RNA–Protein interactions for RNA: ENST00000341772.4

DNER-201, Transcript of delta/notch like EGF repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNER, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNER-201ENST00000341772 NISCHQ9Y2I1 1504 aa27.15■■□□□ 1.94
DNER-201ENST00000341772 SHROOM4Q9ULL8 1493 aa25.25■■□□□ 1.63
DNER-201ENST00000341772 SUPT5HO00267 1087 aaKnown RBP25.08■■□□□ 1.6
DNER-201ENST00000341772 DCAF8L2P0C7V8 631 aa24.73■■□□□ 1.55
DNER-201ENST00000341772 PCGF6Q9BYE7 350 aa24.15■■□□□ 1.46
DNER-201ENST00000341772 PPARGC1BQ86YN6 1023 aaKnown RBP23.96■■□□□ 1.43
DNER-201ENST00000341772 EHMT2Q96KQ7 1210 aa23.87■■□□□ 1.41
DNER-201ENST00000341772 CHIC1Q5VXU3 224 aa23.72■■□□□ 1.39
DNER-201ENST00000341772 HRCP23327 699 aa23.72■■□□□ 1.39
DNER-201ENST00000341772 LOC105371045A0A1W2PR82 267 aa23.7■■□□□ 1.38
DNER-201ENST00000341772 MYO15BQ96JP2 1530 aa23.51■■□□□ 1.35
DNER-201ENST00000341772 FAM9AQ8IZU1 332 aaPredicted RBP23.45■■□□□ 1.34
DNER-201ENST00000341772 TTBK1Q5TCY1 1321 aaPredicted RBP23.07■■□□□ 1.28
DNER-201ENST00000341772 TRIM26Q12899 539 aaPredicted RBP22.89■■□□□ 1.25
DNER-201ENST00000341772 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
DNER-201ENST00000341772 ZCCHC6Q5VYS8 1495 aaKnown RBP22.85■■□□□ 1.25
DNER-201ENST00000341772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.56■■□□□ 1.2
DNER-201ENST00000341772 CCER1Q8TC90 406 aaPredicted RBP22.47■■□□□ 1.19
DNER-201ENST00000341772 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.18
DNER-201ENST00000341772 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.18
DNER-201ENST00000341772 ZEB1P37275 1124 aaPredicted RBP22.34■■□□□ 1.17
DNER-201ENST00000341772 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
DNER-201ENST00000341772 RANGAP1P46060 587 aaPredicted RBP22.27■■□□□ 1.16
DNER-201ENST00000341772 NEUROD1Q13562 356 aa22.08■■□□□ 1.12
DNER-201ENST00000341772 CCDC180Q9P1Z9 1646 aa22.05■■□□□ 1.12
DNER-201ENST00000341772 GTF3C3Q9Y5Q9 886 aa22.04■■□□□ 1.12
DNER-201ENST00000341772 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
DNER-201ENST00000341772 DIEXFQ68CQ4 756 aaKnown RBP22.01■■□□□ 1.11
DNER-201ENST00000341772 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
DNER-201ENST00000341772 RSF1Q96T23 1441 aaPredicted RBP21.98■■□□□ 1.11
DNER-201ENST00000341772 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
DNER-201ENST00000341772 ACIN1Q9UKV3 1341 aaKnown RBP21.89■■□□□ 1.1
DNER-201ENST00000341772 PELP1Q8IZL8 1130 aaKnown RBP21.89■■□□□ 1.09
DNER-201ENST00000341772 CENPBP07199 599 aaPredicted RBP21.86■■□□□ 1.09
DNER-201ENST00000341772 ABCC9O60706 1549 aa21.84■■□□□ 1.09
DNER-201ENST00000341772 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
DNER-201ENST00000341772 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
DNER-201ENST00000341772 PABPN1Q86U42 306 aaKnown RBP eCLIP21.55■■□□□ 1.04
DNER-201ENST00000341772 APLP2Q06481 763 aa21.55■■□□□ 1.04
DNER-201ENST00000341772 MIER1Q8N108 512 aa21.52■■□□□ 1.04
DNER-201ENST00000341772 ITGAEP38570 1179 aa21.5■■□□□ 1.03
DNER-201ENST00000341772 ZNF316A6NFI3 1004 aaPredicted RBP21.49■■□□□ 1.03
DNER-201ENST00000341772 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
DNER-201ENST00000341772 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.01
DNER-201ENST00000341772 SOGA1O94964 1423 aa21.36■■□□□ 1.01
DNER-201ENST00000341772 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
DNER-201ENST00000341772 CEP162Q5TB80 1403 aa21.31■■□□□ 1
DNER-201ENST00000341772 CCDC88BA6NC98 1476 aa21.3■■□□□ 1
DNER-201ENST00000341772 WIZO95785 1651 aa21.29■■□□□ 1
DNER-201ENST00000341772 BCANQ96GW7 911 aa21.24■□□□□ 0.99
DNER-201ENST00000341772 RUSC2Q8N2Y8 1516 aa21.22■□□□□ 0.99
DNER-201ENST00000341772 ATP1B4Q9UN42 357 aaPredicted RBP21.19■□□□□ 0.98
DNER-201ENST00000341772 HIRIP3Q9BW71 556 aaPredicted RBP21.02■□□□□ 0.96
DNER-201ENST00000341772 TNIKQ9UKE5 1360 aa20.97■□□□□ 0.95
DNER-201ENST00000341772 KCNH8Q96L42 1107 aa20.95■□□□□ 0.94
DNER-201ENST00000341772 CLIP1P30622 1438 aa20.9■□□□□ 0.94
DNER-201ENST00000341772 P3H3Q8IVL6 736 aa20.87■□□□□ 0.93
DNER-201ENST00000341772 KANK4Q5T7N3 995 aaPredicted RBP20.85■□□□□ 0.93
DNER-201ENST00000341772 CNGB1Q14028 1251 aaPredicted RBP20.82■□□□□ 0.92
DNER-201ENST00000341772 DDX10Q13206 875 aaKnown RBP20.81■□□□□ 0.92
DNER-201ENST00000341772 FAM50AQ14320 339 aaKnown RBP20.81■□□□□ 0.92
DNER-201ENST00000341772 SUPT16HQ9Y5B9 1047 aaKnown RBP20.81■□□□□ 0.92
DNER-201ENST00000341772 GOLGA3Q08378 1498 aa20.79■□□□□ 0.92
DNER-201ENST00000341772 WRNQ14191 1432 aaPredicted RBP eCLIP20.79■□□□□ 0.92
DNER-201ENST00000341772 TRIM52Q96A61 297 aa20.76■□□□□ 0.91
DNER-201ENST00000341772 BAZ1AQ9NRL2 1556 aaPredicted RBP20.75■□□□□ 0.91
DNER-201ENST00000341772 FKBP8Q14318 412 aa20.73■□□□□ 0.91
DNER-201ENST00000341772 NACADO15069 1562 aa20.73■□□□□ 0.91
DNER-201ENST00000341772 MYT1Q01538 1121 aa20.72■□□□□ 0.91
DNER-201ENST00000341772 SIN3AQ96ST3 1273 aa20.69■□□□□ 0.9
DNER-201ENST00000341772 RAPGEF2Q9Y4G8 1499 aa20.65■□□□□ 0.9
DNER-201ENST00000341772 IRX6P78412 446 aaPredicted RBP20.63■□□□□ 0.89
DNER-201ENST00000341772 NEFLP07196 543 aa20.59■□□□□ 0.89
DNER-201ENST00000341772 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
DNER-201ENST00000341772 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.89
DNER-201ENST00000341772 TSHZ2Q9NRE2 1034 aa20.57■□□□□ 0.88
DNER-201ENST00000341772 VPS8Q8N3P4 1428 aa20.56■□□□□ 0.88
DNER-201ENST00000341772 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
DNER-201ENST00000341772 SENP3-EIF4A1A0A087X0R7 540 aa20.55■□□□□ 0.88
DNER-201ENST00000341772 EEA1Q15075 1411 aa20.53■□□□□ 0.88
DNER-201ENST00000341772 DHX57Q6P158 1386 aaKnown RBP20.52■□□□□ 0.88
DNER-201ENST00000341772 ARID3CA6NKF2 412 aa20.49■□□□□ 0.87
DNER-201ENST00000341772 SMARCA4P51532 1647 aa20.48■□□□□ 0.87
DNER-201ENST00000341772 POLR3GLQ9BT43 218 aa20.42■□□□□ 0.86
DNER-201ENST00000341772 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
DNER-201ENST00000341772 ANP32CO43423 234 aa20.37■□□□□ 0.85
DNER-201ENST00000341772 EIF4G1Q04637 1599 aaKnown RBP20.37■□□□□ 0.85
DNER-201ENST00000341772 ERICH6Q7L0X2 663 aa20.33■□□□□ 0.85
DNER-201ENST00000341772 ANP32EQ9BTT0 268 aa20.33■□□□□ 0.85
DNER-201ENST00000341772 CCNB3Q8WWL7 1395 aa20.32■□□□□ 0.84
DNER-201ENST00000341772 HNRNPUQ00839 825 aaKnown RBP eCLIP20.31■□□□□ 0.84
DNER-201ENST00000341772 RAB3GAP2Q9H2M9 1393 aa20.31■□□□□ 0.84
DNER-201ENST00000341772 BAZ1BQ9UIG0 1483 aaKnown RBP20.31■□□□□ 0.84
DNER-201ENST00000341772 KIF21BO75037 1637 aa20.31■□□□□ 0.84
DNER-201ENST00000341772 CHIC2Q9UKJ5 165 aa20.29■□□□□ 0.84
DNER-201ENST00000341772 RBM19Q9Y4C8 960 aaKnown RBP20.23■□□□□ 0.83
DNER-201ENST00000341772 ARAP1Q96P48 1450 aa20.21■□□□□ 0.83
DNER-201ENST00000341772 FAM9BQ8IZU0 186 aa20.2■□□□□ 0.82
DNER-201ENST00000341772 RRP7BPQ9NSQ0 103 aa20.15■□□□□ 0.82
DNER-201ENST00000341772 CLSPNQ9HAW4 1339 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms