RNA–Protein interactions for RNA: ENST00000623205.2

C11orf71-202, Transcript of chromosome 11 open reading frame 71, humanhuman

APPRIS ALT2 BASIC

Gene C11orf71, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf71-202ENST00000623205 NISCHQ9Y2I1 1504 aa35.78■■■■□ 3.32
C11orf71-202ENST00000623205 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.6
C11orf71-202ENST00000623205 ZCCHC6Q5VYS8 1495 aaKnown RBP30.01■■■□□ 2.39
C11orf71-202ENST00000623205 ABCC9O60706 1549 aa29.73■■■□□ 2.35
C11orf71-202ENST00000623205 DCAF1Q9Y4B6 1507 aa29.58■■■□□ 2.33
C11orf71-202ENST00000623205 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
C11orf71-202ENST00000623205 MYO15BQ96JP2 1530 aa29.29■■■□□ 2.28
C11orf71-202ENST00000623205 NACADO15069 1562 aa29.18■■■□□ 2.26
C11orf71-202ENST00000623205 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
C11orf71-202ENST00000623205 RB1CC1Q8TDY2 1594 aa28.97■■■□□ 2.23
C11orf71-202ENST00000623205 SCRIBQ14160 1630 aa28.76■■■□□ 2.19
C11orf71-202ENST00000623205 UNC13AQ9UPW8 1703 aa28.51■■■□□ 2.15
C11orf71-202ENST00000623205 BICRAQ9NZM4 1560 aa28.15■■■□□ 2.1
C11orf71-202ENST00000623205 PABPN1Q86U42 306 aaKnown RBP eCLIP28■■■□□ 2.07
C11orf71-202ENST00000623205 CECR2Q9BXF3 1484 aa27.83■■■□□ 2.05
C11orf71-202ENST00000623205 SUPT5HO00267 1087 aaKnown RBP27.83■■■□□ 2.05
C11orf71-202ENST00000623205 RSF1Q96T23 1441 aaPredicted RBP27.68■■■□□ 2.02
C11orf71-202ENST00000623205 MROH2BQ7Z745 1585 aa27.65■■■□□ 2.02
C11orf71-202ENST00000623205 BAZ1AQ9NRL2 1556 aaPredicted RBP27.63■■■□□ 2.01
C11orf71-202ENST00000623205 SMARCA4P51532 1647 aa27.57■■■□□ 2
C11orf71-202ENST00000623205 WIZO95785 1651 aa27.45■■□□□ 1.98
C11orf71-202ENST00000623205 EIF4G1Q04637 1599 aaKnown RBP27.28■■□□□ 1.96
C11orf71-202ENST00000623205 PEG3Q9GZU2 1588 aa27.23■■□□□ 1.95
C11orf71-202ENST00000623205 ATAD2BQ9ULI0 1458 aa27.13■■□□□ 1.93
C11orf71-202ENST00000623205 TOP2AP11388 1531 aaKnown RBP27.11■■□□□ 1.93
C11orf71-202ENST00000623205 SMARCA2P51531 1590 aa27.1■■□□□ 1.93
C11orf71-202ENST00000623205 BAZ1BQ9UIG0 1483 aaKnown RBP26.95■■□□□ 1.9
C11orf71-202ENST00000623205 CC2D2AQ9P2K1 1620 aa26.94■■□□□ 1.9
C11orf71-202ENST00000623205 NCAPD3P42695 1498 aa26.92■■□□□ 1.9
C11orf71-202ENST00000623205 HMGXB3Q12766 1538 aa26.87■■□□□ 1.89
C11orf71-202ENST00000623205 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
C11orf71-202ENST00000623205 CHIC1Q5VXU3 224 aa26.57■■□□□ 1.84
C11orf71-202ENST00000623205 DNAJC5BQ9UF47 199 aa26.42■■□□□ 1.82
C11orf71-202ENST00000623205 CFTRP13569 1480 aa26.27■■□□□ 1.8
C11orf71-202ENST00000623205 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
C11orf71-202ENST00000623205 PRDM2Q13029 1718 aa26.22■■□□□ 1.79
C11orf71-202ENST00000623205 CADPSQ9ULU8 1353 aa26.21■■□□□ 1.79
C11orf71-202ENST00000623205 TRIM41Q8WV44 630 aa26.17■■□□□ 1.78
C11orf71-202ENST00000623205 NESP48681 1621 aa26.08■■□□□ 1.76
C11orf71-202ENST00000623205 LAMC3Q9Y6N6 1575 aa26.05■■□□□ 1.76
C11orf71-202ENST00000623205 WRNQ14191 1432 aaPredicted RBP eCLIP26.04■■□□□ 1.76
C11orf71-202ENST00000623205 SYNJ1O43426 1573 aa25.99■■□□□ 1.75
C11orf71-202ENST00000623205 FANCD2Q9BXW9 1451 aa25.93■■□□□ 1.74
C11orf71-202ENST00000623205 TOP2BQ02880 1626 aa25.89■■□□□ 1.73
C11orf71-202ENST00000623205 BIVM-ERCC5R4GMW8 1640 aa25.89■■□□□ 1.73
C11orf71-202ENST00000623205 CUX1P39880 1505 aa25.86■■□□□ 1.73
C11orf71-202ENST00000623205 PDS5BQ9NTI5 1447 aa25.81■■□□□ 1.72
C11orf71-202ENST00000623205 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
C11orf71-202ENST00000623205 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
C11orf71-202ENST00000623205 FAM9AQ8IZU1 332 aaPredicted RBP25.7■■□□□ 1.7
C11orf71-202ENST00000623205 SOGA1O94964 1423 aa25.68■■□□□ 1.7
C11orf71-202ENST00000623205 DNMBPQ6XZF7 1577 aa25.68■■□□□ 1.7
C11orf71-202ENST00000623205 TOPBP1Q92547 1522 aa25.64■■□□□ 1.7
C11orf71-202ENST00000623205 URB2Q14146 1524 aaKnown RBP25.64■■□□□ 1.69
C11orf71-202ENST00000623205 RUSC2Q8N2Y8 1516 aa25.63■■□□□ 1.69
C11orf71-202ENST00000623205 FGD5Q6ZNL6 1462 aa25.59■■□□□ 1.69
C11orf71-202ENST00000623205 LOC105371045A0A1W2PR82 267 aa25.56■■□□□ 1.68
C11orf71-202ENST00000623205 EEA1Q15075 1411 aa25.55■■□□□ 1.68
C11orf71-202ENST00000623205 MRC2Q9UBG0 1479 aa25.51■■□□□ 1.67
C11orf71-202ENST00000623205 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
C11orf71-202ENST00000623205 ERCC6Q03468 1493 aa25.47■■□□□ 1.67
C11orf71-202ENST00000623205 CSRNP3Q8WYN3 585 aa25.45■■□□□ 1.66
C11orf71-202ENST00000623205 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
C11orf71-202ENST00000623205 WDR62O43379 1518 aa25.41■■□□□ 1.66
C11orf71-202ENST00000623205 THOC2Q8NI27 1593 aaKnown RBP25.4■■□□□ 1.66
C11orf71-202ENST00000623205 KIF27Q86VH2 1401 aa25.38■■□□□ 1.65
C11orf71-202ENST00000623205 CUX2O14529 1486 aa25.37■■□□□ 1.65
C11orf71-202ENST00000623205 ABCA10Q8WWZ4 1543 aa25.36■■□□□ 1.65
C11orf71-202ENST00000623205 WDR97A6NE52 1622 aa25.35■■□□□ 1.65
C11orf71-202ENST00000623205 EHMT2Q96KQ7 1210 aa25.35■■□□□ 1.65
C11orf71-202ENST00000623205 TARBP1Q13395 1621 aaKnown RBP25.31■■□□□ 1.64
C11orf71-202ENST00000623205 KIF21BO75037 1637 aa25.28■■□□□ 1.64
C11orf71-202ENST00000623205 IGF1RP08069 1367 aa25.21■■□□□ 1.63
C11orf71-202ENST00000623205 GOLGA3Q08378 1498 aa25.2■■□□□ 1.62
C11orf71-202ENST00000623205 ABCA5Q8WWZ7 1642 aa25.2■■□□□ 1.62
C11orf71-202ENST00000623205 PRXQ9BXM0 1461 aa25.2■■□□□ 1.62
C11orf71-202ENST00000623205 TDRD9Q8NDG6 1382 aaKnown RBP25.17■■□□□ 1.62
C11orf71-202ENST00000623205 IFT140Q96RY7 1462 aa25.16■■□□□ 1.62
C11orf71-202ENST00000623205 RAPGEF2Q9Y4G8 1499 aa25.16■■□□□ 1.62
C11orf71-202ENST00000623205 ERICH3Q5RHP9 1530 aa25.13■■□□□ 1.61
C11orf71-202ENST00000623205 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
C11orf71-202ENST00000623205 TNIKQ9UKE5 1360 aa25.09■■□□□ 1.61
C11orf71-202ENST00000623205 UBTFP17480 764 aaKnown RBP25.09■■□□□ 1.61
C11orf71-202ENST00000623205 ZNF608Q9ULD9 1512 aaPredicted RBP25.07■■□□□ 1.6
C11orf71-202ENST00000623205 PBRM1Q86U86 1689 aa25.06■■□□□ 1.6
C11orf71-202ENST00000623205 CARMIL1Q5VZK9 1371 aa25.06■■□□□ 1.6
C11orf71-202ENST00000623205 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.6
C11orf71-202ENST00000623205 CUL7Q14999 1698 aa25.05■■□□□ 1.6
C11orf71-202ENST00000623205 EIF4G3O43432 1585 aaKnown RBP24.99■■□□□ 1.59
C11orf71-202ENST00000623205 CEP162Q5TB80 1403 aa24.95■■□□□ 1.58
C11orf71-202ENST00000623205 GRIN2BQ13224 1484 aa24.94■■□□□ 1.58
C11orf71-202ENST00000623205 ADAMTS12P58397 1594 aa24.87■■□□□ 1.57
C11orf71-202ENST00000623205 FHAD1B1AJZ9 1412 aa24.83■■□□□ 1.57
C11orf71-202ENST00000623205 SNAPC4Q5SXM2 1469 aa24.81■■□□□ 1.56
C11orf71-202ENST00000623205 CLIP1P30622 1438 aa24.79■■□□□ 1.56
C11orf71-202ENST00000623205 CTTNBP2Q8WZ74 1663 aa24.79■■□□□ 1.56
C11orf71-202ENST00000623205 MAGI1Q96QZ7 1491 aaPredicted RBP24.75■■□□□ 1.55
C11orf71-202ENST00000623205 RANGAP1P46060 587 aaPredicted RBP24.74■■□□□ 1.55
C11orf71-202ENST00000623205 SYNJ2O15056 1496 aa24.66■■□□□ 1.54
C11orf71-202ENST00000623205 GRIN2AQ12879 1464 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms