RNA–Protein interactions for RNA: ENST00000555278.5

ESR2-209, Transcript of estrogen receptor 2, humanhuman

TSL 1 (best) BASIC

Gene ESR2, Length 1,883 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR2-209ENST00000555278 NISCHQ9Y2I1 1504 aa37.84■■■■□ 3.65
ESR2-209ENST00000555278 CCDC180Q9P1Z9 1646 aa33.47■■■□□ 2.95
ESR2-209ENST00000555278 ABCC9O60706 1549 aa32.16■■■□□ 2.74
ESR2-209ENST00000555278 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
ESR2-209ENST00000555278 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
ESR2-209ENST00000555278 DCAF8L2P0C7V8 631 aa31.29■■■□□ 2.6
ESR2-209ENST00000555278 NACADO15069 1562 aa31.27■■■□□ 2.6
ESR2-209ENST00000555278 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
ESR2-209ENST00000555278 RB1CC1Q8TDY2 1594 aa31.18■■■□□ 2.58
ESR2-209ENST00000555278 UNC13AQ9UPW8 1703 aa30.65■■■□□ 2.5
ESR2-209ENST00000555278 SCRIBQ14160 1630 aa30.57■■■□□ 2.48
ESR2-209ENST00000555278 BICRAQ9NZM4 1560 aa30.28■■■□□ 2.44
ESR2-209ENST00000555278 SHROOM4Q9ULL8 1493 aa30.2■■■□□ 2.42
ESR2-209ENST00000555278 PABPN1Q86U42 306 aaKnown RBP eCLIP30.1■■■□□ 2.41
ESR2-209ENST00000555278 CECR2Q9BXF3 1484 aa29.43■■■□□ 2.3
ESR2-209ENST00000555278 EIF4G1Q04637 1599 aaKnown RBP29.4■■■□□ 2.3
ESR2-209ENST00000555278 SMARCA4P51532 1647 aa29.29■■■□□ 2.28
ESR2-209ENST00000555278 BAZ1AQ9NRL2 1556 aaPredicted RBP29.29■■■□□ 2.28
ESR2-209ENST00000555278 MROH2BQ7Z745 1585 aa29.19■■■□□ 2.26
ESR2-209ENST00000555278 CC2D2AQ9P2K1 1620 aa29.16■■■□□ 2.26
ESR2-209ENST00000555278 RSF1Q96T23 1441 aaPredicted RBP29.01■■■□□ 2.23
ESR2-209ENST00000555278 DNAJC5BQ9UF47 199 aa29■■■□□ 2.23
ESR2-209ENST00000555278 PEG3Q9GZU2 1588 aa28.98■■■□□ 2.23
ESR2-209ENST00000555278 WIZO95785 1651 aa28.95■■■□□ 2.22
ESR2-209ENST00000555278 SMARCA2P51531 1590 aa28.94■■■□□ 2.22
ESR2-209ENST00000555278 ATAD2BQ9ULI0 1458 aa28.93■■■□□ 2.22
ESR2-209ENST00000555278 NCAPD3P42695 1498 aa28.82■■■□□ 2.2
ESR2-209ENST00000555278 HMGXB3Q12766 1538 aa28.78■■■□□ 2.2
ESR2-209ENST00000555278 BAZ1BQ9UIG0 1483 aaKnown RBP28.73■■■□□ 2.19
ESR2-209ENST00000555278 SUPT5HO00267 1087 aaKnown RBP28.63■■■□□ 2.17
ESR2-209ENST00000555278 TOP2AP11388 1531 aaKnown RBP28.63■■■□□ 2.17
ESR2-209ENST00000555278 CCDC88BA6NC98 1476 aa28.26■■■□□ 2.11
ESR2-209ENST00000555278 LAMC3Q9Y6N6 1575 aa28.02■■■□□ 2.08
ESR2-209ENST00000555278 NESP48681 1621 aa28.02■■■□□ 2.08
ESR2-209ENST00000555278 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
ESR2-209ENST00000555278 PRDM2Q13029 1718 aa27.97■■■□□ 2.07
ESR2-209ENST00000555278 CFTRP13569 1480 aa27.97■■■□□ 2.07
ESR2-209ENST00000555278 KIF21AQ7Z4S6 1674 aa27.79■■■□□ 2.04
ESR2-209ENST00000555278 PDS5BQ9NTI5 1447 aa27.74■■■□□ 2.03
ESR2-209ENST00000555278 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.03
ESR2-209ENST00000555278 ERCC6Q03468 1493 aa27.64■■■□□ 2.02
ESR2-209ENST00000555278 CEP164Q9UPV0 1460 aa27.62■■■□□ 2.01
ESR2-209ENST00000555278 THOC2Q8NI27 1593 aaKnown RBP27.52■■■□□ 2
ESR2-209ENST00000555278 MRC2Q9UBG0 1479 aa27.47■■□□□ 1.99
ESR2-209ENST00000555278 ABCC8Q09428 1581 aa27.45■■□□□ 1.98
ESR2-209ENST00000555278 URB2Q14146 1524 aaKnown RBP27.43■■□□□ 1.98
ESR2-209ENST00000555278 WDR62O43379 1518 aa27.39■■□□□ 1.98
ESR2-209ENST00000555278 DNMBPQ6XZF7 1577 aa27.37■■□□□ 1.97
ESR2-209ENST00000555278 CUX1P39880 1505 aa27.36■■□□□ 1.97
ESR2-209ENST00000555278 TOPBP1Q92547 1522 aa27.34■■□□□ 1.97
ESR2-209ENST00000555278 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.97
ESR2-209ENST00000555278 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
ESR2-209ENST00000555278 BIVM-ERCC5R4GMW8 1640 aa27.3■■□□□ 1.96
ESR2-209ENST00000555278 TOP2BQ02880 1626 aa27.27■■□□□ 1.96
ESR2-209ENST00000555278 CUX2O14529 1486 aa27.17■■□□□ 1.94
ESR2-209ENST00000555278 FGD5Q6ZNL6 1462 aa27.16■■□□□ 1.94
ESR2-209ENST00000555278 POLA1P09884 1462 aaPredicted RBP27.14■■□□□ 1.94
ESR2-209ENST00000555278 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
ESR2-209ENST00000555278 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
ESR2-209ENST00000555278 RAD54L2Q9Y4B4 1467 aa27.02■■□□□ 1.92
ESR2-209ENST00000555278 WDR97A6NE52 1622 aa27.01■■□□□ 1.91
ESR2-209ENST00000555278 IFT140Q96RY7 1462 aa27■■□□□ 1.91
ESR2-209ENST00000555278 TRIM41Q8WV44 630 aa27■■□□□ 1.91
ESR2-209ENST00000555278 SOGA1O94964 1423 aa26.99■■□□□ 1.91
ESR2-209ENST00000555278 ABCA10Q8WWZ4 1543 aa26.91■■□□□ 1.9
ESR2-209ENST00000555278 ZNF608Q9ULD9 1512 aaPredicted RBP26.87■■□□□ 1.89
ESR2-209ENST00000555278 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
ESR2-209ENST00000555278 ABCA5Q8WWZ7 1642 aa26.82■■□□□ 1.88
ESR2-209ENST00000555278 TDRD9Q8NDG6 1382 aaKnown RBP26.78■■□□□ 1.88
ESR2-209ENST00000555278 AQRO60306 1485 aaKnown RBP eCLIP26.76■■□□□ 1.87
ESR2-209ENST00000555278 PBRM1Q86U86 1689 aa26.75■■□□□ 1.87
ESR2-209ENST00000555278 GAPVD1Q14C86 1478 aa26.72■■□□□ 1.87
ESR2-209ENST00000555278 KIF27Q86VH2 1401 aa26.7■■□□□ 1.86
ESR2-209ENST00000555278 RUSC2Q8N2Y8 1516 aa26.69■■□□□ 1.86
ESR2-209ENST00000555278 GRIN2BQ13224 1484 aa26.63■■□□□ 1.85
ESR2-209ENST00000555278 ERICH3Q5RHP9 1530 aa26.61■■□□□ 1.85
ESR2-209ENST00000555278 SNAPC4Q5SXM2 1469 aa26.54■■□□□ 1.84
ESR2-209ENST00000555278 EEA1Q15075 1411 aa26.54■■□□□ 1.84
ESR2-209ENST00000555278 IGF1RP08069 1367 aa26.52■■□□□ 1.84
ESR2-209ENST00000555278 MAGI1Q96QZ7 1491 aaPredicted RBP26.52■■□□□ 1.84
ESR2-209ENST00000555278 CUL7Q14999 1698 aa26.51■■□□□ 1.83
ESR2-209ENST00000555278 ADAMTS12P58397 1594 aa26.51■■□□□ 1.83
ESR2-209ENST00000555278 FAM9AQ8IZU1 332 aaPredicted RBP26.45■■□□□ 1.83
ESR2-209ENST00000555278 CHD1O14646 1710 aa26.45■■□□□ 1.82
ESR2-209ENST00000555278 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
ESR2-209ENST00000555278 SYNJ2O15056 1496 aa26.4■■□□□ 1.82
ESR2-209ENST00000555278 CSRNP3Q8WYN3 585 aa26.4■■□□□ 1.82
ESR2-209ENST00000555278 CARMIL1Q5VZK9 1371 aa26.37■■□□□ 1.81
ESR2-209ENST00000555278 PRXQ9BXM0 1461 aa26.35■■□□□ 1.81
ESR2-209ENST00000555278 GRIN2AQ12879 1464 aa26.31■■□□□ 1.8
ESR2-209ENST00000555278 KIF21BO75037 1637 aa26.31■■□□□ 1.8
ESR2-209ENST00000555278 RAPGEF2Q9Y4G8 1499 aa26.3■■□□□ 1.8
ESR2-209ENST00000555278 CHMP7Q8WUX9 453 aaPredicted RBP26.28■■□□□ 1.8
ESR2-209ENST00000555278 FBLN2P98095 1184 aa26.28■■□□□ 1.8
ESR2-209ENST00000555278 CEP170Q5SW79 1584 aa26.21■■□□□ 1.79
ESR2-209ENST00000555278 NUP160Q12769 1436 aa26.17■■□□□ 1.78
ESR2-209ENST00000555278 CTTNBP2Q8WZ74 1663 aa26.15■■□□□ 1.78
ESR2-209ENST00000555278 GOLGA3Q08378 1498 aa26.14■■□□□ 1.78
ESR2-209ENST00000555278 CLASP1Q7Z460 1538 aa26.1■■□□□ 1.77
ESR2-209ENST00000555278 OSCARQ8IYS5 282 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms