RNA–Protein interactions for RNA: ENST00000307588.7

CCDC110-201, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC110, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-201ENST00000307588 NISCHQ9Y2I1 1504 aa36.82■■■■□ 3.49
CCDC110-201ENST00000307588 CCDC180Q9P1Z9 1646 aa31.94■■■□□ 2.7
CCDC110-201ENST00000307588 ZCCHC6Q5VYS8 1495 aaKnown RBP30.97■■■□□ 2.55
CCDC110-201ENST00000307588 DCAF1Q9Y4B6 1507 aa30.4■■■□□ 2.46
CCDC110-201ENST00000307588 DCAF8L2P0C7V8 631 aa30.35■■■□□ 2.45
CCDC110-201ENST00000307588 SHROOM4Q9ULL8 1493 aa30.23■■■□□ 2.43
CCDC110-201ENST00000307588 ABCC9O60706 1549 aa30.13■■■□□ 2.41
CCDC110-201ENST00000307588 MYO15BQ96JP2 1530 aa29.95■■■□□ 2.39
CCDC110-201ENST00000307588 NACADO15069 1562 aa29.72■■■□□ 2.35
CCDC110-201ENST00000307588 SCRIBQ14160 1630 aa29.48■■■□□ 2.31
CCDC110-201ENST00000307588 RB1CC1Q8TDY2 1594 aa29.41■■■□□ 2.3
CCDC110-201ENST00000307588 SUPT5HO00267 1087 aaKnown RBP29.14■■■□□ 2.26
CCDC110-201ENST00000307588 UNC13AQ9UPW8 1703 aa28.92■■■□□ 2.22
CCDC110-201ENST00000307588 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
CCDC110-201ENST00000307588 CECR2Q9BXF3 1484 aa28.67■■■□□ 2.18
CCDC110-201ENST00000307588 BICRAQ9NZM4 1560 aa28.64■■■□□ 2.18
CCDC110-201ENST00000307588 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
CCDC110-201ENST00000307588 PABPN1Q86U42 306 aaKnown RBP eCLIP28.49■■■□□ 2.15
CCDC110-201ENST00000307588 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
CCDC110-201ENST00000307588 WIZO95785 1651 aa28.27■■■□□ 2.12
CCDC110-201ENST00000307588 SMARCA4P51532 1647 aa28.26■■■□□ 2.11
CCDC110-201ENST00000307588 CHIC1Q5VXU3 224 aa28.02■■■□□ 2.08
CCDC110-201ENST00000307588 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
CCDC110-201ENST00000307588 PEG3Q9GZU2 1588 aa27.89■■■□□ 2.06
CCDC110-201ENST00000307588 ATAD2BQ9ULI0 1458 aa27.77■■■□□ 2.04
CCDC110-201ENST00000307588 EIF4G1Q04637 1599 aaKnown RBP27.71■■■□□ 2.03
CCDC110-201ENST00000307588 SMARCA2P51531 1590 aa27.7■■■□□ 2.03
CCDC110-201ENST00000307588 CCDC88BA6NC98 1476 aa27.69■■■□□ 2.02
CCDC110-201ENST00000307588 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
CCDC110-201ENST00000307588 NCAPD3P42695 1498 aa27.47■■□□□ 1.99
CCDC110-201ENST00000307588 HMGXB3Q12766 1538 aa27.42■■□□□ 1.98
CCDC110-201ENST00000307588 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
CCDC110-201ENST00000307588 CC2D2AQ9P2K1 1620 aa27.26■■□□□ 1.95
CCDC110-201ENST00000307588 ABCC8Q09428 1581 aa27.19■■□□□ 1.94
CCDC110-201ENST00000307588 LOC105371045A0A1W2PR82 267 aa27■■□□□ 1.91
CCDC110-201ENST00000307588 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
CCDC110-201ENST00000307588 CFTRP13569 1480 aa26.93■■□□□ 1.9
CCDC110-201ENST00000307588 FAM9AQ8IZU1 332 aaPredicted RBP26.91■■□□□ 1.9
CCDC110-201ENST00000307588 SYNJ1O43426 1573 aa26.86■■□□□ 1.89
CCDC110-201ENST00000307588 CADPSQ9ULU8 1353 aa26.78■■□□□ 1.88
CCDC110-201ENST00000307588 PRDM2Q13029 1718 aa26.74■■□□□ 1.87
CCDC110-201ENST00000307588 SOGA1O94964 1423 aa26.73■■□□□ 1.87
CCDC110-201ENST00000307588 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
CCDC110-201ENST00000307588 DNAJC5BQ9UF47 199 aa26.68■■□□□ 1.86
CCDC110-201ENST00000307588 BIVM-ERCC5R4GMW8 1640 aa26.66■■□□□ 1.86
CCDC110-201ENST00000307588 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
CCDC110-201ENST00000307588 CUX1P39880 1505 aa26.63■■□□□ 1.85
CCDC110-201ENST00000307588 EEA1Q15075 1411 aa26.58■■□□□ 1.85
CCDC110-201ENST00000307588 NESP48681 1621 aa26.56■■□□□ 1.84
CCDC110-201ENST00000307588 EHMT2Q96KQ7 1210 aa26.55■■□□□ 1.84
CCDC110-201ENST00000307588 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
CCDC110-201ENST00000307588 CSRNP3Q8WYN3 585 aa26.48■■□□□ 1.83
CCDC110-201ENST00000307588 LAMC3Q9Y6N6 1575 aa26.47■■□□□ 1.83
CCDC110-201ENST00000307588 KIF21BO75037 1637 aa26.28■■□□□ 1.8
CCDC110-201ENST00000307588 FGD5Q6ZNL6 1462 aa26.27■■□□□ 1.8
CCDC110-201ENST00000307588 CEP164Q9UPV0 1460 aa26.27■■□□□ 1.8
CCDC110-201ENST00000307588 DNMBPQ6XZF7 1577 aa26.26■■□□□ 1.8
CCDC110-201ENST00000307588 GOLGA3Q08378 1498 aa26.26■■□□□ 1.79
CCDC110-201ENST00000307588 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
CCDC110-201ENST00000307588 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
CCDC110-201ENST00000307588 TNIKQ9UKE5 1360 aa26.24■■□□□ 1.79
CCDC110-201ENST00000307588 KIF27Q86VH2 1401 aa26.2■■□□□ 1.79
CCDC110-201ENST00000307588 URB2Q14146 1524 aaKnown RBP26.19■■□□□ 1.78
CCDC110-201ENST00000307588 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
CCDC110-201ENST00000307588 RAPGEF2Q9Y4G8 1499 aa26.16■■□□□ 1.78
CCDC110-201ENST00000307588 UBTFP17480 764 aaKnown RBP26.14■■□□□ 1.77
CCDC110-201ENST00000307588 PRXQ9BXM0 1461 aa26.14■■□□□ 1.77
CCDC110-201ENST00000307588 CEP162Q5TB80 1403 aa26.13■■□□□ 1.77
CCDC110-201ENST00000307588 CUX2O14529 1486 aa26.13■■□□□ 1.77
CCDC110-201ENST00000307588 POLA1P09884 1462 aaPredicted RBP26.13■■□□□ 1.77
CCDC110-201ENST00000307588 RAD54L2Q9Y4B4 1467 aa26.08■■□□□ 1.77
CCDC110-201ENST00000307588 ERICH3Q5RHP9 1530 aa26.05■■□□□ 1.76
CCDC110-201ENST00000307588 ABCA10Q8WWZ4 1543 aa26.03■■□□□ 1.76
CCDC110-201ENST00000307588 IGF1RP08069 1367 aa26.03■■□□□ 1.76
CCDC110-201ENST00000307588 WDR97A6NE52 1622 aa25.94■■□□□ 1.74
CCDC110-201ENST00000307588 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
CCDC110-201ENST00000307588 PCGF6Q9BYE7 350 aa25.89■■□□□ 1.74
CCDC110-201ENST00000307588 CLIP1P30622 1438 aa25.87■■□□□ 1.73
CCDC110-201ENST00000307588 CARMIL1Q5VZK9 1371 aa25.86■■□□□ 1.73
CCDC110-201ENST00000307588 TARBP1Q13395 1621 aaKnown RBP25.84■■□□□ 1.73
CCDC110-201ENST00000307588 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
CCDC110-201ENST00000307588 WDR62O43379 1518 aa25.8■■□□□ 1.72
CCDC110-201ENST00000307588 TRIM26Q12899 539 aaPredicted RBP25.8■■□□□ 1.72
CCDC110-201ENST00000307588 TDRD9Q8NDG6 1382 aaKnown RBP25.8■■□□□ 1.72
CCDC110-201ENST00000307588 ERCC6Q03468 1493 aa25.74■■□□□ 1.71
CCDC110-201ENST00000307588 GAPVD1Q14C86 1478 aa25.74■■□□□ 1.71
CCDC110-201ENST00000307588 RANGAP1P46060 587 aaPredicted RBP25.72■■□□□ 1.71
CCDC110-201ENST00000307588 CUL7Q14999 1698 aa25.72■■□□□ 1.71
CCDC110-201ENST00000307588 PPARGC1BQ86YN6 1023 aaKnown RBP25.72■■□□□ 1.71
CCDC110-201ENST00000307588 THOC2Q8NI27 1593 aaKnown RBP25.7■■□□□ 1.71
CCDC110-201ENST00000307588 VPS8Q8N3P4 1428 aa25.67■■□□□ 1.7
CCDC110-201ENST00000307588 ARAP1Q96P48 1450 aa25.65■■□□□ 1.7
CCDC110-201ENST00000307588 IFT140Q96RY7 1462 aa25.63■■□□□ 1.69
CCDC110-201ENST00000307588 AQRO60306 1485 aaKnown RBP eCLIP25.61■■□□□ 1.69
CCDC110-201ENST00000307588 ARHGAP35Q9NRY4 1499 aa25.6■■□□□ 1.69
CCDC110-201ENST00000307588 ZNF608Q9ULD9 1512 aaPredicted RBP25.58■■□□□ 1.68
CCDC110-201ENST00000307588 PBRM1Q86U86 1689 aa25.57■■□□□ 1.68
CCDC110-201ENST00000307588 GRIN2BQ13224 1484 aa25.49■■□□□ 1.67
CCDC110-201ENST00000307588 CTTNBP2Q8WZ74 1663 aa25.48■■□□□ 1.67
CCDC110-201ENST00000307588 ADAMTS12P58397 1594 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms