RNA–Protein interactions for RNA: ENST00000307808.10

AFF1-201, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFF1, Length 9,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-201ENST00000307808 PELP1Q8IZL8 1130 aaKnown RBP21.8■■□□□ 1.08
AFF1-201ENST00000307808 DCAF8L2P0C7V8 631 aa21.23■□□□□ 0.99
AFF1-201ENST00000307808 CCER1Q8TC90 406 aaPredicted RBP20.7■□□□□ 0.91
AFF1-201ENST00000307808 MYT1Q01538 1121 aa20.67■□□□□ 0.9
AFF1-201ENST00000307808 ERICH6Q7L0X2 663 aa20.56■□□□□ 0.88
AFF1-201ENST00000307808 APLP2Q06481 763 aa20.38■□□□□ 0.85
AFF1-201ENST00000307808 FAM9AQ8IZU1 332 aaPredicted RBP20.31■□□□□ 0.84
AFF1-201ENST00000307808 SUPT5HO00267 1087 aaKnown RBP20.28■□□□□ 0.84
AFF1-201ENST00000307808 CENPBP07199 599 aaPredicted RBP20.27■□□□□ 0.83
AFF1-201ENST00000307808 YTHDC1Q96MU7 727 aaKnown RBP20.04■□□□□ 0.8
AFF1-201ENST00000307808 ZEB1P37275 1124 aaPredicted RBP19.98■□□□□ 0.79
AFF1-201ENST00000307808 NEFLP07196 543 aa19.93■□□□□ 0.78
AFF1-201ENST00000307808 NISCHQ9Y2I1 1504 aa19.77■□□□□ 0.76
AFF1-201ENST00000307808 EHMT2Q96KQ7 1210 aa19.71■□□□□ 0.75
AFF1-201ENST00000307808 DAXXQ9UER7 740 aaPredicted RBP19.69■□□□□ 0.74
AFF1-201ENST00000307808 SHROOM4Q9ULL8 1493 aa19.66■□□□□ 0.74
AFF1-201ENST00000307808 PCGF6Q9BYE7 350 aa19.52■□□□□ 0.72
AFF1-201ENST00000307808 TTBK1Q5TCY1 1321 aaPredicted RBP19.44■□□□□ 0.7
AFF1-201ENST00000307808 RTL5Q5HYW3 569 aaPredicted RBP19.17■□□□□ 0.66
AFF1-201ENST00000307808 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.65
AFF1-201ENST00000307808 ATP1B4Q9UN42 357 aaPredicted RBP19.1■□□□□ 0.65
AFF1-201ENST00000307808 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
AFF1-201ENST00000307808 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
AFF1-201ENST00000307808 RANGAP1P46060 587 aaPredicted RBP18.92■□□□□ 0.62
AFF1-201ENST00000307808 CLSPNQ9HAW4 1339 aa18.83■□□□□ 0.6
AFF1-201ENST00000307808 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
AFF1-201ENST00000307808 POLR3GLQ9BT43 218 aa18.6■□□□□ 0.57
AFF1-201ENST00000307808 ZBTB47Q9UFB7 747 aaPredicted RBP18.57■□□□□ 0.56
AFF1-201ENST00000307808 MYT1LQ9UL68 1186 aa18.56■□□□□ 0.56
AFF1-201ENST00000307808 HRCP23327 699 aa18.55■□□□□ 0.56
AFF1-201ENST00000307808 GLIPR1L2Q4G1C9 344 aa18.55■□□□□ 0.56
AFF1-201ENST00000307808 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
AFF1-201ENST00000307808 ANP32BQ92688 251 aaKnown RBP18.45■□□□□ 0.54
AFF1-201ENST00000307808 CDK11AQ9UQ88 783 aaPredicted RBP18.43■□□□□ 0.54
AFF1-201ENST00000307808 DIEXFQ68CQ4 756 aaKnown RBP18.36■□□□□ 0.53
AFF1-201ENST00000307808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.36■□□□□ 0.53
AFF1-201ENST00000307808 HNRNPUL2Q1KMD3 747 aaKnown RBP18.36■□□□□ 0.53
AFF1-201ENST00000307808 ANP32AP39687 249 aaKnown RBP18.31■□□□□ 0.52
AFF1-201ENST00000307808 ITGAEP38570 1179 aa18.3■□□□□ 0.52
AFF1-201ENST00000307808 NEFMP07197 916 aa18.26■□□□□ 0.51
AFF1-201ENST00000307808 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
AFF1-201ENST00000307808 PPARGC1BQ86YN6 1023 aaKnown RBP18.18■□□□□ 0.5
AFF1-201ENST00000307808 ANP32CO43423 234 aa18.18■□□□□ 0.5
AFF1-201ENST00000307808 CNGB1Q14028 1251 aaPredicted RBP18.17■□□□□ 0.5
AFF1-201ENST00000307808 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
AFF1-201ENST00000307808 HSP90AA1P07900 732 aaKnown RBP18.1■□□□□ 0.49
AFF1-201ENST00000307808 UPF2Q9HAU5 1272 aaKnown RBP18.09■□□□□ 0.49
AFF1-201ENST00000307808 EIF5BO60841 1220 aaKnown RBP18.08■□□□□ 0.48
AFF1-201ENST00000307808 SLC24A1O60721 1099 aa17.97■□□□□ 0.47
AFF1-201ENST00000307808 GTF3C3Q9Y5Q9 886 aa17.96■□□□□ 0.47
AFF1-201ENST00000307808 FAM50AQ14320 339 aaKnown RBP17.94■□□□□ 0.46
AFF1-201ENST00000307808 CDK11BP21127 795 aaKnown RBP17.91■□□□□ 0.46
AFF1-201ENST00000307808 TRIM52Q96A61 297 aa17.89■□□□□ 0.46
AFF1-201ENST00000307808 BCANQ96GW7 911 aa17.88■□□□□ 0.45
AFF1-201ENST00000307808 TNNT2P45379 298 aaPredicted RBP17.87■□□□□ 0.45
AFF1-201ENST00000307808 NEUROD1Q13562 356 aa17.78■□□□□ 0.44
AFF1-201ENST00000307808 ANP32EQ9BTT0 268 aa17.76■□□□□ 0.43
AFF1-201ENST00000307808 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
AFF1-201ENST00000307808 NPM2Q86SE8 214 aaKnown RBP17.74■□□□□ 0.43
AFF1-201ENST00000307808 ZNF326Q5BKZ1 582 aaKnown RBP17.73■□□□□ 0.43
AFF1-201ENST00000307808 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
AFF1-201ENST00000307808 LOC105371045A0A1W2PR82 267 aa17.63■□□□□ 0.41
AFF1-201ENST00000307808 TRIM44Q96DX7 344 aaPredicted RBP17.63■□□□□ 0.41
AFF1-201ENST00000307808 ACIN1Q9UKV3 1341 aaKnown RBP17.63■□□□□ 0.41
AFF1-201ENST00000307808 MYH16Q9H6N6 1097 aa17.58■□□□□ 0.41
AFF1-201ENST00000307808 BECN1Q14457 450 aa17.58■□□□□ 0.4
AFF1-201ENST00000307808 GOLGA6L22H0YM25 854 aa17.55■□□□□ 0.4
AFF1-201ENST00000307808 NCLP19338 710 aaKnown RBP17.53■□□□□ 0.4
AFF1-201ENST00000307808 DDRGK1Q96HY6 314 aa17.53■□□□□ 0.4
AFF1-201ENST00000307808 ZRSR1Q15695 479 aaKnown RBP17.5■□□□□ 0.39
AFF1-201ENST00000307808 NBR1Q14596 966 aa17.49■□□□□ 0.39
AFF1-201ENST00000307808 CCDC136Q96JN2 1154 aa17.48■□□□□ 0.39
AFF1-201ENST00000307808 TONSLQ96HA7 1378 aa17.48■□□□□ 0.39
AFF1-201ENST00000307808 FKBP8Q14318 412 aa17.45■□□□□ 0.38
AFF1-201ENST00000307808 ESF1Q9H501 851 aaKnown RBP17.42■□□□□ 0.38
AFF1-201ENST00000307808 GOLGA6L6A8MZA4 724 aa17.41■□□□□ 0.38
AFF1-201ENST00000307808 ERICH6BQ5W0A0 696 aa17.39■□□□□ 0.37
AFF1-201ENST00000307808 CASC1Q6TDU7 716 aa17.39■□□□□ 0.37
AFF1-201ENST00000307808 HNRNPUQ00839 825 aaKnown RBP eCLIP17.38■□□□□ 0.37
AFF1-201ENST00000307808 ARXQ96QS3 562 aa17.38■□□□□ 0.37
AFF1-201ENST00000307808 DNTTIP2Q5QJE6 756 aaKnown RBP17.35■□□□□ 0.37
AFF1-201ENST00000307808 WDR43Q15061 677 aaKnown RBP eCLIP17.35■□□□□ 0.37
AFF1-201ENST00000307808 PTMAP06454 111 aaKnown RBP17.34■□□□□ 0.37
AFF1-201ENST00000307808 NRDCO43847 1150 aa17.34■□□□□ 0.37
AFF1-201ENST00000307808 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
AFF1-201ENST00000307808 CHAF1AQ13111 956 aaPredicted RBP17.3■□□□□ 0.36
AFF1-201ENST00000307808 STAG3Q9UJ98 1225 aa17.29■□□□□ 0.36
AFF1-201ENST00000307808 L1TD1Q5T7N2 865 aaKnown RBP17.25■□□□□ 0.35
AFF1-201ENST00000307808 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
AFF1-201ENST00000307808 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.35
AFF1-201ENST00000307808 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.35
AFF1-201ENST00000307808 KAT6BQ8WYB5 2073 aa17.18■□□□□ 0.34
AFF1-201ENST00000307808 FBLN2P98095 1184 aa17.16■□□□□ 0.34
AFF1-201ENST00000307808 NAP1L5Q96NT1 182 aaPredicted RBP17.16■□□□□ 0.34
AFF1-201ENST00000307808 PPM1GO15355 546 aaPredicted RBP17.16■□□□□ 0.34
AFF1-201ENST00000307808 CHMP4BQ9H444 224 aaKnown RBP17.12■□□□□ 0.33
AFF1-201ENST00000307808 ZNF777Q9ULD5 760 aaPredicted RBP17.09■□□□□ 0.33
AFF1-201ENST00000307808 MRS2Q9HD23 443 aa17.08■□□□□ 0.32
AFF1-201ENST00000307808 FTSJ3Q8IY81 847 aaKnown RBP17.07■□□□□ 0.32
AFF1-201ENST00000307808 MSNP26038 577 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms