RNA–Protein interactions for RNA: ENST00000556018.5

TC2N-206, Transcript of tandem C2 domains, nuclear, humanhuman

TSL 2 BASIC

Gene TC2N, Length 1,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TC2N-206ENST00000556018 NISCHQ9Y2I1 1504 aa35.85■■■■□ 3.33
TC2N-206ENST00000556018 CCDC180Q9P1Z9 1646 aa31.43■■■□□ 2.62
TC2N-206ENST00000556018 ABCC9O60706 1549 aa30.3■■■□□ 2.44
TC2N-206ENST00000556018 ZCCHC6Q5VYS8 1495 aaKnown RBP30■■■□□ 2.39
TC2N-206ENST00000556018 DCAF8L2P0C7V8 631 aa29.82■■■□□ 2.36
TC2N-206ENST00000556018 DCAF1Q9Y4B6 1507 aa29.57■■■□□ 2.32
TC2N-206ENST00000556018 NACADO15069 1562 aa29.4■■■□□ 2.3
TC2N-206ENST00000556018 MYO15BQ96JP2 1530 aa29.4■■■□□ 2.3
TC2N-206ENST00000556018 RB1CC1Q8TDY2 1594 aa29.27■■■□□ 2.28
TC2N-206ENST00000556018 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
TC2N-206ENST00000556018 SCRIBQ14160 1630 aa28.91■■■□□ 2.22
TC2N-206ENST00000556018 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
TC2N-206ENST00000556018 PABPN1Q86U42 306 aaKnown RBP eCLIP28.52■■■□□ 2.16
TC2N-206ENST00000556018 BICRAQ9NZM4 1560 aa28.52■■■□□ 2.16
TC2N-206ENST00000556018 CECR2Q9BXF3 1484 aa27.98■■■□□ 2.07
TC2N-206ENST00000556018 MROH2BQ7Z745 1585 aa27.73■■■□□ 2.03
TC2N-206ENST00000556018 BAZ1AQ9NRL2 1556 aaPredicted RBP27.67■■■□□ 2.02
TC2N-206ENST00000556018 SMARCA4P51532 1647 aa27.66■■■□□ 2.02
TC2N-206ENST00000556018 RSF1Q96T23 1441 aaPredicted RBP27.64■■■□□ 2.02
TC2N-206ENST00000556018 EIF4G1Q04637 1599 aaKnown RBP27.64■■■□□ 2.01
TC2N-206ENST00000556018 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
TC2N-206ENST00000556018 WIZO95785 1651 aa27.47■■□□□ 1.99
TC2N-206ENST00000556018 CC2D2AQ9P2K1 1620 aa27.38■■□□□ 1.97
TC2N-206ENST00000556018 ATAD2BQ9ULI0 1458 aa27.36■■□□□ 1.97
TC2N-206ENST00000556018 DNAJC5BQ9UF47 199 aa27.33■■□□□ 1.97
TC2N-206ENST00000556018 PEG3Q9GZU2 1588 aa27.32■■□□□ 1.96
TC2N-206ENST00000556018 SMARCA2P51531 1590 aa27.24■■□□□ 1.95
TC2N-206ENST00000556018 NCAPD3P42695 1498 aa27.18■■□□□ 1.94
TC2N-206ENST00000556018 BAZ1BQ9UIG0 1483 aaKnown RBP27.12■■□□□ 1.93
TC2N-206ENST00000556018 TOP2AP11388 1531 aaKnown RBP27.1■■□□□ 1.93
TC2N-206ENST00000556018 HMGXB3Q12766 1538 aa27.06■■□□□ 1.92
TC2N-206ENST00000556018 CCDC88BA6NC98 1476 aa26.88■■□□□ 1.89
TC2N-206ENST00000556018 NESP48681 1621 aa26.48■■□□□ 1.83
TC2N-206ENST00000556018 CADPSQ9ULU8 1353 aa26.46■■□□□ 1.83
TC2N-206ENST00000556018 CFTRP13569 1480 aa26.44■■□□□ 1.82
TC2N-206ENST00000556018 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
TC2N-206ENST00000556018 PRDM2Q13029 1718 aa26.22■■□□□ 1.79
TC2N-206ENST00000556018 ABCC8Q09428 1581 aa26.16■■□□□ 1.78
TC2N-206ENST00000556018 FANCD2Q9BXW9 1451 aa26.16■■□□□ 1.78
TC2N-206ENST00000556018 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
TC2N-206ENST00000556018 PDS5BQ9NTI5 1447 aa26.11■■□□□ 1.77
TC2N-206ENST00000556018 KIF21AQ7Z4S6 1674 aa26.1■■□□□ 1.77
TC2N-206ENST00000556018 CEP164Q9UPV0 1460 aa26.01■■□□□ 1.75
TC2N-206ENST00000556018 WRNQ14191 1432 aaPredicted RBP eCLIP25.98■■□□□ 1.75
TC2N-206ENST00000556018 SYNJ1O43426 1573 aa25.95■■□□□ 1.75
TC2N-206ENST00000556018 CUX1P39880 1505 aa25.94■■□□□ 1.74
TC2N-206ENST00000556018 ERCC6Q03468 1493 aa25.94■■□□□ 1.74
TC2N-206ENST00000556018 URB2Q14146 1524 aaKnown RBP25.91■■□□□ 1.74
TC2N-206ENST00000556018 TRIM41Q8WV44 630 aa25.91■■□□□ 1.74
TC2N-206ENST00000556018 TOPBP1Q92547 1522 aa25.84■■□□□ 1.73
TC2N-206ENST00000556018 TOP2BQ02880 1626 aa25.84■■□□□ 1.73
TC2N-206ENST00000556018 MRC2Q9UBG0 1479 aa25.83■■□□□ 1.73
TC2N-206ENST00000556018 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
TC2N-206ENST00000556018 DNMBPQ6XZF7 1577 aa25.81■■□□□ 1.72
TC2N-206ENST00000556018 THOC2Q8NI27 1593 aaKnown RBP25.79■■□□□ 1.72
TC2N-206ENST00000556018 WDR62O43379 1518 aa25.72■■□□□ 1.71
TC2N-206ENST00000556018 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
TC2N-206ENST00000556018 POLA1P09884 1462 aaPredicted RBP25.67■■□□□ 1.7
TC2N-206ENST00000556018 RAD54L2Q9Y4B4 1467 aa25.64■■□□□ 1.69
TC2N-206ENST00000556018 CUX2O14529 1486 aa25.6■■□□□ 1.69
TC2N-206ENST00000556018 SOGA1O94964 1423 aa25.58■■□□□ 1.69
TC2N-206ENST00000556018 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
TC2N-206ENST00000556018 FAM9AQ8IZU1 332 aaPredicted RBP25.51■■□□□ 1.67
TC2N-206ENST00000556018 TARBP1Q13395 1621 aaKnown RBP25.5■■□□□ 1.67
TC2N-206ENST00000556018 ABCA10Q8WWZ4 1543 aa25.45■■□□□ 1.66
TC2N-206ENST00000556018 WDR97A6NE52 1622 aa25.43■■□□□ 1.66
TC2N-206ENST00000556018 TDRD9Q8NDG6 1382 aaKnown RBP25.42■■□□□ 1.66
TC2N-206ENST00000556018 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
TC2N-206ENST00000556018 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
TC2N-206ENST00000556018 AQRO60306 1485 aaKnown RBP eCLIP25.35■■□□□ 1.65
TC2N-206ENST00000556018 KIF27Q86VH2 1401 aa25.34■■□□□ 1.65
TC2N-206ENST00000556018 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
TC2N-206ENST00000556018 CSRNP3Q8WYN3 585 aa25.28■■□□□ 1.64
TC2N-206ENST00000556018 GAPVD1Q14C86 1478 aa25.27■■□□□ 1.64
TC2N-206ENST00000556018 IGF1RP08069 1367 aa25.26■■□□□ 1.63
TC2N-206ENST00000556018 EEA1Q15075 1411 aa25.25■■□□□ 1.63
TC2N-206ENST00000556018 EIF4G3O43432 1585 aaKnown RBP25.24■■□□□ 1.63
TC2N-206ENST00000556018 EHMT2Q96KQ7 1210 aa25.21■■□□□ 1.63
TC2N-206ENST00000556018 LOC105371045A0A1W2PR82 267 aa25.19■■□□□ 1.62
TC2N-206ENST00000556018 PBRM1Q86U86 1689 aa25.16■■□□□ 1.62
TC2N-206ENST00000556018 GRIN2BQ13224 1484 aa25.13■■□□□ 1.61
TC2N-206ENST00000556018 ERICH3Q5RHP9 1530 aa25.12■■□□□ 1.61
TC2N-206ENST00000556018 PRXQ9BXM0 1461 aa25.1■■□□□ 1.61
TC2N-206ENST00000556018 CARMIL1Q5VZK9 1371 aa25.08■■□□□ 1.61
TC2N-206ENST00000556018 SNAPC4Q5SXM2 1469 aa25.06■■□□□ 1.6
TC2N-206ENST00000556018 RAPGEF2Q9Y4G8 1499 aa25.05■■□□□ 1.6
TC2N-206ENST00000556018 KIF21BO75037 1637 aa25.01■■□□□ 1.59
TC2N-206ENST00000556018 CUL7Q14999 1698 aa25■■□□□ 1.59
TC2N-206ENST00000556018 ADAMTS12P58397 1594 aa24.99■■□□□ 1.59
TC2N-206ENST00000556018 FHAD1B1AJZ9 1412 aa24.97■■□□□ 1.59
TC2N-206ENST00000556018 MAGI1Q96QZ7 1491 aaPredicted RBP24.95■■□□□ 1.59
TC2N-206ENST00000556018 GOLGA3Q08378 1498 aa24.93■■□□□ 1.58
TC2N-206ENST00000556018 FBLN2P98095 1184 aa24.9■■□□□ 1.58
TC2N-206ENST00000556018 UBTFP17480 764 aaKnown RBP24.9■■□□□ 1.58
TC2N-206ENST00000556018 SYNJ2O15056 1496 aa24.89■■□□□ 1.57
TC2N-206ENST00000556018 CHMP7Q8WUX9 453 aaPredicted RBP24.87■■□□□ 1.57
TC2N-206ENST00000556018 GRIN2AQ12879 1464 aa24.84■■□□□ 1.57
TC2N-206ENST00000556018 CHD1O14646 1710 aa24.82■■□□□ 1.56
TC2N-206ENST00000556018 TNIKQ9UKE5 1360 aa24.78■■□□□ 1.56
TC2N-206ENST00000556018 CEP170Q5SW79 1584 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms