RNA–Protein interactions for RNA: ENST00000393349.2

NCK2-203, Transcript of NCK adaptor protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK2, Length 2,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2-203ENST00000393349 NISCHQ9Y2I1 1504 aa33.24■■■□□ 2.91
NCK2-203ENST00000393349 CCDC180Q9P1Z9 1646 aa29.33■■■□□ 2.29
NCK2-203ENST00000393349 ABCC9O60706 1549 aa28.51■■■□□ 2.15
NCK2-203ENST00000393349 DCAF8L2P0C7V8 631 aa27.85■■■□□ 2.05
NCK2-203ENST00000393349 ZCCHC6Q5VYS8 1495 aaKnown RBP27.77■■■□□ 2.04
NCK2-203ENST00000393349 NACADO15069 1562 aa27.49■■□□□ 1.99
NCK2-203ENST00000393349 RB1CC1Q8TDY2 1594 aa27.47■■□□□ 1.99
NCK2-203ENST00000393349 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
NCK2-203ENST00000393349 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
NCK2-203ENST00000393349 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
NCK2-203ENST00000393349 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
NCK2-203ENST00000393349 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.89
NCK2-203ENST00000393349 PABPN1Q86U42 306 aaKnown RBP eCLIP26.74■■□□□ 1.87
NCK2-203ENST00000393349 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
NCK2-203ENST00000393349 SUPT5HO00267 1087 aaKnown RBP26.37■■□□□ 1.81
NCK2-203ENST00000393349 CECR2Q9BXF3 1484 aa25.93■■□□□ 1.74
NCK2-203ENST00000393349 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
NCK2-203ENST00000393349 DNAJC5BQ9UF47 199 aa25.79■■□□□ 1.72
NCK2-203ENST00000393349 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
NCK2-203ENST00000393349 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
NCK2-203ENST00000393349 BAZ1AQ9NRL2 1556 aaPredicted RBP25.73■■□□□ 1.71
NCK2-203ENST00000393349 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
NCK2-203ENST00000393349 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
NCK2-203ENST00000393349 RSF1Q96T23 1441 aaPredicted RBP25.5■■□□□ 1.67
NCK2-203ENST00000393349 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
NCK2-203ENST00000393349 WIZO95785 1651 aa25.46■■□□□ 1.67
NCK2-203ENST00000393349 SMARCA2P51531 1590 aa25.45■■□□□ 1.66
NCK2-203ENST00000393349 HRCP23327 699 aa25.44■■□□□ 1.66
NCK2-203ENST00000393349 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
NCK2-203ENST00000393349 NCAPD3P42695 1498 aa25.36■■□□□ 1.65
NCK2-203ENST00000393349 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.65
NCK2-203ENST00000393349 HMGXB3Q12766 1538 aa25.28■■□□□ 1.64
NCK2-203ENST00000393349 PCGF6Q9BYE7 350 aa25.26■■□□□ 1.63
NCK2-203ENST00000393349 TOP2AP11388 1531 aaKnown RBP25.13■■□□□ 1.61
NCK2-203ENST00000393349 LOC105371045A0A1W2PR82 267 aa24.96■■□□□ 1.59
NCK2-203ENST00000393349 PPARGC1BQ86YN6 1023 aaKnown RBP24.89■■□□□ 1.58
NCK2-203ENST00000393349 CCDC88BA6NC98 1476 aa24.87■■□□□ 1.57
NCK2-203ENST00000393349 NESP48681 1621 aa24.78■■□□□ 1.56
NCK2-203ENST00000393349 CADPSQ9ULU8 1353 aa24.69■■□□□ 1.54
NCK2-203ENST00000393349 TRIM26Q12899 539 aaPredicted RBP24.66■■□□□ 1.54
NCK2-203ENST00000393349 LAMC3Q9Y6N6 1575 aa24.65■■□□□ 1.54
NCK2-203ENST00000393349 CFTRP13569 1480 aa24.6■■□□□ 1.53
NCK2-203ENST00000393349 ERCC6Q03468 1493 aa24.53■■□□□ 1.52
NCK2-203ENST00000393349 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
NCK2-203ENST00000393349 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
NCK2-203ENST00000393349 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
NCK2-203ENST00000393349 PRDM2Q13029 1718 aa24.46■■□□□ 1.51
NCK2-203ENST00000393349 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
NCK2-203ENST00000393349 FAM9AQ8IZU1 332 aaPredicted RBP24.42■■□□□ 1.5
NCK2-203ENST00000393349 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
NCK2-203ENST00000393349 EHMT2Q96KQ7 1210 aa24.34■■□□□ 1.49
NCK2-203ENST00000393349 ZEB1P37275 1124 aaPredicted RBP24.26■■□□□ 1.47
NCK2-203ENST00000393349 MRC2Q9UBG0 1479 aa24.24■■□□□ 1.47
NCK2-203ENST00000393349 THOC2Q8NI27 1593 aaKnown RBP24.24■■□□□ 1.47
NCK2-203ENST00000393349 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
NCK2-203ENST00000393349 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
NCK2-203ENST00000393349 WDR62O43379 1518 aa24.12■■□□□ 1.45
NCK2-203ENST00000393349 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
NCK2-203ENST00000393349 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
NCK2-203ENST00000393349 CUX1P39880 1505 aa24.06■■□□□ 1.44
NCK2-203ENST00000393349 WRNQ14191 1432 aaPredicted RBP eCLIP24.05■■□□□ 1.44
NCK2-203ENST00000393349 CUX2O14529 1486 aa24■■□□□ 1.43
NCK2-203ENST00000393349 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
NCK2-203ENST00000393349 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
NCK2-203ENST00000393349 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
NCK2-203ENST00000393349 POLA1P09884 1462 aaPredicted RBP23.92■■□□□ 1.42
NCK2-203ENST00000393349 BIVM-ERCC5R4GMW8 1640 aa23.91■■□□□ 1.42
NCK2-203ENST00000393349 RAD54L2Q9Y4B4 1467 aa23.86■■□□□ 1.41
NCK2-203ENST00000393349 SOGA1O94964 1423 aa23.83■■□□□ 1.41
NCK2-203ENST00000393349 IFT140Q96RY7 1462 aa23.8■■□□□ 1.4
NCK2-203ENST00000393349 TARBP1Q13395 1621 aaKnown RBP23.77■■□□□ 1.4
NCK2-203ENST00000393349 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
NCK2-203ENST00000393349 TDRD9Q8NDG6 1382 aaKnown RBP23.7■■□□□ 1.38
NCK2-203ENST00000393349 WDR97A6NE52 1622 aa23.67■■□□□ 1.38
NCK2-203ENST00000393349 AQRO60306 1485 aaKnown RBP eCLIP23.67■■□□□ 1.38
NCK2-203ENST00000393349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.66■■□□□ 1.38
NCK2-203ENST00000393349 ABCA10Q8WWZ4 1543 aa23.66■■□□□ 1.38
NCK2-203ENST00000393349 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
NCK2-203ENST00000393349 SCAF1Q9H7N4 1312 aaKnown RBP23.64■■□□□ 1.38
NCK2-203ENST00000393349 CCER1Q8TC90 406 aaPredicted RBP23.64■■□□□ 1.37
NCK2-203ENST00000393349 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
NCK2-203ENST00000393349 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
NCK2-203ENST00000393349 TTBK1Q5TCY1 1321 aaPredicted RBP23.53■■□□□ 1.36
NCK2-203ENST00000393349 PELP1Q8IZL8 1130 aaKnown RBP23.52■■□□□ 1.36
NCK2-203ENST00000393349 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
NCK2-203ENST00000393349 PBRM1Q86U86 1689 aa23.5■■□□□ 1.35
NCK2-203ENST00000393349 RUSC2Q8N2Y8 1516 aa23.49■■□□□ 1.35
NCK2-203ENST00000393349 GRIN2BQ13224 1484 aa23.48■■□□□ 1.35
NCK2-203ENST00000393349 CEP162Q5TB80 1403 aa23.45■■□□□ 1.34
NCK2-203ENST00000393349 SNAPC4Q5SXM2 1469 aa23.45■■□□□ 1.34
NCK2-203ENST00000393349 FBLN2P98095 1184 aa23.4■■□□□ 1.34
NCK2-203ENST00000393349 ERICH3Q5RHP9 1530 aa23.37■■□□□ 1.33
NCK2-203ENST00000393349 MAGI1Q96QZ7 1491 aaPredicted RBP23.35■■□□□ 1.33
NCK2-203ENST00000393349 IGF1RP08069 1367 aa23.35■■□□□ 1.33
NCK2-203ENST00000393349 TNIKQ9UKE5 1360 aa23.35■■□□□ 1.33
NCK2-203ENST00000393349 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
NCK2-203ENST00000393349 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.32
NCK2-203ENST00000393349 DIEXFQ68CQ4 756 aaKnown RBP23.32■■□□□ 1.32
NCK2-203ENST00000393349 ACIN1Q9UKV3 1341 aaKnown RBP23.31■■□□□ 1.32
NCK2-203ENST00000393349 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms