RNA–Protein interactions for RNA: ENST00000543586.1

TRIM62-204, Transcript of tripartite motif containing 62, humanhuman

TSL 2 BASIC

Gene TRIM62, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62-204ENST00000543586 NISCHQ9Y2I1 1504 aa35.32■■■■□ 3.24
TRIM62-204ENST00000543586 CCDC180Q9P1Z9 1646 aa30.83■■■□□ 2.53
TRIM62-204ENST00000543586 ZCCHC6Q5VYS8 1495 aaKnown RBP29.67■■■□□ 2.34
TRIM62-204ENST00000543586 ABCC9O60706 1549 aa29.2■■■□□ 2.26
TRIM62-204ENST00000543586 DCAF1Q9Y4B6 1507 aa29.17■■■□□ 2.26
TRIM62-204ENST00000543586 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.26
TRIM62-204ENST00000543586 SHROOM4Q9ULL8 1493 aa28.82■■■□□ 2.2
TRIM62-204ENST00000543586 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
TRIM62-204ENST00000543586 NACADO15069 1562 aa28.68■■■□□ 2.18
TRIM62-204ENST00000543586 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
TRIM62-204ENST00000543586 SCRIBQ14160 1630 aa28.38■■■□□ 2.13
TRIM62-204ENST00000543586 UNC13AQ9UPW8 1703 aa28.05■■■□□ 2.08
TRIM62-204ENST00000543586 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
TRIM62-204ENST00000543586 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
TRIM62-204ENST00000543586 PABPN1Q86U42 306 aaKnown RBP eCLIP27.52■■■□□ 2
TRIM62-204ENST00000543586 CECR2Q9BXF3 1484 aa27.49■■□□□ 1.99
TRIM62-204ENST00000543586 RSF1Q96T23 1441 aaPredicted RBP27.38■■□□□ 1.97
TRIM62-204ENST00000543586 MROH2BQ7Z745 1585 aa27.32■■□□□ 1.96
TRIM62-204ENST00000543586 BAZ1AQ9NRL2 1556 aaPredicted RBP27.25■■□□□ 1.95
TRIM62-204ENST00000543586 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
TRIM62-204ENST00000543586 WIZO95785 1651 aa27.13■■□□□ 1.93
TRIM62-204ENST00000543586 PEG3Q9GZU2 1588 aa26.82■■□□□ 1.88
TRIM62-204ENST00000543586 EIF4G1Q04637 1599 aaKnown RBP26.8■■□□□ 1.88
TRIM62-204ENST00000543586 TOP2AP11388 1531 aaKnown RBP26.78■■□□□ 1.88
TRIM62-204ENST00000543586 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
TRIM62-204ENST00000543586 SMARCA2P51531 1590 aa26.68■■□□□ 1.86
TRIM62-204ENST00000543586 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
TRIM62-204ENST00000543586 CCDC88BA6NC98 1476 aa26.52■■□□□ 1.84
TRIM62-204ENST00000543586 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
TRIM62-204ENST00000543586 NCAPD3P42695 1498 aa26.46■■□□□ 1.83
TRIM62-204ENST00000543586 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
TRIM62-204ENST00000543586 CC2D2AQ9P2K1 1620 aa26.43■■□□□ 1.82
TRIM62-204ENST00000543586 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
TRIM62-204ENST00000543586 TRIM41Q8WV44 630 aa25.97■■□□□ 1.75
TRIM62-204ENST00000543586 CFTRP13569 1480 aa25.87■■□□□ 1.73
TRIM62-204ENST00000543586 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
TRIM62-204ENST00000543586 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
TRIM62-204ENST00000543586 CADPSQ9ULU8 1353 aa25.78■■□□□ 1.72
TRIM62-204ENST00000543586 WRNQ14191 1432 aaPredicted RBP eCLIP25.75■■□□□ 1.71
TRIM62-204ENST00000543586 SYNJ1O43426 1573 aa25.72■■□□□ 1.71
TRIM62-204ENST00000543586 NESP48681 1621 aa25.65■■□□□ 1.7
TRIM62-204ENST00000543586 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
TRIM62-204ENST00000543586 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
TRIM62-204ENST00000543586 BIVM-ERCC5R4GMW8 1640 aa25.59■■□□□ 1.69
TRIM62-204ENST00000543586 FAM9AQ8IZU1 332 aaPredicted RBP25.55■■□□□ 1.68
TRIM62-204ENST00000543586 CUX1P39880 1505 aa25.54■■□□□ 1.68
TRIM62-204ENST00000543586 FANCD2Q9BXW9 1451 aa25.52■■□□□ 1.68
TRIM62-204ENST00000543586 LOC105371045A0A1W2PR82 267 aa25.48■■□□□ 1.67
TRIM62-204ENST00000543586 SOGA1O94964 1423 aa25.46■■□□□ 1.67
TRIM62-204ENST00000543586 RUSC2Q8N2Y8 1516 aa25.41■■□□□ 1.66
TRIM62-204ENST00000543586 KIF21AQ7Z4S6 1674 aa25.38■■□□□ 1.65
TRIM62-204ENST00000543586 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
TRIM62-204ENST00000543586 PDS5BQ9NTI5 1447 aa25.34■■□□□ 1.65
TRIM62-204ENST00000543586 EEA1Q15075 1411 aa25.32■■□□□ 1.64
TRIM62-204ENST00000543586 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
TRIM62-204ENST00000543586 TOPBP1Q92547 1522 aa25.26■■□□□ 1.63
TRIM62-204ENST00000543586 FGD5Q6ZNL6 1462 aa25.25■■□□□ 1.63
TRIM62-204ENST00000543586 URB2Q14146 1524 aaKnown RBP25.24■■□□□ 1.63
TRIM62-204ENST00000543586 EHMT2Q96KQ7 1210 aa25.23■■□□□ 1.63
TRIM62-204ENST00000543586 CSRNP3Q8WYN3 585 aa25.21■■□□□ 1.63
TRIM62-204ENST00000543586 POLA1P09884 1462 aaPredicted RBP25.14■■□□□ 1.61
TRIM62-204ENST00000543586 KIF27Q86VH2 1401 aa25.08■■□□□ 1.6
TRIM62-204ENST00000543586 KIF21BO75037 1637 aa25.07■■□□□ 1.6
TRIM62-204ENST00000543586 RAD54L2Q9Y4B4 1467 aa25.07■■□□□ 1.6
TRIM62-204ENST00000543586 CUX2O14529 1486 aa25.07■■□□□ 1.6
TRIM62-204ENST00000543586 MRC2Q9UBG0 1479 aa25.07■■□□□ 1.6
TRIM62-204ENST00000543586 GOLGA3Q08378 1498 aa25.01■■□□□ 1.59
TRIM62-204ENST00000543586 WDR97A6NE52 1622 aa25.01■■□□□ 1.59
TRIM62-204ENST00000543586 ABCA10Q8WWZ4 1543 aa25.01■■□□□ 1.59
TRIM62-204ENST00000543586 ERCC6Q03468 1493 aa24.99■■□□□ 1.59
TRIM62-204ENST00000543586 WDR62O43379 1518 aa24.95■■□□□ 1.59
TRIM62-204ENST00000543586 PRXQ9BXM0 1461 aa24.94■■□□□ 1.58
TRIM62-204ENST00000543586 RAPGEF2Q9Y4G8 1499 aa24.94■■□□□ 1.58
TRIM62-204ENST00000543586 THOC2Q8NI27 1593 aaKnown RBP24.94■■□□□ 1.58
TRIM62-204ENST00000543586 TNIKQ9UKE5 1360 aa24.92■■□□□ 1.58
TRIM62-204ENST00000543586 TARBP1Q13395 1621 aaKnown RBP24.91■■□□□ 1.58
TRIM62-204ENST00000543586 IGF1RP08069 1367 aa24.89■■□□□ 1.57
TRIM62-204ENST00000543586 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
TRIM62-204ENST00000543586 UBTFP17480 764 aaKnown RBP24.87■■□□□ 1.57
TRIM62-204ENST00000543586 ABCA5Q8WWZ7 1642 aa24.85■■□□□ 1.57
TRIM62-204ENST00000543586 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
TRIM62-204ENST00000543586 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
TRIM62-204ENST00000543586 CARMIL1Q5VZK9 1371 aa24.75■■□□□ 1.55
TRIM62-204ENST00000543586 GAPVD1Q14C86 1478 aa24.75■■□□□ 1.55
TRIM62-204ENST00000543586 IFT140Q96RY7 1462 aa24.74■■□□□ 1.55
TRIM62-204ENST00000543586 CUL7Q14999 1698 aa24.73■■□□□ 1.55
TRIM62-204ENST00000543586 PBRM1Q86U86 1689 aa24.71■■□□□ 1.55
TRIM62-204ENST00000543586 ZNF608Q9ULD9 1512 aaPredicted RBP24.67■■□□□ 1.54
TRIM62-204ENST00000543586 AQRO60306 1485 aaKnown RBP eCLIP24.66■■□□□ 1.54
TRIM62-204ENST00000543586 CLIP1P30622 1438 aa24.61■■□□□ 1.53
TRIM62-204ENST00000543586 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
TRIM62-204ENST00000543586 GRIN2BQ13224 1484 aa24.55■■□□□ 1.52
TRIM62-204ENST00000543586 RANGAP1P46060 587 aaPredicted RBP24.53■■□□□ 1.52
TRIM62-204ENST00000543586 ADAMTS12P58397 1594 aa24.52■■□□□ 1.52
TRIM62-204ENST00000543586 CTTNBP2Q8WZ74 1663 aa24.5■■□□□ 1.51
TRIM62-204ENST00000543586 FHAD1B1AJZ9 1412 aa24.47■■□□□ 1.51
TRIM62-204ENST00000543586 SNAPC4Q5SXM2 1469 aa24.44■■□□□ 1.5
TRIM62-204ENST00000543586 ARAP1Q96P48 1450 aa24.43■■□□□ 1.5
TRIM62-204ENST00000543586 ARHGAP35Q9NRY4 1499 aa24.41■■□□□ 1.5
TRIM62-204ENST00000543586 VPS8Q8N3P4 1428 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms