RNA–Protein interactions for RNA: ENST00000418389.6

NDUFA11-202, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

TSL 2 BASIC

Gene NDUFA11, Length 2,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-202ENST00000418389 NISCHQ9Y2I1 1504 aa33.36■■■□□ 2.93
NDUFA11-202ENST00000418389 CCDC180Q9P1Z9 1646 aa28.79■■■□□ 2.2
NDUFA11-202ENST00000418389 ZCCHC6Q5VYS8 1495 aaKnown RBP28.16■■■□□ 2.1
NDUFA11-202ENST00000418389 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
NDUFA11-202ENST00000418389 DCAF1Q9Y4B6 1507 aa27.5■■□□□ 1.99
NDUFA11-202ENST00000418389 DCAF8L2P0C7V8 631 aa27.46■■□□□ 1.99
NDUFA11-202ENST00000418389 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.92
NDUFA11-202ENST00000418389 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
NDUFA11-202ENST00000418389 ABCC9O60706 1549 aa26.78■■□□□ 1.88
NDUFA11-202ENST00000418389 SCRIBQ14160 1630 aa26.69■■□□□ 1.86
NDUFA11-202ENST00000418389 NACADO15069 1562 aa26.64■■□□□ 1.86
NDUFA11-202ENST00000418389 RB1CC1Q8TDY2 1594 aa26.3■■□□□ 1.8
NDUFA11-202ENST00000418389 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.77
NDUFA11-202ENST00000418389 CHIC1Q5VXU3 224 aa26.13■■□□□ 1.77
NDUFA11-202ENST00000418389 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
NDUFA11-202ENST00000418389 UNC13AQ9UPW8 1703 aa25.94■■□□□ 1.74
NDUFA11-202ENST00000418389 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
NDUFA11-202ENST00000418389 WIZO95785 1651 aa25.73■■□□□ 1.71
NDUFA11-202ENST00000418389 BAZ1AQ9NRL2 1556 aaPredicted RBP25.7■■□□□ 1.71
NDUFA11-202ENST00000418389 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
NDUFA11-202ENST00000418389 SMARCA4P51532 1647 aa25.56■■□□□ 1.68
NDUFA11-202ENST00000418389 PABPN1Q86U42 306 aaKnown RBP eCLIP25.39■■□□□ 1.66
NDUFA11-202ENST00000418389 TOP2AP11388 1531 aaKnown RBP25.39■■□□□ 1.65
NDUFA11-202ENST00000418389 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
NDUFA11-202ENST00000418389 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
NDUFA11-202ENST00000418389 LOC105371045A0A1W2PR82 267 aa25.22■■□□□ 1.63
NDUFA11-202ENST00000418389 SMARCA2P51531 1590 aa25.21■■□□□ 1.63
NDUFA11-202ENST00000418389 CCDC88BA6NC98 1476 aa25.16■■□□□ 1.62
NDUFA11-202ENST00000418389 PEG3Q9GZU2 1588 aa25.15■■□□□ 1.62
NDUFA11-202ENST00000418389 ATAD2BQ9ULI0 1458 aa24.95■■□□□ 1.58
NDUFA11-202ENST00000418389 FAM9AQ8IZU1 332 aaPredicted RBP24.94■■□□□ 1.58
NDUFA11-202ENST00000418389 ABCC8Q09428 1581 aa24.91■■□□□ 1.58
NDUFA11-202ENST00000418389 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
NDUFA11-202ENST00000418389 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
NDUFA11-202ENST00000418389 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
NDUFA11-202ENST00000418389 HMGXB3Q12766 1538 aa24.62■■□□□ 1.53
NDUFA11-202ENST00000418389 NCAPD3P42695 1498 aa24.58■■□□□ 1.53
NDUFA11-202ENST00000418389 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.53
NDUFA11-202ENST00000418389 SOGA1O94964 1423 aa24.53■■□□□ 1.52
NDUFA11-202ENST00000418389 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
NDUFA11-202ENST00000418389 EEA1Q15075 1411 aa24.48■■□□□ 1.51
NDUFA11-202ENST00000418389 TRIM26Q12899 539 aaPredicted RBP24.46■■□□□ 1.51
NDUFA11-202ENST00000418389 HRCP23327 699 aa24.46■■□□□ 1.51
NDUFA11-202ENST00000418389 RUSC2Q8N2Y8 1516 aa24.43■■□□□ 1.5
NDUFA11-202ENST00000418389 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
NDUFA11-202ENST00000418389 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
NDUFA11-202ENST00000418389 BIVM-ERCC5R4GMW8 1640 aa24.29■■□□□ 1.48
NDUFA11-202ENST00000418389 TNIKQ9UKE5 1360 aa24.25■■□□□ 1.47
NDUFA11-202ENST00000418389 GOLGA3Q08378 1498 aa24.24■■□□□ 1.47
NDUFA11-202ENST00000418389 CFTRP13569 1480 aa24.23■■□□□ 1.47
NDUFA11-202ENST00000418389 CEP162Q5TB80 1403 aa24.23■■□□□ 1.47
NDUFA11-202ENST00000418389 CC2D2AQ9P2K1 1620 aa24.23■■□□□ 1.47
NDUFA11-202ENST00000418389 PRDM2Q13029 1718 aa24.23■■□□□ 1.47
NDUFA11-202ENST00000418389 KIF21BO75037 1637 aa24.21■■□□□ 1.47
NDUFA11-202ENST00000418389 CEP164Q9UPV0 1460 aa24.16■■□□□ 1.46
NDUFA11-202ENST00000418389 CUX1P39880 1505 aa24.14■■□□□ 1.45
NDUFA11-202ENST00000418389 UBTFP17480 764 aaKnown RBP24.13■■□□□ 1.45
NDUFA11-202ENST00000418389 PPARGC1BQ86YN6 1023 aaKnown RBP24.04■■□□□ 1.44
NDUFA11-202ENST00000418389 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
NDUFA11-202ENST00000418389 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
NDUFA11-202ENST00000418389 ERICH3Q5RHP9 1530 aa23.9■■□□□ 1.42
NDUFA11-202ENST00000418389 CLIP1P30622 1438 aa23.89■■□□□ 1.41
NDUFA11-202ENST00000418389 PRXQ9BXM0 1461 aa23.88■■□□□ 1.41
NDUFA11-202ENST00000418389 KIF27Q86VH2 1401 aa23.87■■□□□ 1.41
NDUFA11-202ENST00000418389 FANCD2Q9BXW9 1451 aa23.8■■□□□ 1.4
NDUFA11-202ENST00000418389 FGD5Q6ZNL6 1462 aa23.76■■□□□ 1.39
NDUFA11-202ENST00000418389 TTBK1Q5TCY1 1321 aaPredicted RBP23.75■■□□□ 1.39
NDUFA11-202ENST00000418389 VPS8Q8N3P4 1428 aa23.75■■□□□ 1.39
NDUFA11-202ENST00000418389 ZEB1P37275 1124 aaPredicted RBP23.74■■□□□ 1.39
NDUFA11-202ENST00000418389 NESP48681 1621 aa23.73■■□□□ 1.39
NDUFA11-202ENST00000418389 CUX2O14529 1486 aa23.73■■□□□ 1.39
NDUFA11-202ENST00000418389 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
NDUFA11-202ENST00000418389 LAMC3Q9Y6N6 1575 aa23.67■■□□□ 1.38
NDUFA11-202ENST00000418389 RANGAP1P46060 587 aaPredicted RBP23.66■■□□□ 1.38
NDUFA11-202ENST00000418389 TOPBP1Q92547 1522 aa23.62■■□□□ 1.37
NDUFA11-202ENST00000418389 IGF1RP08069 1367 aa23.61■■□□□ 1.37
NDUFA11-202ENST00000418389 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
NDUFA11-202ENST00000418389 POLA1P09884 1462 aaPredicted RBP23.55■■□□□ 1.36
NDUFA11-202ENST00000418389 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
NDUFA11-202ENST00000418389 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
NDUFA11-202ENST00000418389 APLP2Q06481 763 aa23.51■■□□□ 1.35
NDUFA11-202ENST00000418389 CARMIL1Q5VZK9 1371 aa23.5■■□□□ 1.35
NDUFA11-202ENST00000418389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.5■■□□□ 1.35
NDUFA11-202ENST00000418389 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
NDUFA11-202ENST00000418389 URB2Q14146 1524 aaKnown RBP23.49■■□□□ 1.35
NDUFA11-202ENST00000418389 ARHGAP35Q9NRY4 1499 aa23.47■■□□□ 1.35
NDUFA11-202ENST00000418389 KIF21AQ7Z4S6 1674 aa23.46■■□□□ 1.35
NDUFA11-202ENST00000418389 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
NDUFA11-202ENST00000418389 PDS5BQ9NTI5 1447 aa23.45■■□□□ 1.34
NDUFA11-202ENST00000418389 CCER1Q8TC90 406 aaPredicted RBP23.44■■□□□ 1.34
NDUFA11-202ENST00000418389 CUL7Q14999 1698 aa23.39■■□□□ 1.34
NDUFA11-202ENST00000418389 ABCA5Q8WWZ7 1642 aa23.32■■□□□ 1.32
NDUFA11-202ENST00000418389 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
NDUFA11-202ENST00000418389 KANK4Q5T7N3 995 aaPredicted RBP23.27■■□□□ 1.31
NDUFA11-202ENST00000418389 PELP1Q8IZL8 1130 aaKnown RBP23.26■■□□□ 1.31
NDUFA11-202ENST00000418389 HNRNPUL2Q1KMD3 747 aaKnown RBP23.25■■□□□ 1.31
NDUFA11-202ENST00000418389 TARBP1Q13395 1621 aaKnown RBP23.23■■□□□ 1.31
NDUFA11-202ENST00000418389 TDRD9Q8NDG6 1382 aaKnown RBP23.22■■□□□ 1.31
NDUFA11-202ENST00000418389 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
NDUFA11-202ENST00000418389 TIAM1Q13009 1591 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms