RNA–Protein interactions for RNA: ENST00000638338.1

SLC35A3-209, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5 BASIC

Gene SLC35A3, Length 2,890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-209ENST00000638338 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.88
SLC35A3-209ENST00000638338 CCDC180Q9P1Z9 1646 aa28.52■■■□□ 2.16
SLC35A3-209ENST00000638338 ZCCHC6Q5VYS8 1495 aaKnown RBP27.88■■■□□ 2.05
SLC35A3-209ENST00000638338 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
SLC35A3-209ENST00000638338 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
SLC35A3-209ENST00000638338 DCAF8L2P0C7V8 631 aa27.23■■□□□ 1.95
SLC35A3-209ENST00000638338 ABCC9O60706 1549 aa26.81■■□□□ 1.88
SLC35A3-209ENST00000638338 MYO15BQ96JP2 1530 aa26.77■■□□□ 1.88
SLC35A3-209ENST00000638338 SUPT5HO00267 1087 aaKnown RBP26.67■■□□□ 1.86
SLC35A3-209ENST00000638338 NACADO15069 1562 aa26.47■■□□□ 1.83
SLC35A3-209ENST00000638338 SCRIBQ14160 1630 aa26.38■■□□□ 1.81
SLC35A3-209ENST00000638338 RB1CC1Q8TDY2 1594 aa26.15■■□□□ 1.78
SLC35A3-209ENST00000638338 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
SLC35A3-209ENST00000638338 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
SLC35A3-209ENST00000638338 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.7
SLC35A3-209ENST00000638338 UNC13AQ9UPW8 1703 aa25.62■■□□□ 1.69
SLC35A3-209ENST00000638338 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
SLC35A3-209ENST00000638338 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
SLC35A3-209ENST00000638338 WIZO95785 1651 aa25.41■■□□□ 1.66
SLC35A3-209ENST00000638338 BICRAQ9NZM4 1560 aa25.36■■□□□ 1.65
SLC35A3-209ENST00000638338 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
SLC35A3-209ENST00000638338 PABPN1Q86U42 306 aaKnown RBP eCLIP25.23■■□□□ 1.63
SLC35A3-209ENST00000638338 TOP2AP11388 1531 aaKnown RBP25.13■■□□□ 1.61
SLC35A3-209ENST00000638338 TRIM41Q8WV44 630 aa25.01■■□□□ 1.59
SLC35A3-209ENST00000638338 PEG3Q9GZU2 1588 aa24.95■■□□□ 1.58
SLC35A3-209ENST00000638338 EIF4G1Q04637 1599 aaKnown RBP24.93■■□□□ 1.58
SLC35A3-209ENST00000638338 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
SLC35A3-209ENST00000638338 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
SLC35A3-209ENST00000638338 LOC105371045A0A1W2PR82 267 aa24.86■■□□□ 1.57
SLC35A3-209ENST00000638338 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
SLC35A3-209ENST00000638338 BAZ1BQ9UIG0 1483 aaKnown RBP24.65■■□□□ 1.54
SLC35A3-209ENST00000638338 FAM9AQ8IZU1 332 aaPredicted RBP24.6■■□□□ 1.53
SLC35A3-209ENST00000638338 ABCC8Q09428 1581 aa24.58■■□□□ 1.53
SLC35A3-209ENST00000638338 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
SLC35A3-209ENST00000638338 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
SLC35A3-209ENST00000638338 NCAPD3P42695 1498 aa24.46■■□□□ 1.51
SLC35A3-209ENST00000638338 HMGXB3Q12766 1538 aa24.44■■□□□ 1.5
SLC35A3-209ENST00000638338 WRNQ14191 1432 aaPredicted RBP eCLIP24.34■■□□□ 1.49
SLC35A3-209ENST00000638338 PCGF6Q9BYE7 350 aa24.28■■□□□ 1.48
SLC35A3-209ENST00000638338 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
SLC35A3-209ENST00000638338 EEA1Q15075 1411 aa24.25■■□□□ 1.47
SLC35A3-209ENST00000638338 SOGA1O94964 1423 aa24.24■■□□□ 1.47
SLC35A3-209ENST00000638338 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
SLC35A3-209ENST00000638338 RUSC2Q8N2Y8 1516 aa24.13■■□□□ 1.45
SLC35A3-209ENST00000638338 TRIM26Q12899 539 aaPredicted RBP24.12■■□□□ 1.45
SLC35A3-209ENST00000638338 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
SLC35A3-209ENST00000638338 CFTRP13569 1480 aa24.07■■□□□ 1.44
SLC35A3-209ENST00000638338 TOP2BQ02880 1626 aa24.06■■□□□ 1.44
SLC35A3-209ENST00000638338 BIVM-ERCC5R4GMW8 1640 aa24.01■■□□□ 1.43
SLC35A3-209ENST00000638338 HRCP23327 699 aa24.01■■□□□ 1.43
SLC35A3-209ENST00000638338 TNIKQ9UKE5 1360 aa24■■□□□ 1.43
SLC35A3-209ENST00000638338 GOLGA3Q08378 1498 aa23.96■■□□□ 1.43
SLC35A3-209ENST00000638338 PRDM2Q13029 1718 aa23.92■■□□□ 1.42
SLC35A3-209ENST00000638338 CEP162Q5TB80 1403 aa23.91■■□□□ 1.42
SLC35A3-209ENST00000638338 KIF21BO75037 1637 aa23.9■■□□□ 1.42
SLC35A3-209ENST00000638338 CEP164Q9UPV0 1460 aa23.9■■□□□ 1.42
SLC35A3-209ENST00000638338 CUX1P39880 1505 aa23.89■■□□□ 1.41
SLC35A3-209ENST00000638338 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
SLC35A3-209ENST00000638338 UBTFP17480 764 aaKnown RBP23.87■■□□□ 1.41
SLC35A3-209ENST00000638338 RAPGEF2Q9Y4G8 1499 aa23.71■■□□□ 1.39
SLC35A3-209ENST00000638338 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
SLC35A3-209ENST00000638338 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
SLC35A3-209ENST00000638338 PRXQ9BXM0 1461 aa23.66■■□□□ 1.38
SLC35A3-209ENST00000638338 ERICH3Q5RHP9 1530 aa23.64■■□□□ 1.38
SLC35A3-209ENST00000638338 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
SLC35A3-209ENST00000638338 CLIP1P30622 1438 aa23.61■■□□□ 1.37
SLC35A3-209ENST00000638338 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
SLC35A3-209ENST00000638338 NESP48681 1621 aa23.52■■□□□ 1.36
SLC35A3-209ENST00000638338 LAMC3Q9Y6N6 1575 aa23.51■■□□□ 1.35
SLC35A3-209ENST00000638338 CUX2O14529 1486 aa23.5■■□□□ 1.35
SLC35A3-209ENST00000638338 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
SLC35A3-209ENST00000638338 VPS8Q8N3P4 1428 aa23.47■■□□□ 1.35
SLC35A3-209ENST00000638338 IGF1RP08069 1367 aa23.44■■□□□ 1.34
SLC35A3-209ENST00000638338 TOPBP1Q92547 1522 aa23.42■■□□□ 1.34
SLC35A3-209ENST00000638338 ZEB1P37275 1124 aaPredicted RBP23.42■■□□□ 1.34
SLC35A3-209ENST00000638338 TTBK1Q5TCY1 1321 aaPredicted RBP23.36■■□□□ 1.33
SLC35A3-209ENST00000638338 POLA1P09884 1462 aaPredicted RBP23.35■■□□□ 1.33
SLC35A3-209ENST00000638338 RANGAP1P46060 587 aaPredicted RBP23.35■■□□□ 1.33
SLC35A3-209ENST00000638338 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
SLC35A3-209ENST00000638338 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
SLC35A3-209ENST00000638338 CARMIL1Q5VZK9 1371 aa23.32■■□□□ 1.32
SLC35A3-209ENST00000638338 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
SLC35A3-209ENST00000638338 RAD54L2Q9Y4B4 1467 aa23.31■■□□□ 1.32
SLC35A3-209ENST00000638338 URB2Q14146 1524 aaKnown RBP23.3■■□□□ 1.32
SLC35A3-209ENST00000638338 APLP2Q06481 763 aa23.27■■□□□ 1.32
SLC35A3-209ENST00000638338 ARHGAP35Q9NRY4 1499 aa23.21■■□□□ 1.31
SLC35A3-209ENST00000638338 KIF21AQ7Z4S6 1674 aa23.2■■□□□ 1.3
SLC35A3-209ENST00000638338 WDR97A6NE52 1622 aa23.18■■□□□ 1.3
SLC35A3-209ENST00000638338 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
SLC35A3-209ENST00000638338 THOC2Q8NI27 1593 aaKnown RBP23.17■■□□□ 1.3
SLC35A3-209ENST00000638338 CUL7Q14999 1698 aa23.14■■□□□ 1.3
SLC35A3-209ENST00000638338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.12■■□□□ 1.29
SLC35A3-209ENST00000638338 ABCA5Q8WWZ7 1642 aa23.09■■□□□ 1.29
SLC35A3-209ENST00000638338 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.29
SLC35A3-209ENST00000638338 TDRD9Q8NDG6 1382 aaKnown RBP23.04■■□□□ 1.28
SLC35A3-209ENST00000638338 GAPVD1Q14C86 1478 aa23.04■■□□□ 1.28
SLC35A3-209ENST00000638338 TARBP1Q13395 1621 aaKnown RBP23.01■■□□□ 1.27
SLC35A3-209ENST00000638338 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
SLC35A3-209ENST00000638338 WDR62O43379 1518 aa23■■□□□ 1.27
SLC35A3-209ENST00000638338 KANK4Q5T7N3 995 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms