RNA–Protein interactions for RNA: ENST00000390609.3

IGHV3-23-201, Transcript of immunoglobulin heavy variable 3-23, humanhuman

APPRIS P1 BASIC

Gene IGHV3-23, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-23-201ENST00000390609 NISCHQ9Y2I1 1504 aa38.63■■■■□ 3.78
IGHV3-23-201ENST00000390609 ABCC9O60706 1549 aa34.45■■■■□ 3.1
IGHV3-23-201ENST00000390609 CCDC180Q9P1Z9 1646 aa34.19■■■■□ 3.06
IGHV3-23-201ENST00000390609 DNAJC5BQ9UF47 199 aa32.76■■■□□ 2.83
IGHV3-23-201ENST00000390609 RB1CC1Q8TDY2 1594 aa32.54■■■□□ 2.8
IGHV3-23-201ENST00000390609 DCAF8L2P0C7V8 631 aa32.44■■■□□ 2.78
IGHV3-23-201ENST00000390609 ZCCHC6Q5VYS8 1495 aaKnown RBP32.2■■■□□ 2.75
IGHV3-23-201ENST00000390609 NACADO15069 1562 aa32.19■■■□□ 2.74
IGHV3-23-201ENST00000390609 PABPN1Q86U42 306 aaKnown RBP eCLIP32.05■■■□□ 2.72
IGHV3-23-201ENST00000390609 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.71
IGHV3-23-201ENST00000390609 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
IGHV3-23-201ENST00000390609 UNC13AQ9UPW8 1703 aa31.72■■■□□ 2.67
IGHV3-23-201ENST00000390609 BICRAQ9NZM4 1560 aa31.57■■■□□ 2.64
IGHV3-23-201ENST00000390609 SCRIBQ14160 1630 aa31.33■■■□□ 2.61
IGHV3-23-201ENST00000390609 SHROOM4Q9ULL8 1493 aa31.09■■■□□ 2.57
IGHV3-23-201ENST00000390609 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
IGHV3-23-201ENST00000390609 CC2D2AQ9P2K1 1620 aa31.05■■■□□ 2.56
IGHV3-23-201ENST00000390609 EIF4G1Q04637 1599 aaKnown RBP30.86■■■□□ 2.53
IGHV3-23-201ENST00000390609 DNAJC5Q9H3Z4 198 aa30.44■■■□□ 2.46
IGHV3-23-201ENST00000390609 BAZ1AQ9NRL2 1556 aaPredicted RBP29.94■■■□□ 2.38
IGHV3-23-201ENST00000390609 SMARCA4P51532 1647 aa29.93■■■□□ 2.38
IGHV3-23-201ENST00000390609 CUX2O14529 1486 aa29.84■■■□□ 2.37
IGHV3-23-201ENST00000390609 MROH2BQ7Z745 1585 aa29.8■■■□□ 2.36
IGHV3-23-201ENST00000390609 ERCC6Q03468 1493 aa29.79■■■□□ 2.36
IGHV3-23-201ENST00000390609 NCAPD3P42695 1498 aa29.75■■■□□ 2.35
IGHV3-23-201ENST00000390609 ATAD2BQ9ULI0 1458 aa29.74■■■□□ 2.35
IGHV3-23-201ENST00000390609 SMARCA2P51531 1590 aa29.7■■■□□ 2.35
IGHV3-23-201ENST00000390609 PEG3Q9GZU2 1588 aa29.57■■■□□ 2.32
IGHV3-23-201ENST00000390609 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
IGHV3-23-201ENST00000390609 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
IGHV3-23-201ENST00000390609 HMGXB3Q12766 1538 aa29.52■■■□□ 2.32
IGHV3-23-201ENST00000390609 WIZO95785 1651 aa29.48■■■□□ 2.31
IGHV3-23-201ENST00000390609 NESP48681 1621 aa29.44■■■□□ 2.3
IGHV3-23-201ENST00000390609 THOC2Q8NI27 1593 aaKnown RBP29.17■■■□□ 2.26
IGHV3-23-201ENST00000390609 TOP2AP11388 1531 aaKnown RBP29.16■■■□□ 2.26
IGHV3-23-201ENST00000390609 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
IGHV3-23-201ENST00000390609 SUPT5HO00267 1087 aaKnown RBP29.09■■■□□ 2.25
IGHV3-23-201ENST00000390609 PDS5BQ9NTI5 1447 aa29.03■■■□□ 2.24
IGHV3-23-201ENST00000390609 KIF21AQ7Z4S6 1674 aa28.99■■■□□ 2.23
IGHV3-23-201ENST00000390609 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
IGHV3-23-201ENST00000390609 CADPSQ9ULU8 1353 aa28.87■■■□□ 2.21
IGHV3-23-201ENST00000390609 CCDC88BA6NC98 1476 aa28.86■■■□□ 2.21
IGHV3-23-201ENST00000390609 MRC2Q9UBG0 1479 aa28.78■■■□□ 2.2
IGHV3-23-201ENST00000390609 CFTRP13569 1480 aa28.7■■■□□ 2.18
IGHV3-23-201ENST00000390609 WDR62O43379 1518 aa28.69■■■□□ 2.18
IGHV3-23-201ENST00000390609 CEP164Q9UPV0 1460 aa28.58■■■□□ 2.17
IGHV3-23-201ENST00000390609 FANCD2Q9BXW9 1451 aa28.54■■■□□ 2.16
IGHV3-23-201ENST00000390609 OSCARQ8IYS5 282 aa28.51■■■□□ 2.15
IGHV3-23-201ENST00000390609 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
IGHV3-23-201ENST00000390609 URB2Q14146 1524 aaKnown RBP28.28■■■□□ 2.12
IGHV3-23-201ENST00000390609 TOPBP1Q92547 1522 aa28.08■■■□□ 2.09
IGHV3-23-201ENST00000390609 ABCC8Q09428 1581 aa28.08■■■□□ 2.09
IGHV3-23-201ENST00000390609 RIMBP3CA6NJZ7 1639 aa28.07■■■□□ 2.08
IGHV3-23-201ENST00000390609 RIMBP3BA6NNM3 1639 aa28.07■■■□□ 2.08
IGHV3-23-201ENST00000390609 RIMBP3Q9UFD9 1639 aa28.07■■■□□ 2.08
IGHV3-23-201ENST00000390609 DNMBPQ6XZF7 1577 aa28.05■■■□□ 2.08
IGHV3-23-201ENST00000390609 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
IGHV3-23-201ENST00000390609 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
IGHV3-23-201ENST00000390609 ARHGEF11O15085 1522 aa27.96■■■□□ 2.07
IGHV3-23-201ENST00000390609 CUX1P39880 1505 aa27.94■■■□□ 2.06
IGHV3-23-201ENST00000390609 CYB5RLQ6IPT4 315 aa27.88■■■□□ 2.05
IGHV3-23-201ENST00000390609 WRNQ14191 1432 aaPredicted RBP eCLIP27.87■■■□□ 2.05
IGHV3-23-201ENST00000390609 POLA1P09884 1462 aaPredicted RBP27.86■■■□□ 2.05
IGHV3-23-201ENST00000390609 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
IGHV3-23-201ENST00000390609 SOGA1O94964 1423 aa27.8■■■□□ 2.04
IGHV3-23-201ENST00000390609 EIF4G3O43432 1585 aaKnown RBP27.8■■■□□ 2.04
IGHV3-23-201ENST00000390609 RAD54L2Q9Y4B4 1467 aa27.78■■■□□ 2.04
IGHV3-23-201ENST00000390609 SYNJ1O43426 1573 aa27.75■■■□□ 2.03
IGHV3-23-201ENST00000390609 TRHP20396 242 aaPredicted RBP27.75■■■□□ 2.03
IGHV3-23-201ENST00000390609 AQRO60306 1485 aaKnown RBP eCLIP27.75■■■□□ 2.03
IGHV3-23-201ENST00000390609 FBLN2P98095 1184 aa27.74■■■□□ 2.03
IGHV3-23-201ENST00000390609 TOP2BQ02880 1626 aa27.72■■■□□ 2.03
IGHV3-23-201ENST00000390609 TARBP1Q13395 1621 aaKnown RBP27.72■■■□□ 2.03
IGHV3-23-201ENST00000390609 BIVM-ERCC5R4GMW8 1640 aa27.7■■■□□ 2.02
IGHV3-23-201ENST00000390609 CHD1O14646 1710 aa27.68■■■□□ 2.02
IGHV3-23-201ENST00000390609 ARAP1Q96P48 1450 aa27.64■■■□□ 2.02
IGHV3-23-201ENST00000390609 TDRD9Q8NDG6 1382 aaKnown RBP27.64■■■□□ 2.02
IGHV3-23-201ENST00000390609 ABCA10Q8WWZ4 1543 aa27.54■■■□□ 2
IGHV3-23-201ENST00000390609 WDR97A6NE52 1622 aa27.5■■□□□ 1.99
IGHV3-23-201ENST00000390609 GAPVD1Q14C86 1478 aa27.46■■□□□ 1.99
IGHV3-23-201ENST00000390609 CHMP7Q8WUX9 453 aaPredicted RBP27.44■■□□□ 1.98
IGHV3-23-201ENST00000390609 GRIN2BQ13224 1484 aa27.42■■□□□ 1.98
IGHV3-23-201ENST00000390609 SNAPC4Q5SXM2 1469 aa27.41■■□□□ 1.98
IGHV3-23-201ENST00000390609 ABCA5Q8WWZ7 1642 aa27.38■■□□□ 1.97
IGHV3-23-201ENST00000390609 CLASP1Q7Z460 1538 aa27.36■■□□□ 1.97
IGHV3-23-201ENST00000390609 PBRM1Q86U86 1689 aa27.33■■□□□ 1.97
IGHV3-23-201ENST00000390609 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
IGHV3-23-201ENST00000390609 AEBP2Q6ZN18 517 aaPredicted RBP27.29■■□□□ 1.96
IGHV3-23-201ENST00000390609 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
IGHV3-23-201ENST00000390609 SYNJ2O15056 1496 aa27.25■■□□□ 1.95
IGHV3-23-201ENST00000390609 ERICH3Q5RHP9 1530 aa27.21■■□□□ 1.95
IGHV3-23-201ENST00000390609 CHIC1Q5VXU3 224 aa27.18■■□□□ 1.94
IGHV3-23-201ENST00000390609 FHAD1B1AJZ9 1412 aa27.14■■□□□ 1.93
IGHV3-23-201ENST00000390609 ADAMTS12P58397 1594 aa27.14■■□□□ 1.93
IGHV3-23-201ENST00000390609 IGF1RP08069 1367 aa27.13■■□□□ 1.93
IGHV3-23-201ENST00000390609 RUSC2Q8N2Y8 1516 aa27.1■■□□□ 1.93
IGHV3-23-201ENST00000390609 GRIN2AQ12879 1464 aa27.06■■□□□ 1.92
IGHV3-23-201ENST00000390609 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
IGHV3-23-201ENST00000390609 CUL7Q14999 1698 aa26.99■■□□□ 1.91
IGHV3-23-201ENST00000390609 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms