Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 SUPT20HL1-201ENST00000436466 2618 ntBASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 CLN8-201ENST00000331222 7169 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 RIMS2-207ENST00000504942 4228 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 AC087741.1-201ENST00000570309 4399 ntBASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 TNRC18P1-201ENST00000502875 3650 ntBASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 MIPEPP3-201ENST00000412105 444 ntBASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 RPS2P4-201ENST00000476944 856 ntBASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 AP000692.2-201ENST00000608391 879 ntBASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 CR769767.2-201ENST00000622735 460 ntBASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 AC092865.7-201ENST00000641832 219 ntBASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 AL645937.6-201ENST00000641122 3727 ntBASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 MUC6-201ENST00000421673 8006 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 AL135999.2-201ENST00000622438 1686 ntBASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 SCN4B-201ENST00000324727 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 MYH13-201ENST00000252172 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 ZAN-206ENST00000618565 8651 ntAPPRIS P4 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 C4orf50-201ENST00000324058 5201 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 BOC-215ENST00000495514 4646 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 SAR1B-201ENST00000402673 6682 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 DOCK10-201ENST00000258390 7260 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms