RNA–Protein interactions for RNA: ENST00000355123.8

ITSN2-201, Transcript of intersectin 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ITSN2, Length 6,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-201ENST00000355123 DCAF8L2P0C7V8 631 aa29.29■■■□□ 2.28
ITSN2-201ENST00000355123 SUPT5HO00267 1087 aaKnown RBP27.83■■■□□ 2.05
ITSN2-201ENST00000355123 EHMT2Q96KQ7 1210 aa27.61■■■□□ 2.01
ITSN2-201ENST00000355123 SHROOM4Q9ULL8 1493 aa27.32■■□□□ 1.96
ITSN2-201ENST00000355123 PELP1Q8IZL8 1130 aaKnown RBP27.06■■□□□ 1.92
ITSN2-201ENST00000355123 TTBK1Q5TCY1 1321 aaPredicted RBP26.67■■□□□ 1.86
ITSN2-201ENST00000355123 NISCHQ9Y2I1 1504 aa26.49■■□□□ 1.83
ITSN2-201ENST00000355123 ERICH6Q7L0X2 663 aa26.46■■□□□ 1.83
ITSN2-201ENST00000355123 FAM9AQ8IZU1 332 aaPredicted RBP26.45■■□□□ 1.82
ITSN2-201ENST00000355123 APLP2Q06481 763 aa26.42■■□□□ 1.82
ITSN2-201ENST00000355123 PCGF6Q9BYE7 350 aa26.22■■□□□ 1.79
ITSN2-201ENST00000355123 RANGAP1P46060 587 aaPredicted RBP26.2■■□□□ 1.78
ITSN2-201ENST00000355123 CENPBP07199 599 aaPredicted RBP25.9■■□□□ 1.74
ITSN2-201ENST00000355123 YTHDC1Q96MU7 727 aaKnown RBP25.88■■□□□ 1.73
ITSN2-201ENST00000355123 CCER1Q8TC90 406 aaPredicted RBP25.85■■□□□ 1.73
ITSN2-201ENST00000355123 MYT1Q01538 1121 aa25.85■■□□□ 1.73
ITSN2-201ENST00000355123 ATP1B4Q9UN42 357 aaPredicted RBP25.82■■□□□ 1.72
ITSN2-201ENST00000355123 TRIM41Q8WV44 630 aa25.51■■□□□ 1.67
ITSN2-201ENST00000355123 PPARGC1BQ86YN6 1023 aaKnown RBP25.48■■□□□ 1.67
ITSN2-201ENST00000355123 NEFLP07196 543 aa25.45■■□□□ 1.67
ITSN2-201ENST00000355123 UBTFP17480 764 aaKnown RBP25.39■■□□□ 1.65
ITSN2-201ENST00000355123 ZEB1P37275 1124 aaPredicted RBP25.37■■□□□ 1.65
ITSN2-201ENST00000355123 DAXXQ9UER7 740 aaPredicted RBP24.99■■□□□ 1.59
ITSN2-201ENST00000355123 POLR3GLQ9BT43 218 aa24.98■■□□□ 1.59
ITSN2-201ENST00000355123 CNGB1Q14028 1251 aaPredicted RBP24.97■■□□□ 1.59
ITSN2-201ENST00000355123 ITGAEP38570 1179 aa24.95■■□□□ 1.58
ITSN2-201ENST00000355123 MYT1LQ9UL68 1186 aa24.79■■□□□ 1.56
ITSN2-201ENST00000355123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.7■■□□□ 1.54
ITSN2-201ENST00000355123 HNRNPUL2Q1KMD3 747 aaKnown RBP24.7■■□□□ 1.54
ITSN2-201ENST00000355123 TRIM26Q12899 539 aaPredicted RBP24.7■■□□□ 1.54
ITSN2-201ENST00000355123 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
ITSN2-201ENST00000355123 HRCP23327 699 aa24.63■■□□□ 1.53
ITSN2-201ENST00000355123 LOC105371045A0A1W2PR82 267 aa24.62■■□□□ 1.53
ITSN2-201ENST00000355123 SLC4A1APQ9BWU0 796 aaKnown RBP24.47■■□□□ 1.51
ITSN2-201ENST00000355123 ZNF316A6NFI3 1004 aaPredicted RBP24.46■■□□□ 1.51
ITSN2-201ENST00000355123 RTL5Q5HYW3 569 aaPredicted RBP24.46■■□□□ 1.51
ITSN2-201ENST00000355123 CLSPNQ9HAW4 1339 aa24.36■■□□□ 1.49
ITSN2-201ENST00000355123 BCANQ96GW7 911 aa24.35■■□□□ 1.49
ITSN2-201ENST00000355123 DIEXFQ68CQ4 756 aaKnown RBP24.14■■□□□ 1.45
ITSN2-201ENST00000355123 FAM50AQ14320 339 aaKnown RBP24.1■■□□□ 1.45
ITSN2-201ENST00000355123 BCL11AQ9H165 835 aa24.06■■□□□ 1.44
ITSN2-201ENST00000355123 NEUROD1Q13562 356 aa24.05■■□□□ 1.44
ITSN2-201ENST00000355123 GTF3C3Q9Y5Q9 886 aa24.01■■□□□ 1.43
ITSN2-201ENST00000355123 TRIM52Q96A61 297 aa23.99■■□□□ 1.43
ITSN2-201ENST00000355123 ZNF326Q5BKZ1 582 aaKnown RBP23.9■■□□□ 1.42
ITSN2-201ENST00000355123 CDK11AQ9UQ88 783 aaPredicted RBP23.76■■□□□ 1.39
ITSN2-201ENST00000355123 EIF5BO60841 1220 aaKnown RBP23.73■■□□□ 1.39
ITSN2-201ENST00000355123 SLC24A1O60721 1099 aa23.71■■□□□ 1.39
ITSN2-201ENST00000355123 NPM2Q86SE8 214 aaKnown RBP23.67■■□□□ 1.38
ITSN2-201ENST00000355123 PABPN1Q86U42 306 aaKnown RBP eCLIP23.64■■□□□ 1.38
ITSN2-201ENST00000355123 ANP32CO43423 234 aa23.64■■□□□ 1.37
ITSN2-201ENST00000355123 ARID3CA6NKF2 412 aa23.6■■□□□ 1.37
ITSN2-201ENST00000355123 ZBTB47Q9UFB7 747 aaPredicted RBP23.57■■□□□ 1.36
ITSN2-201ENST00000355123 CANXP27824 592 aaKnown RBP23.56■■□□□ 1.36
ITSN2-201ENST00000355123 FBLN2P98095 1184 aa23.54■■□□□ 1.36
ITSN2-201ENST00000355123 P3H3Q8IVL6 736 aa23.46■■□□□ 1.35
ITSN2-201ENST00000355123 ANP32AP39687 249 aaKnown RBP23.4■■□□□ 1.34
ITSN2-201ENST00000355123 ARXQ96QS3 562 aa23.35■■□□□ 1.33
ITSN2-201ENST00000355123 ABCC9O60706 1549 aa23.33■■□□□ 1.32
ITSN2-201ENST00000355123 ACIN1Q9UKV3 1341 aaKnown RBP23.31■■□□□ 1.32
ITSN2-201ENST00000355123 NBR1Q14596 966 aa23.29■■□□□ 1.32
ITSN2-201ENST00000355123 ZNF777Q9ULD5 760 aaPredicted RBP23.28■■□□□ 1.32
ITSN2-201ENST00000355123 FKBP8Q14318 412 aa23.22■■□□□ 1.31
ITSN2-201ENST00000355123 NEFMP07197 916 aa23.19■■□□□ 1.3
ITSN2-201ENST00000355123 PLPPR3Q6T4P5 718 aa23.18■■□□□ 1.3
ITSN2-201ENST00000355123 SALL2Q9Y467 1007 aaPredicted RBP23.14■■□□□ 1.29
ITSN2-201ENST00000355123 ANP32BQ92688 251 aaKnown RBP23.13■■□□□ 1.29
ITSN2-201ENST00000355123 HSP90AA1P07900 732 aaKnown RBP23.13■■□□□ 1.29
ITSN2-201ENST00000355123 FAM9BQ8IZU0 186 aa23.04■■□□□ 1.28
ITSN2-201ENST00000355123 CHGAP10645 457 aaKnown RBP23.04■■□□□ 1.28
ITSN2-201ENST00000355123 GLIPR1L2Q4G1C9 344 aa23.01■■□□□ 1.27
ITSN2-201ENST00000355123 HNRNPUQ00839 825 aaKnown RBP eCLIP22.98■■□□□ 1.27
ITSN2-201ENST00000355123 DDX10Q13206 875 aaKnown RBP22.95■■□□□ 1.26
ITSN2-201ENST00000355123 IRX6P78412 446 aaPredicted RBP22.91■■□□□ 1.26
ITSN2-201ENST00000355123 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.25
ITSN2-201ENST00000355123 STAG3Q9UJ98 1225 aa22.87■■□□□ 1.25
ITSN2-201ENST00000355123 TONSLQ96HA7 1378 aa22.87■■□□□ 1.25
ITSN2-201ENST00000355123 SENP3Q9H4L4 574 aaPredicted RBP22.86■■□□□ 1.25
ITSN2-201ENST00000355123 CHIC2Q9UKJ5 165 aa22.84■■□□□ 1.25
ITSN2-201ENST00000355123 UPF2Q9HAU5 1272 aaKnown RBP22.83■■□□□ 1.24
ITSN2-201ENST00000355123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.81■■□□□ 1.242e-6■■□□□ 13.2
ITSN2-201ENST00000355123 ESF1Q9H501 851 aaKnown RBP22.8■■□□□ 1.24
ITSN2-201ENST00000355123 HIRIP3Q9BW71 556 aaPredicted RBP22.79■■□□□ 1.24
ITSN2-201ENST00000355123 CCDC136Q96JN2 1154 aa22.74■■□□□ 1.23
ITSN2-201ENST00000355123 KDM2AQ9Y2K7 1162 aa22.73■■□□□ 1.23
ITSN2-201ENST00000355123 PLEKHG5O94827 1062 aa22.72■■□□□ 1.23
ITSN2-201ENST00000355123 SENP3-EIF4A1A0A087X0R7 540 aa22.71■■□□□ 1.23
ITSN2-201ENST00000355123 TMC1Q8TDI8 760 aa22.69■■□□□ 1.22
ITSN2-201ENST00000355123 SCAF1Q9H7N4 1312 aaKnown RBP22.68■■□□□ 1.22
ITSN2-201ENST00000355123 TPRNQ4KMQ1 711 aa22.66■■□□□ 1.22
ITSN2-201ENST00000355123 RTN4Q9NQC3 1192 aaKnown RBP22.65■■□□□ 1.22
ITSN2-201ENST00000355123 WDR43Q15061 677 aaKnown RBP eCLIP22.62■■□□□ 1.21
ITSN2-201ENST00000355123 ZBTB7CA1YPR0 619 aa22.6■■□□□ 1.21
ITSN2-201ENST00000355123 A0A0G2JS52 829 aa22.6■■□□□ 1.21
ITSN2-201ENST00000355123 MRS2Q9HD23 443 aa22.6■■□□□ 1.21
ITSN2-201ENST00000355123 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
ITSN2-201ENST00000355123 MIER1Q8N108 512 aa22.57■■□□□ 1.2
ITSN2-201ENST00000355123 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.55■■□□□ 1.2
ITSN2-201ENST00000355123 NCLP19338 710 aaKnown RBP22.48■■□□□ 1.19
ITSN2-201ENST00000355123 TRIM44Q96DX7 344 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms