RNA–Protein interactions for RNA: ENST00000512306.5

GATB-209, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 1 (best) BASIC

Gene GATB, Length 1,519 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-209ENST00000512306 NISCHQ9Y2I1 1504 aa39.89■■■■□ 3.98
GATB-209ENST00000512306 CCDC180Q9P1Z9 1646 aa35.57■■■■□ 3.28
GATB-209ENST00000512306 ABCC9O60706 1549 aa34.66■■■■□ 3.14
GATB-209ENST00000512306 RB1CC1Q8TDY2 1594 aa33.46■■■□□ 2.95
GATB-209ENST00000512306 NACADO15069 1562 aa33.44■■■□□ 2.94
GATB-209ENST00000512306 MYO15BQ96JP2 1530 aa33.31■■■□□ 2.92
GATB-209ENST00000512306 ZCCHC6Q5VYS8 1495 aaKnown RBP33.23■■■□□ 2.91
GATB-209ENST00000512306 DCAF8L2P0C7V8 631 aa33.18■■■□□ 2.9
GATB-209ENST00000512306 DCAF1Q9Y4B6 1507 aa33.12■■■□□ 2.89
GATB-209ENST00000512306 UNC13AQ9UPW8 1703 aa32.63■■■□□ 2.81
GATB-209ENST00000512306 BICRAQ9NZM4 1560 aa32.38■■■□□ 2.77
GATB-209ENST00000512306 PABPN1Q86U42 306 aaKnown RBP eCLIP32.32■■■□□ 2.76
GATB-209ENST00000512306 SCRIBQ14160 1630 aa32.28■■■□□ 2.76
GATB-209ENST00000512306 SHROOM4Q9ULL8 1493 aa32.24■■■□□ 2.75
GATB-209ENST00000512306 DNAJC5BQ9UF47 199 aa31.79■■■□□ 2.68
GATB-209ENST00000512306 EIF4G1Q04637 1599 aaKnown RBP31.55■■■□□ 2.64
GATB-209ENST00000512306 CC2D2AQ9P2K1 1620 aa31.41■■■□□ 2.62
GATB-209ENST00000512306 CECR2Q9BXF3 1484 aa31.21■■■□□ 2.59
GATB-209ENST00000512306 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
GATB-209ENST00000512306 SMARCA4P51532 1647 aa30.96■■■□□ 2.55
GATB-209ENST00000512306 NCAPD3P42695 1498 aa30.84■■■□□ 2.53
GATB-209ENST00000512306 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
GATB-209ENST00000512306 ATAD2BQ9ULI0 1458 aa30.79■■■□□ 2.52
GATB-209ENST00000512306 PEG3Q9GZU2 1588 aa30.74■■■□□ 2.51
GATB-209ENST00000512306 HMGXB3Q12766 1538 aa30.7■■■□□ 2.51
GATB-209ENST00000512306 MROH2BQ7Z745 1585 aa30.67■■■□□ 2.5
GATB-209ENST00000512306 BAZ1BQ9UIG0 1483 aaKnown RBP30.54■■■□□ 2.48
GATB-209ENST00000512306 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
GATB-209ENST00000512306 WIZO95785 1651 aa30.33■■■□□ 2.45
GATB-209ENST00000512306 TOP2AP11388 1531 aaKnown RBP30.09■■■□□ 2.41
GATB-209ENST00000512306 LAMC3Q9Y6N6 1575 aa30.04■■■□□ 2.4
GATB-209ENST00000512306 NESP48681 1621 aa29.96■■■□□ 2.39
GATB-209ENST00000512306 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
GATB-209ENST00000512306 CADPSQ9ULU8 1353 aa29.91■■■□□ 2.38
GATB-209ENST00000512306 PDS5BQ9NTI5 1447 aa29.83■■■□□ 2.37
GATB-209ENST00000512306 CFTRP13569 1480 aa29.74■■■□□ 2.35
GATB-209ENST00000512306 CUX2O14529 1486 aa29.73■■■□□ 2.35
GATB-209ENST00000512306 CCDC88BA6NC98 1476 aa29.68■■■□□ 2.34
GATB-209ENST00000512306 KIF21AQ7Z4S6 1674 aa29.66■■■□□ 2.34
GATB-209ENST00000512306 THOC2Q8NI27 1593 aaKnown RBP29.61■■■□□ 2.33
GATB-209ENST00000512306 FANCD2Q9BXW9 1451 aa29.54■■■□□ 2.32
GATB-209ENST00000512306 PRDM2Q13029 1718 aa29.53■■■□□ 2.32
GATB-209ENST00000512306 CEP164Q9UPV0 1460 aa29.52■■■□□ 2.32
GATB-209ENST00000512306 MRC2Q9UBG0 1479 aa29.49■■■□□ 2.31
GATB-209ENST00000512306 WDR62O43379 1518 aa29.42■■■□□ 2.3
GATB-209ENST00000512306 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
GATB-209ENST00000512306 URB2Q14146 1524 aaKnown RBP29.21■■■□□ 2.27
GATB-209ENST00000512306 ABCC8Q09428 1581 aa29.17■■■□□ 2.26
GATB-209ENST00000512306 TOPBP1Q92547 1522 aa29.06■■■□□ 2.24
GATB-209ENST00000512306 DNMBPQ6XZF7 1577 aa29.06■■■□□ 2.24
GATB-209ENST00000512306 IFT140Q96RY7 1462 aa28.93■■■□□ 2.22
GATB-209ENST00000512306 POLA1P09884 1462 aaPredicted RBP28.81■■■□□ 2.2
GATB-209ENST00000512306 CUX1P39880 1505 aa28.79■■■□□ 2.2
GATB-209ENST00000512306 DNAJC5Q9H3Z4 198 aa28.79■■■□□ 2.2
GATB-209ENST00000512306 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.19
GATB-209ENST00000512306 FGD5Q6ZNL6 1462 aa28.71■■■□□ 2.19
GATB-209ENST00000512306 ZNF608Q9ULD9 1512 aaPredicted RBP28.69■■■□□ 2.18
GATB-209ENST00000512306 SOGA1O94964 1423 aa28.68■■■□□ 2.18
GATB-209ENST00000512306 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
GATB-209ENST00000512306 EIF4G3O43432 1585 aaKnown RBP28.64■■■□□ 2.17
GATB-209ENST00000512306 WRNQ14191 1432 aaPredicted RBP eCLIP28.63■■■□□ 2.17
GATB-209ENST00000512306 RAD54L2Q9Y4B4 1467 aa28.61■■■□□ 2.17
GATB-209ENST00000512306 TOP2BQ02880 1626 aa28.6■■■□□ 2.17
GATB-209ENST00000512306 BIVM-ERCC5R4GMW8 1640 aa28.59■■■□□ 2.17
GATB-209ENST00000512306 AQRO60306 1485 aaKnown RBP eCLIP28.53■■■□□ 2.16
GATB-209ENST00000512306 SYNJ1O43426 1573 aa28.51■■■□□ 2.15
GATB-209ENST00000512306 ABCA10Q8WWZ4 1543 aa28.5■■■□□ 2.15
GATB-209ENST00000512306 TDRD9Q8NDG6 1382 aaKnown RBP28.47■■■□□ 2.15
GATB-209ENST00000512306 OSCARQ8IYS5 282 aa28.43■■■□□ 2.14
GATB-209ENST00000512306 GRIN2BQ13224 1484 aa28.39■■■□□ 2.14
GATB-209ENST00000512306 GAPVD1Q14C86 1478 aa28.37■■■□□ 2.13
GATB-209ENST00000512306 ABCA5Q8WWZ7 1642 aa28.37■■■□□ 2.13
GATB-209ENST00000512306 MAGI1Q96QZ7 1491 aaPredicted RBP28.35■■■□□ 2.13
GATB-209ENST00000512306 PBRM1Q86U86 1689 aa28.3■■■□□ 2.12
GATB-209ENST00000512306 SNAPC4Q5SXM2 1469 aa28.29■■■□□ 2.12
GATB-209ENST00000512306 CHD1O14646 1710 aa28.27■■■□□ 2.12
GATB-209ENST00000512306 SYNJ2O15056 1496 aa28.22■■■□□ 2.11
GATB-209ENST00000512306 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
GATB-209ENST00000512306 FBLN2P98095 1184 aa28.17■■■□□ 2.1
GATB-209ENST00000512306 CHMP7Q8WUX9 453 aaPredicted RBP28.16■■■□□ 2.1
GATB-209ENST00000512306 ADAMTS12P58397 1594 aa28.09■■■□□ 2.09
GATB-209ENST00000512306 FHAD1B1AJZ9 1412 aa28.07■■■□□ 2.08
GATB-209ENST00000512306 KIF27Q86VH2 1401 aa28.07■■■□□ 2.08
GATB-209ENST00000512306 GRIN2AQ12879 1464 aa28.01■■■□□ 2.07
GATB-209ENST00000512306 CLASP1Q7Z460 1538 aa28.01■■■□□ 2.07
GATB-209ENST00000512306 ARHGEF11O15085 1522 aa27.95■■■□□ 2.07
GATB-209ENST00000512306 RIMBP3CA6NJZ7 1639 aa27.93■■■□□ 2.06
GATB-209ENST00000512306 RIMBP3BA6NNM3 1639 aa27.93■■■□□ 2.06
GATB-209ENST00000512306 RIMBP3Q9UFD9 1639 aa27.93■■■□□ 2.06
GATB-209ENST00000512306 CUL7Q14999 1698 aa27.91■■■□□ 2.06
GATB-209ENST00000512306 NUP160Q12769 1436 aa27.91■■■□□ 2.06
GATB-209ENST00000512306 IGF1RP08069 1367 aa27.91■■■□□ 2.06
GATB-209ENST00000512306 TRIM41Q8WV44 630 aa27.87■■■□□ 2.05
GATB-209ENST00000512306 CEP170Q5SW79 1584 aa27.84■■■□□ 2.05
GATB-209ENST00000512306 CARMIL1Q5VZK9 1371 aa27.75■■■□□ 2.03
GATB-209ENST00000512306 SHROOM2Q13796 1616 aa27.71■■■□□ 2.03
GATB-209ENST00000512306 ARAP1Q96P48 1450 aa27.69■■■□□ 2.02
GATB-209ENST00000512306 RUSC2Q8N2Y8 1516 aa27.67■■■□□ 2.02
GATB-209ENST00000512306 KIAA0586Q9BVV6 1533 aa27.64■■■□□ 2.02
GATB-209ENST00000512306 CYB5RLQ6IPT4 315 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms