RNA–Protein interactions for RNA: ENST00000324058.9

C4orf50-201, Transcript of chromosome 4 open reading frame 50, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C4orf50, Length 5,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf50-201ENST00000324058 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
C4orf50-201ENST00000324058 NISCHQ9Y2I1 1504 aa19.11■□□□□ 0.65
C4orf50-201ENST00000324058 SUPT5HO00267 1087 aaKnown RBP19.03■□□□□ 0.64
C4orf50-201ENST00000324058 SHROOM4Q9ULL8 1493 aa18.68■□□□□ 0.58
C4orf50-201ENST00000324058 EHMT2Q96KQ7 1210 aa18.36■□□□□ 0.53
C4orf50-201ENST00000324058 FAM9AQ8IZU1 332 aaPredicted RBP17.94■□□□□ 0.46
C4orf50-201ENST00000324058 APLP2Q06481 763 aa17.93■□□□□ 0.46
C4orf50-201ENST00000324058 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
C4orf50-201ENST00000324058 PCGF6Q9BYE7 350 aa17.89■□□□□ 0.46
C4orf50-201ENST00000324058 TTBK1Q5TCY1 1321 aaPredicted RBP17.76■□□□□ 0.43
C4orf50-201ENST00000324058 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
C4orf50-201ENST00000324058 ZEB1P37275 1124 aaPredicted RBP17.54■□□□□ 0.4
C4orf50-201ENST00000324058 RANGAP1P46060 587 aaPredicted RBP17.5■□□□□ 0.39
C4orf50-201ENST00000324058 CCER1Q8TC90 406 aaPredicted RBP17.49■□□□□ 0.39
C4orf50-201ENST00000324058 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
C4orf50-201ENST00000324058 UBTFP17480 764 aaKnown RBP17.35■□□□□ 0.37
C4orf50-201ENST00000324058 ATP1B4Q9UN42 357 aaPredicted RBP17.29■□□□□ 0.36
C4orf50-201ENST00000324058 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
C4orf50-201ENST00000324058 PPARGC1BQ86YN6 1023 aaKnown RBP17.18■□□□□ 0.34
C4orf50-201ENST00000324058 YTHDC1Q96MU7 727 aaKnown RBP17.13■□□□□ 0.33
C4orf50-201ENST00000324058 TRIM26Q12899 539 aaPredicted RBP17.12■□□□□ 0.33
C4orf50-201ENST00000324058 HRCP23327 699 aa17.04■□□□□ 0.32
C4orf50-201ENST00000324058 NEFLP07196 543 aa17.03■□□□□ 0.32
C4orf50-201ENST00000324058 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
C4orf50-201ENST00000324058 LOC105371045A0A1W2PR82 267 aa16.99■□□□□ 0.31
C4orf50-201ENST00000324058 ITGAEP38570 1179 aa16.82■□□□□ 0.28
C4orf50-201ENST00000324058 MYT1Q01538 1121 aa16.78■□□□□ 0.28
C4orf50-201ENST00000324058 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
C4orf50-201ENST00000324058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.63■□□□□ 0.25
C4orf50-201ENST00000324058 POLR3GLQ9BT43 218 aa16.63■□□□□ 0.25
C4orf50-201ENST00000324058 DIEXFQ68CQ4 756 aaKnown RBP16.54■□□□□ 0.24
C4orf50-201ENST00000324058 CNGB1Q14028 1251 aaPredicted RBP16.5■□□□□ 0.23
C4orf50-201ENST00000324058 MYT1LQ9UL68 1186 aa16.5■□□□□ 0.23
C4orf50-201ENST00000324058 DAXXQ9UER7 740 aaPredicted RBP16.45■□□□□ 0.22
C4orf50-201ENST00000324058 FAM50AQ14320 339 aaKnown RBP16.37■□□□□ 0.21
C4orf50-201ENST00000324058 PABPN1Q86U42 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
C4orf50-201ENST00000324058 ABCC9O60706 1549 aa16.32■□□□□ 0.2
C4orf50-201ENST00000324058 NEUROD1Q13562 356 aa16.28■□□□□ 0.2
C4orf50-201ENST00000324058 TRIM52Q96A61 297 aa16.26■□□□□ 0.19
C4orf50-201ENST00000324058 GTF3C3Q9Y5Q9 886 aa16.23■□□□□ 0.19
C4orf50-201ENST00000324058 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
C4orf50-201ENST00000324058 BCANQ96GW7 911 aa16.17■□□□□ 0.18
C4orf50-201ENST00000324058 ZNF316A6NFI3 1004 aaPredicted RBP16.16■□□□□ 0.18
C4orf50-201ENST00000324058 RTL5Q5HYW3 569 aaPredicted RBP16.15■□□□□ 0.18
C4orf50-201ENST00000324058 CLSPNQ9HAW4 1339 aa16.14■□□□□ 0.17
C4orf50-201ENST00000324058 ANP32CO43423 234 aa16.13■□□□□ 0.17
C4orf50-201ENST00000324058 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
C4orf50-201ENST00000324058 ZNF326Q5BKZ1 582 aaKnown RBP16.08■□□□□ 0.16
C4orf50-201ENST00000324058 ACIN1Q9UKV3 1341 aaKnown RBP16.02■□□□□ 0.16
C4orf50-201ENST00000324058 P3H3Q8IVL6 736 aa15.99■□□□□ 0.15
C4orf50-201ENST00000324058 CDK11AQ9UQ88 783 aaPredicted RBP15.99■□□□□ 0.15
C4orf50-201ENST00000324058 FBLN2P98095 1184 aa15.93■□□□□ 0.14
C4orf50-201ENST00000324058 ARID3CA6NKF2 412 aa15.9■□□□□ 0.14
C4orf50-201ENST00000324058 DCAF1Q9Y4B6 1507 aa15.87■□□□□ 0.13
C4orf50-201ENST00000324058 ZCCHC6Q5VYS8 1495 aaKnown RBP15.83■□□□□ 0.12
C4orf50-201ENST00000324058 SCRIBQ14160 1630 aa15.8■□□□□ 0.12
C4orf50-201ENST00000324058 ZNF777Q9ULD5 760 aaPredicted RBP15.79■□□□□ 0.12
C4orf50-201ENST00000324058 CANXP27824 592 aaKnown RBP15.77■□□□□ 0.12
C4orf50-201ENST00000324058 ZBTB47Q9UFB7 747 aaPredicted RBP15.77■□□□□ 0.11
C4orf50-201ENST00000324058 TONSLQ96HA7 1378 aa15.74■□□□□ 0.11
C4orf50-201ENST00000324058 FKBP8Q14318 412 aa15.73■□□□□ 0.11
C4orf50-201ENST00000324058 DDX10Q13206 875 aaKnown RBP15.71■□□□□ 0.11
C4orf50-201ENST00000324058 ANP32AP39687 249 aaKnown RBP15.71■□□□□ 0.1
C4orf50-201ENST00000324058 BCL11AQ9H165 835 aa15.68■□□□□ 0.1
C4orf50-201ENST00000324058 HNRNPUQ00839 825 aaKnown RBP eCLIP15.67■□□□□ 0.1
C4orf50-201ENST00000324058 NEFMP07197 916 aa15.66■□□□□ 0.1
C4orf50-201ENST00000324058 NPM2Q86SE8 214 aaKnown RBP15.65■□□□□ 0.1
C4orf50-201ENST00000324058 FAM9BQ8IZU0 186 aa15.62■□□□□ 0.09
C4orf50-201ENST00000324058 SLC24A1O60721 1099 aa15.61■□□□□ 0.09
C4orf50-201ENST00000324058 CHIC2Q9UKJ5 165 aa15.59■□□□□ 0.09
C4orf50-201ENST00000324058 MIER1Q8N108 512 aa15.55■□□□□ 0.08
C4orf50-201ENST00000324058 MYO15BQ96JP2 1530 aa15.55■□□□□ 0.08
C4orf50-201ENST00000324058 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
C4orf50-201ENST00000324058 SALL2Q9Y467 1007 aaPredicted RBP15.53■□□□□ 0.08
C4orf50-201ENST00000324058 CLIP1P30622 1438 aa15.53■□□□□ 0.08
C4orf50-201ENST00000324058 CHGAP10645 457 aaKnown RBP15.51■□□□□ 0.07
C4orf50-201ENST00000324058 TMC1Q8TDI8 760 aa15.5■□□□□ 0.07
C4orf50-201ENST00000324058 MTUS2Q5JR59 1369 aa15.47■□□□□ 0.07
C4orf50-201ENST00000324058 MRS2Q9HD23 443 aa15.47■□□□□ 0.07
C4orf50-201ENST00000324058 CCDC136Q96JN2 1154 aa15.47■□□□□ 0.07
C4orf50-201ENST00000324058 HIRIP3Q9BW71 556 aaPredicted RBP15.47■□□□□ 0.07
C4orf50-201ENST00000324058 CCDC180Q9P1Z9 1646 aa15.46■□□□□ 0.07
C4orf50-201ENST00000324058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.45■□□□□ 0.06
C4orf50-201ENST00000324058 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
C4orf50-201ENST00000324058 KDM2AQ9Y2K7 1162 aa15.42■□□□□ 0.06
C4orf50-201ENST00000324058 CEP162Q5TB80 1403 aa15.42■□□□□ 0.06
C4orf50-201ENST00000324058 TSPY4P0CV99 314 aa15.41■□□□□ 0.06
C4orf50-201ENST00000324058 TSPY10P0CW01 314 aa15.41■□□□□ 0.06
C4orf50-201ENST00000324058 UPF2Q9HAU5 1272 aaKnown RBP15.41■□□□□ 0.06
C4orf50-201ENST00000324058 IRX6P78412 446 aaPredicted RBP15.4■□□□□ 0.06
C4orf50-201ENST00000324058 STAG3Q9UJ98 1225 aa15.4■□□□□ 0.06
C4orf50-201ENST00000324058 HSP90AA1P07900 732 aaKnown RBP15.39■□□□□ 0.05
C4orf50-201ENST00000324058 EEA1Q15075 1411 aa15.39■□□□□ 0.05
C4orf50-201ENST00000324058 ESF1Q9H501 851 aaKnown RBP15.39■□□□□ 0.05
C4orf50-201ENST00000324058 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
C4orf50-201ENST00000324058 EIF4G2P78344 907 aaKnown RBP eCLIP15.38■□□□□ 0.05
C4orf50-201ENST00000324058 RRP7BPQ9NSQ0 103 aa15.37■□□□□ 0.05
C4orf50-201ENST00000324058 WDR43Q15061 677 aaKnown RBP eCLIP15.37■□□□□ 0.05
C4orf50-201ENST00000324058 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.37■□□□□ 0.05
C4orf50-201ENST00000324058 NBR1Q14596 966 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms