTNQ86VV8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RTTNQ86VV8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.7■■□□□ 1.71
RTTNQ86VV8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RTTNQ86VV8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTTNQ86VV8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC25.68■■□□□ 1.7
RTTNQ86VV8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.67■■□□□ 1.7
RTTNQ86VV8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC25.65■■□□□ 1.7
RTTNQ86VV8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RTTNQ86VV8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.61■■□□□ 1.69
RTTNQ86VV8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTTNQ86VV8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
RTTNQ86VV8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTTNQ86VV8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTTNQ86VV8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RTTNQ86VV8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTTNQ86VV8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
RTTNQ86VV8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RTTNQ86VV8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.42■■□□□ 1.66
RTTNQ86VV8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
RTTNQ86VV8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTTNQ86VV8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RTTNQ86VV8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.36■■□□□ 1.65
RTTNQ86VV8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RTTNQ86VV8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTTNQ86VV8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTTNQ86VV8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
RTTNQ86VV8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
RTTNQ86VV8 AP002365.1-201ENST00000603448 772 ntBASIC25.26■■□□□ 1.63
RTTNQ86VV8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms