Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TSR1Q2NL82 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TSR1Q2NL82 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TSR1Q2NL82 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TSR1Q2NL82 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TSR1Q2NL82 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TSR1Q2NL82 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TSR1Q2NL82 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 BNIP3P41-202ENST00000616656 861 ntBASIC16.86■□□□□ 0.29
TSR1Q2NL82 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 AC079781.4-201ENST00000641908 219 ntBASIC16.86■□□□□ 0.29
TSR1Q2NL82 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TSR1Q2NL82 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TSR1Q2NL82 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TSR1Q2NL82 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TSR1Q2NL82 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TSR1Q2NL82 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.86■□□□□ 0.29
TSR1Q2NL82 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 AC084121.4-201ENST00000641598 221 ntBASIC16.85■□□□□ 0.29
TSR1Q2NL82 AF228730.8-201ENST00000642140 221 ntBASIC16.85■□□□□ 0.29
TSR1Q2NL82 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TSR1Q2NL82 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TSR1Q2NL82 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TSR1Q2NL82 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TSR1Q2NL82 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.84■□□□□ 0.29
TSR1Q2NL82 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TSR1Q2NL82 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TSR1Q2NL82 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.84■□□□□ 0.29
TSR1Q2NL82 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.84■□□□□ 0.29
TSR1Q2NL82 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.84■□□□□ 0.29
TSR1Q2NL82 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TSR1Q2NL82 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.84■□□□□ 0.29
TSR1Q2NL82 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TSR1Q2NL82 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TSR1Q2NL82 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TSR1Q2NL82 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TSR1Q2NL82 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TSR1Q2NL82 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.84■□□□□ 0.29
TSR1Q2NL82 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TSR1Q2NL82 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TSR1Q2NL82 GHSR-202ENST00000427970 912 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms