RNA–Protein interactions for RNA: ENST00000418622.7

RIC1-204, Transcript of RIC1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5 BASIC

Gene RIC1, Length 6,658 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIC1-204ENST00000418622 DCAF8L2P0C7V8 631 aa24.24■■□□□ 1.47
RIC1-204ENST00000418622 EHMT2Q96KQ7 1210 aa23.13■■□□□ 1.29
RIC1-204ENST00000418622 SUPT5HO00267 1087 aaKnown RBP23.01■■□□□ 1.27
RIC1-204ENST00000418622 SHROOM4Q9ULL8 1493 aa22.56■■□□□ 1.2
RIC1-204ENST00000418622 TTBK1Q5TCY1 1321 aaPredicted RBP22.28■■□□□ 1.16
RIC1-204ENST00000418622 FAM9AQ8IZU1 332 aaPredicted RBP21.96■■□□□ 1.11
RIC1-204ENST00000418622 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
RIC1-204ENST00000418622 PCGF6Q9BYE7 350 aa21.72■■□□□ 1.07
RIC1-204ENST00000418622 PELP1Q8IZL8 1130 aaKnown RBP21.69■■□□□ 1.06
RIC1-204ENST00000418622 APLP2Q06481 763 aa21.59■■□□□ 1.05
RIC1-204ENST00000418622 YTHDC1Q96MU7 727 aaKnown RBP21.36■■□□□ 1.01
RIC1-204ENST00000418622 ERICH6Q7L0X2 663 aa21.35■■□□□ 1.01
RIC1-204ENST00000418622 ATP1B4Q9UN42 357 aaPredicted RBP21.35■■□□□ 1.01
RIC1-204ENST00000418622 PPARGC1BQ86YN6 1023 aaKnown RBP21.28■■□□□ 1
RIC1-204ENST00000418622 MYT1Q01538 1121 aa21.18■□□□□ 0.98
RIC1-204ENST00000418622 CCER1Q8TC90 406 aaPredicted RBP21.18■□□□□ 0.98
RIC1-204ENST00000418622 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
RIC1-204ENST00000418622 CENPBP07199 599 aaPredicted RBP21.01■□□□□ 0.95
RIC1-204ENST00000418622 CNGB1Q14028 1251 aaPredicted RBP20.89■□□□□ 0.94
RIC1-204ENST00000418622 TRIM41Q8WV44 630 aa20.89■□□□□ 0.93
RIC1-204ENST00000418622 UBTFP17480 764 aaKnown RBP20.85■□□□□ 0.93
RIC1-204ENST00000418622 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
RIC1-204ENST00000418622 CHIC1Q5VXU3 224 aa20.69■□□□□ 0.9
RIC1-204ENST00000418622 NEFLP07196 543 aa20.69■□□□□ 0.9
RIC1-204ENST00000418622 ITGAEP38570 1179 aa20.68■□□□□ 0.9
RIC1-204ENST00000418622 ZEB1P37275 1124 aaPredicted RBP20.56■□□□□ 0.88
RIC1-204ENST00000418622 MYT1LQ9UL68 1186 aa20.46■□□□□ 0.87
RIC1-204ENST00000418622 LOC105371045A0A1W2PR82 267 aa20.41■□□□□ 0.86
RIC1-204ENST00000418622 HNRNPUL2Q1KMD3 747 aaKnown RBP20.36■□□□□ 0.85
RIC1-204ENST00000418622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
RIC1-204ENST00000418622 HRCP23327 699 aa20.29■□□□□ 0.84
RIC1-204ENST00000418622 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.84
RIC1-204ENST00000418622 DAXXQ9UER7 740 aaPredicted RBP20.25■□□□□ 0.83
RIC1-204ENST00000418622 TRIM26Q12899 539 aaPredicted RBP20.17■□□□□ 0.82
RIC1-204ENST00000418622 BCL11AQ9H165 835 aa20.15■□□□□ 0.82
RIC1-204ENST00000418622 BCANQ96GW7 911 aa20.11■□□□□ 0.81
RIC1-204ENST00000418622 CLSPNQ9HAW4 1339 aa19.94■□□□□ 0.78
RIC1-204ENST00000418622 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
RIC1-204ENST00000418622 DIEXFQ68CQ4 756 aaKnown RBP19.85■□□□□ 0.77
RIC1-204ENST00000418622 ZNF316A6NFI3 1004 aaPredicted RBP19.84■□□□□ 0.77
RIC1-204ENST00000418622 FAM50AQ14320 339 aaKnown RBP19.8■□□□□ 0.76
RIC1-204ENST00000418622 ZNF326Q5BKZ1 582 aaKnown RBP19.77■□□□□ 0.76
RIC1-204ENST00000418622 SLC24A1O60721 1099 aa19.76■□□□□ 0.75
RIC1-204ENST00000418622 RTL5Q5HYW3 569 aaPredicted RBP19.76■□□□□ 0.75
RIC1-204ENST00000418622 TRIM52Q96A61 297 aa19.71■□□□□ 0.75
RIC1-204ENST00000418622 GTF3C3Q9Y5Q9 886 aa19.71■□□□□ 0.75
RIC1-204ENST00000418622 ARID3CA6NKF2 412 aa19.61■□□□□ 0.73
RIC1-204ENST00000418622 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
RIC1-204ENST00000418622 NPM2Q86SE8 214 aaKnown RBP19.44■□□□□ 0.7
RIC1-204ENST00000418622 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
RIC1-204ENST00000418622 P3H3Q8IVL6 736 aa19.39■□□□□ 0.7
RIC1-204ENST00000418622 FBLN2P98095 1184 aa19.39■□□□□ 0.69
RIC1-204ENST00000418622 ANP32CO43423 234 aa19.33■□□□□ 0.69
RIC1-204ENST00000418622 CDK11AQ9UQ88 783 aaPredicted RBP19.33■□□□□ 0.69
RIC1-204ENST00000418622 CANXP27824 592 aaKnown RBP19.33■□□□□ 0.69
RIC1-204ENST00000418622 SALL2Q9Y467 1007 aaPredicted RBP19.25■□□□□ 0.67
RIC1-204ENST00000418622 ZBTB47Q9UFB7 747 aaPredicted RBP19.24■□□□□ 0.67
RIC1-204ENST00000418622 EIF5BO60841 1220 aaKnown RBP19.21■□□□□ 0.67
RIC1-204ENST00000418622 ARXQ96QS3 562 aa19.21■□□□□ 0.67
RIC1-204ENST00000418622 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
RIC1-204ENST00000418622 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
RIC1-204ENST00000418622 PLEKHG5O94827 1062 aa19.11■□□□□ 0.65
RIC1-204ENST00000418622 FKBP8Q14318 412 aa19.11■□□□□ 0.65
RIC1-204ENST00000418622 SENP3-EIF4A1A0A087X0R7 540 aa19.1■□□□□ 0.65
RIC1-204ENST00000418622 ACIN1Q9UKV3 1341 aaKnown RBP19.08■□□□□ 0.65
RIC1-204ENST00000418622 NBR1Q14596 966 aa19.06■□□□□ 0.64
RIC1-204ENST00000418622 IRX6P78412 446 aaPredicted RBP19.03■□□□□ 0.64
RIC1-204ENST00000418622 FAM9BQ8IZU0 186 aa19.03■□□□□ 0.64
RIC1-204ENST00000418622 ANP32AP39687 249 aaKnown RBP19.01■□□□□ 0.63
RIC1-204ENST00000418622 CHGAP10645 457 aaKnown RBP18.99■□□□□ 0.63
RIC1-204ENST00000418622 HIRIP3Q9BW71 556 aaPredicted RBP18.99■□□□□ 0.63
RIC1-204ENST00000418622 ABCC9O60706 1549 aa18.95■□□□□ 0.62
RIC1-204ENST00000418622 DDX10Q13206 875 aaKnown RBP18.94■□□□□ 0.62
RIC1-204ENST00000418622 A0A0G2JS52 829 aa18.93■□□□□ 0.62
RIC1-204ENST00000418622 HNRNPUQ00839 825 aaKnown RBP eCLIP18.93■□□□□ 0.62
RIC1-204ENST00000418622 NEFMP07197 916 aa18.9■□□□□ 0.62
RIC1-204ENST00000418622 HSP90AA1P07900 732 aaKnown RBP18.89■□□□□ 0.61
RIC1-204ENST00000418622 CHIC2Q9UKJ5 165 aa18.85■□□□□ 0.61
RIC1-204ENST00000418622 SCAF1Q9H7N4 1312 aaKnown RBP18.84■□□□□ 0.61
RIC1-204ENST00000418622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.65e-6■□□□□ 9.4
RIC1-204ENST00000418622 TPRNQ4KMQ1 711 aa18.79■□□□□ 0.6
RIC1-204ENST00000418622 KDM2AQ9Y2K7 1162 aa18.76■□□□□ 0.59
RIC1-204ENST00000418622 TULP1O00294 542 aaPredicted RBP18.75■□□□□ 0.59
RIC1-204ENST00000418622 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
RIC1-204ENST00000418622 STAG3Q9UJ98 1225 aa18.74■□□□□ 0.59
RIC1-204ENST00000418622 CCDC136Q96JN2 1154 aa18.67■□□□□ 0.58
RIC1-204ENST00000418622 ANP32BQ92688 251 aaKnown RBP18.66■□□□□ 0.58
RIC1-204ENST00000418622 TAOK2Q9UL54 1235 aa18.66■□□□□ 0.58
RIC1-204ENST00000418622 TONSLQ96HA7 1378 aa18.65■□□□□ 0.58
RIC1-204ENST00000418622 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
RIC1-204ENST00000418622 MIER1Q8N108 512 aa18.63■□□□□ 0.57
RIC1-204ENST00000418622 ESF1Q9H501 851 aaKnown RBP18.61■□□□□ 0.57
RIC1-204ENST00000418622 TMC1Q8TDI8 760 aa18.6■□□□□ 0.57
RIC1-204ENST00000418622 UPF2Q9HAU5 1272 aaKnown RBP18.58■□□□□ 0.56
RIC1-204ENST00000418622 MRS2Q9HD23 443 aa18.57■□□□□ 0.56
RIC1-204ENST00000418622 RTN4Q9NQC3 1192 aaKnown RBP18.53■□□□□ 0.56
RIC1-204ENST00000418622 WDR43Q15061 677 aaKnown RBP eCLIP18.49■□□□□ 0.55
RIC1-204ENST00000418622 C14orf37Q86TY3 774 aa18.49■□□□□ 0.55
RIC1-204ENST00000418622 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
RIC1-204ENST00000418622 RRP7BPQ9NSQ0 103 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms